RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 MAGI2Q86UL8 1455 aa24.26■■□□□ 1.47
NDE1-203ENST00000570727 SIGLEC1Q9BZZ2 1709 aa24.26■■□□□ 1.47
NDE1-203ENST00000570727 MYO5CQ9NQX4 1742 aa24.26■■□□□ 1.47
NDE1-203ENST00000570727 TROQ12816 1431 aaPredicted RBP24.26■■□□□ 1.47
NDE1-203ENST00000570727 ZFYVE16Q7Z3T8 1539 aa24.25■■□□□ 1.47
NDE1-203ENST00000570727 POGZQ7Z3K3 1410 aa24.25■■□□□ 1.47
NDE1-203ENST00000570727 RIMS1Q86UR5 1692 aaKnown RBP24.21■■□□□ 1.47
NDE1-203ENST00000570727 CLIP1P30622 1438 aa24.18■■□□□ 1.46
NDE1-203ENST00000570727 CASKIN1Q8WXD9 1431 aa24.18■■□□□ 1.46
NDE1-203ENST00000570727 ATP10AO60312 1499 aa24.15■■□□□ 1.46
NDE1-203ENST00000570727 MLECQ14165 292 aa24.15■■□□□ 1.46
NDE1-203ENST00000570727 AFAP1Q8N556 730 aa24.15■■□□□ 1.46
NDE1-203ENST00000570727 PCF11O94913 1555 aaKnown RBP24.15■■□□□ 1.46
NDE1-203ENST00000570727 ARHGAP5Q13017 1502 aa24.15■■□□□ 1.46
NDE1-203ENST00000570727 CDC42BPBQ9Y5S2 1711 aa24.14■■□□□ 1.45
NDE1-203ENST00000570727 LMTK3Q96Q04 1460 aa24.13■■□□□ 1.45
NDE1-203ENST00000570727 CCDC18Q5T9S5 1454 aa24.12■■□□□ 1.45
NDE1-203ENST00000570727 ZNF518AQ6AHZ1 1483 aa24.11■■□□□ 1.45
NDE1-203ENST00000570727 PLPPR3Q6T4P5 718 aa24.1■■□□□ 1.45
NDE1-203ENST00000570727 C9orf84Q5VXU9 1444 aa24.1■■□□□ 1.45
NDE1-203ENST00000570727 KDM5CP41229 1560 aa24.08■■□□□ 1.45
NDE1-203ENST00000570727 FER1L4A9Z1Z3 1794 aa24.07■■□□□ 1.44
NDE1-203ENST00000570727 FYCO1Q9BQS8 1478 aa24.06■■□□□ 1.44
NDE1-203ENST00000570727 ARHGEF12Q9NZN5 1544 aa24.05■■□□□ 1.44
NDE1-203ENST00000570727 PREX2Q70Z35 1606 aa24.05■■□□□ 1.44
NDE1-203ENST00000570727 HSPA2P54652 639 aa24.04■■□□□ 1.44
NDE1-203ENST00000570727 TRAPPC8Q9Y2L5 1435 aa24.02■■□□□ 1.44
NDE1-203ENST00000570727 MYT1LQ9UL68 1186 aa24.02■■□□□ 1.44
NDE1-203ENST00000570727 CDC42BPAQ5VT25 1732 aa24.01■■□□□ 1.43
NDE1-203ENST00000570727 MLH3Q9UHC1 1453 aa24.01■■□□□ 1.43
NDE1-203ENST00000570727 ABCC1P33527 1531 aa24■■□□□ 1.43
NDE1-203ENST00000570727 DIP2CQ9Y2E4 1556 aa24■■□□□ 1.43
NDE1-203ENST00000570727 CEBPAP49715 358 aaPredicted RBP23.98■■□□□ 1.43
NDE1-203ENST00000570727 ITSN2Q9NZM3 1697 aa23.98■■□□□ 1.43
NDE1-203ENST00000570727 ABCA6Q8N139 1617 aa23.97■■□□□ 1.43
NDE1-203ENST00000570727 REREQ9P2R6 1566 aa23.96■■□□□ 1.43
NDE1-203ENST00000570727 FBXO41Q8TF61 875 aa23.95■■□□□ 1.42
NDE1-203ENST00000570727 GPATCH8Q9UKJ3 1502 aaKnown RBP23.94■■□□□ 1.42
NDE1-203ENST00000570727 ZNF777Q9ULD5 760 aaPredicted RBP23.93■■□□□ 1.42
NDE1-203ENST00000570727 KIDINS220Q9ULH0 1771 aa23.93■■□□□ 1.42
NDE1-203ENST00000570727 SAMD9LQ8IVG5 1584 aa23.91■■□□□ 1.42
NDE1-203ENST00000570727 AGLP35573 1532 aa23.9■■□□□ 1.42
NDE1-203ENST00000570727 SETD1BQ9UPS6 1966 aaKnown RBP23.89■■□□□ 1.42
NDE1-203ENST00000570727 HNRNPMP52272 730 aaKnown RBP eCLIP23.89■■□□□ 1.41
NDE1-203ENST00000570727 PREX1Q8TCU6 1659 aa23.87■■□□□ 1.41
NDE1-203ENST00000570727 CFDP1Q9UEE9 299 aaPredicted RBP23.85■■□□□ 1.41
NDE1-203ENST00000570727 SYCP2Q9BX26 1530 aa23.84■■□□□ 1.41
NDE1-203ENST00000570727 SPAG9O60271 1321 aaKnown RBP23.84■■□□□ 1.41
NDE1-203ENST00000570727 MTUS2Q5JR59 1369 aa23.83■■□□□ 1.41
NDE1-203ENST00000570727 CCNB3Q8WWL7 1395 aa23.83■■□□□ 1.41
NDE1-203ENST00000570727 KIAA1107Q9UPP5 1409 aa23.83■■□□□ 1.4
NDE1-203ENST00000570727 C3P01024 1663 aa23.83■■□□□ 1.4
NDE1-203ENST00000570727 ESF1Q9H501 851 aaKnown RBP23.79■■□□□ 1.4
NDE1-203ENST00000570727 PLEKHH2Q8IVE3 1493 aa23.79■■□□□ 1.4
NDE1-203ENST00000570727 CEP162Q5TB80 1403 aa23.78■■□□□ 1.4
NDE1-203ENST00000570727 STRCQ7RTU9 1775 aa23.78■■□□□ 1.4
NDE1-203ENST00000570727 UHRF1BP1Q6BDS2 1440 aa23.77■■□□□ 1.4
NDE1-203ENST00000570727 ZNF644Q9H582 1327 aaPredicted RBP23.77■■□□□ 1.4
NDE1-203ENST00000570727 ATP7AQ04656 1500 aa23.74■■□□□ 1.39
NDE1-203ENST00000570727 SUPT6HQ7KZ85 1726 aaKnown RBP23.74■■□□□ 1.39
NDE1-203ENST00000570727 CERKQ8TCT0 537 aa23.74■■□□□ 1.39
NDE1-203ENST00000570727 CNTLNQ9NXG0 1405 aa23.74■■□□□ 1.39
NDE1-203ENST00000570727 TIAM1Q13009 1591 aa23.74■■□□□ 1.39
NDE1-203ENST00000570727 INO80Q9ULG1 1556 aaPredicted RBP23.73■■□□□ 1.39
NDE1-203ENST00000570727 EHBP1L1Q8N3D4 1523 aa23.72■■□□□ 1.39
NDE1-203ENST00000570727 A2MP01023 1474 aa23.7■■□□□ 1.38
NDE1-203ENST00000570727 MBD5Q9P267 1494 aa23.7■■□□□ 1.38
NDE1-203ENST00000570727 DMRT2Q9Y5R5 561 aa23.7■■□□□ 1.38
NDE1-203ENST00000570727 ZMYM3Q14202 1370 aa23.69■■□□□ 1.38
NDE1-203ENST00000570727 PLXNC1O60486 1568 aa23.69■■□□□ 1.38
NDE1-203ENST00000570727 MROH2AA6NES4 1674 aa23.68■■□□□ 1.38
NDE1-203ENST00000570727 LOC105371045A0A1W2PR82 267 aa23.66■■□□□ 1.38
NDE1-203ENST00000570727 GGT6Q6P531 493 aa23.64■■□□□ 1.37
NDE1-203ENST00000570727 NPATQ14207 1427 aa23.64■■□□□ 1.37
NDE1-203ENST00000570727 CLTCQ00610 1675 aaKnown RBP23.63■■□□□ 1.37
NDE1-203ENST00000570727 ADGBQ8N7X0 1667 aa23.63■■□□□ 1.37
NDE1-203ENST00000570727 RTEL1-TNFRSF6BF6WH68 1400 aa23.62■■□□□ 1.37
NDE1-203ENST00000570727 NCOA2Q15596 1464 aa23.62■■□□□ 1.37
NDE1-203ENST00000570727 PTPRTO14522 1441 aa23.61■■□□□ 1.37
NDE1-203ENST00000570727 PPP6R1Q9UPN7 881 aa23.59■■□□□ 1.37
NDE1-203ENST00000570727 NCOA1Q15788 1441 aa23.58■■□□□ 1.36
NDE1-203ENST00000570727 DHX29Q7Z478 1369 aaKnown RBP23.57■■□□□ 1.36
NDE1-203ENST00000570727 PTPRKQ15262 1439 aa23.56■■□□□ 1.36
NDE1-203ENST00000570727 RSPH4AQ5TD94 716 aa23.55■■□□□ 1.36
NDE1-203ENST00000570727 CAMSAP2Q08AD1 1489 aa23.55■■□□□ 1.36
NDE1-203ENST00000570727 CAMSAP1Q5T5Y3 1602 aa23.54■■□□□ 1.36
NDE1-203ENST00000570727 VPS8Q8N3P4 1428 aa23.53■■□□□ 1.36
NDE1-203ENST00000570727 CCDC141Q6ZP82 1450 aa23.53■■□□□ 1.36
NDE1-203ENST00000570727 LRRC9Q6ZRR7 1453 aa23.51■■□□□ 1.35
NDE1-203ENST00000570727 KIF3BO15066 747 aa23.5■■□□□ 1.35
NDE1-203ENST00000570727 NCKAP5LQ9HCH0 1330 aa23.5■■□□□ 1.35
NDE1-203ENST00000570727 LTBP4Q8N2S1 1624 aa23.48■■□□□ 1.35
NDE1-203ENST00000570727 MYO3AQ8NEV4 1616 aa23.48■■□□□ 1.35
NDE1-203ENST00000570727 KANK4Q5T7N3 995 aaPredicted RBP23.48■■□□□ 1.35
NDE1-203ENST00000570727 ZNF142P52746 1687 aaPredicted RBP23.48■■□□□ 1.35
NDE1-203ENST00000570727 ARHGEF5Q12774 1597 aa23.47■■□□□ 1.35
NDE1-203ENST00000570727 CEP170BQ9Y4F5 1589 aaPredicted RBP23.45■■□□□ 1.34
NDE1-203ENST00000570727 TSPY4P0CV99 314 aa23.45■■□□□ 1.34
NDE1-203ENST00000570727 TSPY10P0CW01 314 aa23.45■■□□□ 1.34
NDE1-203ENST00000570727 FBXO31Q5XUX0 539 aaPredicted RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms