RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 YEATS2Q9ULM3 1422 aa8.71□□□□□ -1.01
CHD3-212ENST00000570758 ARHGAP5Q13017 1502 aa8.71□□□□□ -1.01
CHD3-212ENST00000570758 ZMYM4Q5VZL5 1548 aa8.71□□□□□ -1.01
CHD3-212ENST00000570758 ARHGEF40Q8TER5 1519 aa8.71□□□□□ -1.01
CHD3-212ENST00000570758 ZFYVE16Q7Z3T8 1539 aa8.7□□□□□ -1.02
CHD3-212ENST00000570758 PREX2Q70Z35 1606 aa8.69□□□□□ -1.02
CHD3-212ENST00000570758 CDC42BPBQ9Y5S2 1711 aa8.69□□□□□ -1.02
CHD3-212ENST00000570758 ADAMTSL3P82987 1691 aa8.69□□□□□ -1.02
CHD3-212ENST00000570758 ARID4BQ4LE39 1312 aaPredicted RBP8.68□□□□□ -1.02
CHD3-212ENST00000570758 MAGI2Q86UL8 1455 aa8.68□□□□□ -1.02
CHD3-212ENST00000570758 ARHGEF12Q9NZN5 1544 aa8.68□□□□□ -1.02
CHD3-212ENST00000570758 SIGLEC1Q9BZZ2 1709 aa8.68□□□□□ -1.02
CHD3-212ENST00000570758 BCORL1Q5H9F3 1711 aa8.67□□□□□ -1.02
CHD3-212ENST00000570758 MTUS2Q5JR59 1369 aa8.67□□□□□ -1.02
CHD3-212ENST00000570758 CDC42BPAQ5VT25 1732 aa8.67□□□□□ -1.02
CHD3-212ENST00000570758 AFAP1Q8N556 730 aa8.67□□□□□ -1.02
CHD3-212ENST00000570758 GPATCH8Q9UKJ3 1502 aaKnown RBP8.67□□□□□ -1.02
CHD3-212ENST00000570758 TRAPPC8Q9Y2L5 1435 aa8.67□□□□□ -1.02
CHD3-212ENST00000570758 KDM5CP41229 1560 aa8.66□□□□□ -1.02
CHD3-212ENST00000570758 ABCC1P33527 1531 aa8.66□□□□□ -1.02
CHD3-212ENST00000570758 ZNF518AQ6AHZ1 1483 aa8.66□□□□□ -1.02
CHD3-212ENST00000570758 MADDQ8WXG6 1647 aa8.65□□□□□ -1.03
CHD3-212ENST00000570758 SAMD9LQ8IVG5 1584 aa8.65□□□□□ -1.03
CHD3-212ENST00000570758 EHBP1L1Q8N3D4 1523 aa8.64□□□□□ -1.03
CHD3-212ENST00000570758 ATP10AO60312 1499 aa8.64□□□□□ -1.03
CHD3-212ENST00000570758 PTPRMP28827 1452 aa8.64□□□□□ -1.03
CHD3-212ENST00000570758 VPS8Q8N3P4 1428 aa8.64□□□□□ -1.03
CHD3-212ENST00000570758 CCNB3Q8WWL7 1395 aa8.64□□□□□ -1.03
CHD3-212ENST00000570758 ZNF777Q9ULD5 760 aaPredicted RBP8.64□□□□□ -1.03
CHD3-212ENST00000570758 ITSN2Q9NZM3 1697 aa8.64□□□□□ -1.03
CHD3-212ENST00000570758 C9orf84Q5VXU9 1444 aa8.63□□□□□ -1.03
CHD3-212ENST00000570758 HNRNPMP52272 730 aaKnown RBP eCLIP8.63□□□□□ -1.03
CHD3-212ENST00000570758 MLECQ14165 292 aa8.63□□□□□ -1.03
CHD3-212ENST00000570758 CFDP1Q9UEE9 299 aaPredicted RBP8.63□□□□□ -1.03
CHD3-212ENST00000570758 MYT1LQ9UL68 1186 aa8.63□□□□□ -1.03
CHD3-212ENST00000570758 TIAM1Q13009 1591 aa8.63□□□□□ -1.03
CHD3-212ENST00000570758 HECW2Q9P2P5 1572 aa8.63□□□□□ -1.03
CHD3-212ENST00000570758 MLH3Q9UHC1 1453 aa8.63□□□□□ -1.03
CHD3-212ENST00000570758 DIP2CQ9Y2E4 1556 aa8.62□□□□□ -1.03
CHD3-212ENST00000570758 SYCP2Q9BX26 1530 aa8.62□□□□□ -1.03
CHD3-212ENST00000570758 RIMS1Q86UR5 1692 aaKnown RBP8.62□□□□□ -1.03
CHD3-212ENST00000570758 ABCA6Q8N139 1617 aa8.62□□□□□ -1.03
CHD3-212ENST00000570758 ZNF644Q9H582 1327 aaPredicted RBP8.61□□□□□ -1.03
CHD3-212ENST00000570758 KIAA1107Q9UPP5 1409 aa8.61□□□□□ -1.03
CHD3-212ENST00000570758 NCOA2Q15596 1464 aa8.6□□□□□ -1.03
CHD3-212ENST00000570758 KIDINS220Q9ULH0 1771 aa8.6□□□□□ -1.03
CHD3-212ENST00000570758 SPAG9O60271 1321 aaKnown RBP8.59□□□□□ -1.03
CHD3-212ENST00000570758 PLEKHH2Q8IVE3 1493 aa8.59□□□□□ -1.03
CHD3-212ENST00000570758 PLPPR3Q6T4P5 718 aa8.59□□□□□ -1.03
CHD3-212ENST00000570758 REREQ9P2R6 1566 aa8.59□□□□□ -1.03
CHD3-212ENST00000570758 LRRC9Q6ZRR7 1453 aa8.58□□□□□ -1.04
CHD3-212ENST00000570758 SUPT6HQ7KZ85 1726 aaKnown RBP8.58□□□□□ -1.04
CHD3-212ENST00000570758 KANK4Q5T7N3 995 aaPredicted RBP8.58□□□□□ -1.04
CHD3-212ENST00000570758 FER1L4A9Z1Z3 1794 aa8.58□□□□□ -1.04
CHD3-212ENST00000570758 MBD5Q9P267 1494 aa8.57□□□□□ -1.04
CHD3-212ENST00000570758 AGLP35573 1532 aa8.57□□□□□ -1.04
CHD3-212ENST00000570758 MAP3K1Q13233 1512 aa8.57□□□□□ -1.04
CHD3-212ENST00000570758 ATP7AQ04656 1500 aa8.56□□□□□ -1.04
CHD3-212ENST00000570758 CEBPAP49715 358 aaPredicted RBP8.56□□□□□ -1.04
CHD3-212ENST00000570758 CAMSAP2Q08AD1 1489 aa8.56□□□□□ -1.04
CHD3-212ENST00000570758 INO80Q9ULG1 1556 aaPredicted RBP8.56□□□□□ -1.04
CHD3-212ENST00000570758 LMTK3Q96Q04 1460 aa8.55□□□□□ -1.04
CHD3-212ENST00000570758 A2MP01023 1474 aa8.54□□□□□ -1.04
CHD3-212ENST00000570758 PLXNC1O60486 1568 aa8.53□□□□□ -1.04
CHD3-212ENST00000570758 RTEL1-TNFRSF6BF6WH68 1400 aa8.53□□□□□ -1.04
CHD3-212ENST00000570758 CCDC141Q6ZP82 1450 aa8.52□□□□□ -1.05
CHD3-212ENST00000570758 HSPA2P54652 639 aa8.52□□□□□ -1.05
CHD3-212ENST00000570758 MYOM3Q5VTT5 1437 aa8.51□□□□□ -1.05
CHD3-212ENST00000570758 ARHGEF5Q12774 1597 aa8.51□□□□□ -1.05
CHD3-212ENST00000570758 C3P01024 1663 aa8.5□□□□□ -1.05
CHD3-212ENST00000570758 ADGBQ8N7X0 1667 aa8.5□□□□□ -1.05
CHD3-212ENST00000570758 APLP2Q06481 763 aa8.5□□□□□ -1.05
CHD3-212ENST00000570758 RSPH4AQ5TD94 716 aa8.5□□□□□ -1.05
CHD3-212ENST00000570758 MIA2Q96PC5 1412 aa8.5□□□□□ -1.05
CHD3-212ENST00000570758 CNTLNQ9NXG0 1405 aa8.5□□□□□ -1.05
CHD3-212ENST00000570758 DHX29Q7Z478 1369 aaKnown RBP8.49□□□□□ -1.05
CHD3-212ENST00000570758 GGT6Q6P531 493 aa8.49□□□□□ -1.05
CHD3-212ENST00000570758 ESF1Q9H501 851 aaKnown RBP8.49□□□□□ -1.05
CHD3-212ENST00000570758 PREX1Q8TCU6 1659 aa8.48□□□□□ -1.05
CHD3-212ENST00000570758 ZMYM3Q14202 1370 aa8.48□□□□□ -1.05
CHD3-212ENST00000570758 CLTCQ00610 1675 aaKnown RBP8.47□□□□□ -1.05
CHD3-212ENST00000570758 KIF3BO15066 747 aa8.47□□□□□ -1.05
CHD3-212ENST00000570758 TSPY4P0CV99 314 aa8.47□□□□□ -1.05
CHD3-212ENST00000570758 TSPY10P0CW01 314 aa8.47□□□□□ -1.05
CHD3-212ENST00000570758 MAST1Q9Y2H9 1570 aa8.47□□□□□ -1.05
CHD3-212ENST00000570758 MROH2AA6NES4 1674 aa8.46□□□□□ -1.05
CHD3-212ENST00000570758 UHRF1BP1Q6BDS2 1440 aa8.46□□□□□ -1.05
CHD3-212ENST00000570758 PTPN23Q9H3S7 1636 aa8.46□□□□□ -1.06
CHD3-212ENST00000570758 ABCC5O15440 1437 aa8.46□□□□□ -1.06
CHD3-212ENST00000570758 FGD6Q6ZV73 1430 aa8.46□□□□□ -1.06
CHD3-212ENST00000570758 TCOF1Q13428 1488 aaKnown RBP8.45□□□□□ -1.06
CHD3-212ENST00000570758 NPATQ14207 1427 aa8.45□□□□□ -1.06
CHD3-212ENST00000570758 PTPRKQ15262 1439 aa8.45□□□□□ -1.06
CHD3-212ENST00000570758 SETD1BQ9UPS6 1966 aaKnown RBP8.44□□□□□ -1.06
CHD3-212ENST00000570758 PPP6R1Q9UPN7 881 aa8.44□□□□□ -1.06
CHD3-212ENST00000570758 ILDR1Q86SU0 546 aaPredicted RBP8.43□□□□□ -1.06
CHD3-212ENST00000570758 DAPK1P53355 1430 aa8.43□□□□□ -1.06
CHD3-212ENST00000570758 FBXO31Q5XUX0 539 aaPredicted RBP8.42□□□□□ -1.06
CHD3-212ENST00000570758 SHANK2Q9UPX8 1470 aa8.42□□□□□ -1.06
CHD3-212ENST00000570758 KDM5DQ9BY66 1539 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms