RNA–Protein interactions for RNA: ENST00000570798.5

LITAF-204, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-204ENST00000570798 VPS8Q8N3P4 1428 aa28.81■■■□□ 2.2
LITAF-204ENST00000570798 ARHGAP5Q13017 1502 aa28.79■■■□□ 2.2
LITAF-204ENST00000570798 AEBP2Q6ZN18 517 aaPredicted RBP28.79■■■□□ 2.2
LITAF-204ENST00000570798 SCAPERQ9BY12 1400 aa28.77■■■□□ 2.2
LITAF-204ENST00000570798 ZMYM4Q5VZL5 1548 aa28.76■■■□□ 2.19
LITAF-204ENST00000570798 MTUS2Q5JR59 1369 aa28.75■■■□□ 2.19
LITAF-204ENST00000570798 EHBP1L1Q8N3D4 1523 aa28.74■■■□□ 2.19
LITAF-204ENST00000570798 POGZQ7Z3K3 1410 aa28.73■■■□□ 2.19
LITAF-204ENST00000570798 TIAM1Q13009 1591 aa28.71■■■□□ 2.19
LITAF-204ENST00000570798 GPATCH8Q9UKJ3 1502 aaKnown RBP28.7■■■□□ 2.19
LITAF-204ENST00000570798 ARHGEF40Q8TER5 1519 aa28.69■■■□□ 2.18
LITAF-204ENST00000570798 MAGI2Q86UL8 1455 aa28.67■■■□□ 2.18
LITAF-204ENST00000570798 ABCC1P33527 1531 aa28.66■■■□□ 2.18
LITAF-204ENST00000570798 ITSN2Q9NZM3 1697 aa28.64■■■□□ 2.18
LITAF-204ENST00000570798 ZNF518AQ6AHZ1 1483 aa28.64■■■□□ 2.17
LITAF-204ENST00000570798 ZFYVE16Q7Z3T8 1539 aa28.64■■■□□ 2.17
LITAF-204ENST00000570798 KDM5CP41229 1560 aa28.63■■■□□ 2.17
LITAF-204ENST00000570798 MAP3K1Q13233 1512 aa28.63■■■□□ 2.17
LITAF-204ENST00000570798 ARHGEF12Q9NZN5 1544 aa28.63■■■□□ 2.17
LITAF-204ENST00000570798 CCNB3Q8WWL7 1395 aa28.62■■■□□ 2.17
LITAF-204ENST00000570798 SAMD9LQ8IVG5 1584 aa28.62■■■□□ 2.17
LITAF-204ENST00000570798 YEATS2Q9ULM3 1422 aa28.61■■■□□ 2.17
LITAF-204ENST00000570798 SUPT6HQ7KZ85 1726 aaKnown RBP28.6■■■□□ 2.17
LITAF-204ENST00000570798 AFAP1Q8N556 730 aa28.58■■■□□ 2.17
LITAF-204ENST00000570798 LRRC9Q6ZRR7 1453 aa28.57■■■□□ 2.16
LITAF-204ENST00000570798 TRAPPC8Q9Y2L5 1435 aa28.56■■■□□ 2.16
LITAF-204ENST00000570798 SIGLEC1Q9BZZ2 1709 aa28.55■■■□□ 2.16
LITAF-204ENST00000570798 NCOA2Q15596 1464 aa28.55■■■□□ 2.16
LITAF-204ENST00000570798 CFDP1Q9UEE9 299 aaPredicted RBP28.55■■■□□ 2.16
LITAF-204ENST00000570798 BCORL1Q5H9F3 1711 aa28.55■■■□□ 2.16
LITAF-204ENST00000570798 ZNF777Q9ULD5 760 aaPredicted RBP28.54■■■□□ 2.16
LITAF-204ENST00000570798 ADAMTSL3P82987 1691 aa28.54■■■□□ 2.16
LITAF-204ENST00000570798 HECW2Q9P2P5 1572 aa28.54■■■□□ 2.16
LITAF-204ENST00000570798 SYCP2Q9BX26 1530 aa28.52■■■□□ 2.16
LITAF-204ENST00000570798 MLH3Q9UHC1 1453 aa28.52■■■□□ 2.16
LITAF-204ENST00000570798 KIAA1107Q9UPP5 1409 aa28.51■■■□□ 2.15
LITAF-204ENST00000570798 ATP10AO60312 1499 aa28.5■■■□□ 2.15
LITAF-204ENST00000570798 PLEKHH2Q8IVE3 1493 aa28.5■■■□□ 2.15
LITAF-204ENST00000570798 KANK4Q5T7N3 995 aaPredicted RBP28.49■■■□□ 2.15
LITAF-204ENST00000570798 KIDINS220Q9ULH0 1771 aa28.47■■■□□ 2.15
LITAF-204ENST00000570798 ARID4BQ4LE39 1312 aaPredicted RBP28.46■■■□□ 2.15
LITAF-204ENST00000570798 DIP2CQ9Y2E4 1556 aa28.46■■■□□ 2.15
LITAF-204ENST00000570798 C9orf84Q5VXU9 1444 aa28.45■■■□□ 2.15
LITAF-204ENST00000570798 ABCA6Q8N139 1617 aa28.45■■■□□ 2.14
LITAF-204ENST00000570798 HNRNPMP52272 730 aaKnown RBP eCLIP28.45■■■□□ 2.141e-6■■■□□ 15.6
LITAF-204ENST00000570798 ZNF644Q9H582 1327 aaPredicted RBP28.43■■■□□ 2.14
LITAF-204ENST00000570798 REREQ9P2R6 1566 aa28.42■■■□□ 2.14
LITAF-204ENST00000570798 MADDQ8WXG6 1647 aa28.4■■■□□ 2.14
LITAF-204ENST00000570798 MBD5Q9P267 1494 aa28.4■■■□□ 2.14
LITAF-204ENST00000570798 MYT1LQ9UL68 1186 aa28.39■■■□□ 2.14
LITAF-204ENST00000570798 APLP2Q06481 763 aa28.38■■■□□ 2.13
LITAF-204ENST00000570798 INO80Q9ULG1 1556 aaPredicted RBP28.36■■■□□ 2.13
LITAF-204ENST00000570798 CAMSAP2Q08AD1 1489 aa28.35■■■□□ 2.13
LITAF-204ENST00000570798 SPAG9O60271 1321 aaKnown RBP28.35■■■□□ 2.13
LITAF-204ENST00000570798 PTPRMP28827 1452 aa28.34■■■□□ 2.13
LITAF-204ENST00000570798 ATP7AQ04656 1500 aa28.34■■■□□ 2.13
LITAF-204ENST00000570798 RIMS1Q86UR5 1692 aaKnown RBP28.32■■■□□ 2.12
LITAF-204ENST00000570798 AGLP35573 1532 aa28.32■■■□□ 2.12
LITAF-204ENST00000570798 MYOM3Q5VTT5 1437 aa28.3■■■□□ 2.12
LITAF-204ENST00000570798 FER1L4A9Z1Z3 1794 aa28.29■■■□□ 2.12
LITAF-204ENST00000570798 MIA2Q96PC5 1412 aa28.28■■■□□ 2.12
LITAF-204ENST00000570798 MLECQ14165 292 aa28.27■■■□□ 2.12
LITAF-204ENST00000570798 ARHGEF5Q12774 1597 aa28.27■■■□□ 2.12
LITAF-204ENST00000570798 RSPH4AQ5TD94 716 aa28.26■■■□□ 2.11
LITAF-204ENST00000570798 CCDC141Q6ZP82 1450 aa28.26■■■□□ 2.11
LITAF-204ENST00000570798 RTEL1-TNFRSF6BF6WH68 1400 aa28.26■■■□□ 2.11
LITAF-204ENST00000570798 ADGBQ8N7X0 1667 aa28.23■■■□□ 2.11
LITAF-204ENST00000570798 PLXNC1O60486 1568 aa28.22■■■□□ 2.11
LITAF-204ENST00000570798 A2MP01023 1474 aa28.2■■■□□ 2.1
LITAF-204ENST00000570798 PTPN23Q9H3S7 1636 aa28.15■■■□□ 2.1
LITAF-204ENST00000570798 MAST1Q9Y2H9 1570 aa28.14■■■□□ 2.1
LITAF-204ENST00000570798 FGD6Q6ZV73 1430 aa28.11■■■□□ 2.09
LITAF-204ENST00000570798 TSPY4P0CV99 314 aa28.11■■■□□ 2.09
LITAF-204ENST00000570798 TSPY10P0CW01 314 aa28.11■■■□□ 2.09
LITAF-204ENST00000570798 TCOF1Q13428 1488 aaKnown RBP28.1■■■□□ 2.09
LITAF-204ENST00000570798 DHX29Q7Z478 1369 aaKnown RBP28.09■■■□□ 2.09
LITAF-204ENST00000570798 CROCC2H7BZ55 1655 aa28.06■■■□□ 2.08
LITAF-204ENST00000570798 C3P01024 1663 aa28.05■■■□□ 2.08
LITAF-204ENST00000570798 MROH2AA6NES4 1674 aa28.03■■■□□ 2.08
LITAF-204ENST00000570798 DNMT1P26358 1616 aaKnown RBP28.03■■■□□ 2.08
LITAF-204ENST00000570798 CNTLNQ9NXG0 1405 aa28.02■■■□□ 2.08
LITAF-204ENST00000570798 CEBPAP49715 358 aaPredicted RBP28.02■■■□□ 2.08
LITAF-204ENST00000570798 PLPPR3Q6T4P5 718 aa28.02■■■□□ 2.08
LITAF-204ENST00000570798 ABCC5O15440 1437 aa28.01■■■□□ 2.08
LITAF-204ENST00000570798 LMTK3Q96Q04 1460 aa28■■■□□ 2.07
LITAF-204ENST00000570798 SHANK2Q9UPX8 1470 aa28■■■□□ 2.07
LITAF-204ENST00000570798 ESF1Q9H501 851 aaKnown RBP27.99■■■□□ 2.07
LITAF-204ENST00000570798 CLTCQ00610 1675 aaKnown RBP27.99■■■□□ 2.07
LITAF-204ENST00000570798 SETD1BQ9UPS6 1966 aaKnown RBP27.99■■■□□ 2.07
LITAF-204ENST00000570798 DAPK1P53355 1430 aa27.98■■■□□ 2.07
LITAF-204ENST00000570798 GGT6Q6P531 493 aa27.97■■■□□ 2.07
LITAF-204ENST00000570798 PPP6R1Q9UPN7 881 aa27.97■■■□□ 2.07
LITAF-204ENST00000570798 PREX1Q8TCU6 1659 aa27.95■■■□□ 2.07
LITAF-204ENST00000570798 KIF3BO15066 747 aa27.94■■■□□ 2.06
LITAF-204ENST00000570798 EIF2AK4Q9P2K8 1649 aaKnown RBP27.92■■■□□ 2.06
LITAF-204ENST00000570798 ZMYM3Q14202 1370 aa27.91■■■□□ 2.06
LITAF-204ENST00000570798 DUOX2Q9NRD8 1548 aa27.9■■■□□ 2.06
LITAF-204ENST00000570798 RNF17Q9BXT8 1623 aaKnown RBP27.89■■■□□ 2.06
LITAF-204ENST00000570798 FAM135AQ9P2D6 1515 aa27.88■■■□□ 2.05
LITAF-204ENST00000570798 PPARGC1BQ86YN6 1023 aaKnown RBP27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms