RNA–Protein interactions for RNA: ENST00000570623.1

TOM1L1-206, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-206ENST00000570623 SPNS2Q8IVW8 549 aa11.17□□□□□ -0.62
TOM1L1-206ENST00000570623 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.16□□□□□ -0.62
TOM1L1-206ENST00000570623 KCNV2Q8TDN2 545 aa11.15□□□□□ -0.62
TOM1L1-206ENST00000570623 TMEM121BQ9BXQ6 578 aaPredicted RBP11.15□□□□□ -0.62
TOM1L1-206ENST00000570623 PDCD7Q8N8D1 485 aaKnown RBP11.14□□□□□ -0.63
TOM1L1-206ENST00000570623 SNPHO15079 494 aa11.12□□□□□ -0.63
TOM1L1-206ENST00000570623 NLRP6P59044 892 aa11.12□□□□□ -0.63
TOM1L1-206ENST00000570623 SOX12O15370 315 aa11.11□□□□□ -0.63
TOM1L1-206ENST00000570623 FBXO22Q8NEZ5 403 aa11.11□□□□□ -0.63
TOM1L1-206ENST00000570623 EFCAB3Q8N7B9 438 aa11.1□□□□□ -0.63
TOM1L1-206ENST00000570623 CABP2Q9NPB3 220 aa11.1□□□□□ -0.63
TOM1L1-206ENST00000570623 PPP1R37O75864 691 aa11.07□□□□□ -0.64
TOM1L1-206ENST00000570623 PHF8Q9UPP1 1060 aa11.06□□□□□ -0.64
TOM1L1-206ENST00000570623 POTEB3A0JP26 581 aa11.05□□□□□ -0.64
TOM1L1-206ENST00000570623 POTEBQ6S5H4 581 aa11.05□□□□□ -0.64
TOM1L1-206ENST00000570623 C3orf67Q6ZVT6 689 aa11.04□□□□□ -0.64
TOM1L1-206ENST00000570623 ARHGEF1Q92888 912 aaKnown RBP11.04□□□□□ -0.64
TOM1L1-206ENST00000570623 EMP3P54852 163 aa11.03□□□□□ -0.64
TOM1L1-206ENST00000570623 LMOD2Q6P5Q4 547 aa11.03□□□□□ -0.64
TOM1L1-206ENST00000570623 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.03□□□□□ -0.64
TOM1L1-206ENST00000570623 MKRN3Q13064 507 aaKnown RBP11.02□□□□□ -0.65
TOM1L1-206ENST00000570623 TULP1O00294 542 aaPredicted RBP11.01□□□□□ -0.65
TOM1L1-206ENST00000570623 GOLGA2Q08379 1002 aa11.01□□□□□ -0.65
TOM1L1-206ENST00000570623 E2F4Q16254 413 aa11.01□□□□□ -0.65
TOM1L1-206ENST00000570623 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.01□□□□□ -0.651e-9■□□□□ 8.7
TOM1L1-206ENST00000570623 L3MBTL3Q96JM7 780 aaPredicted RBP11□□□□□ -0.65
TOM1L1-206ENST00000570623 KRTAP3-3Q9BYR6 98 aa10.99□□□□□ -0.65
TOM1L1-206ENST00000570623 KRTAP3-2Q9BYR7 98 aa10.99□□□□□ -0.65
TOM1L1-206ENST00000570623 DPY19L2Q6NUT2 758 aa10.98□□□□□ -0.65
TOM1L1-206ENST00000570623 HS3ST6Q96QI5 342 aa10.98□□□□□ -0.65
TOM1L1-206ENST00000570623 FAM205CA6NFA0 338 aa10.97□□□□□ -0.65
TOM1L1-206ENST00000570623 MS4A4AQ96JQ5 239 aa10.95□□□□□ -0.66
TOM1L1-206ENST00000570623 NCKAP5LQ9HCH0 1330 aa10.94□□□□□ -0.66
TOM1L1-206ENST00000570623 PDE4AP27815 886 aa10.93□□□□□ -0.66
TOM1L1-206ENST00000570623 MFSD10Q14728 455 aa10.92□□□□□ -0.66
TOM1L1-206ENST00000570623 ILDR1Q86SU0 546 aaPredicted RBP10.92□□□□□ -0.66
TOM1L1-206ENST00000570623 TESPA1A2RU30 521 aaPredicted RBP10.91□□□□□ -0.66
TOM1L1-206ENST00000570623 TMEM132AQ24JP5 1023 aa10.91□□□□□ -0.66
TOM1L1-206ENST00000570623 LARP6Q9BRS8 491 aaKnown RBP10.91□□□□□ -0.66
TOM1L1-206ENST00000570623 CRISPLD2Q9H0B8 497 aa10.9□□□□□ -0.66
TOM1L1-206ENST00000570623 SEMA3EO15041 775 aa10.88□□□□□ -0.67
TOM1L1-206ENST00000570623 HOXB3P14651 431 aaPredicted RBP10.88□□□□□ -0.67
TOM1L1-206ENST00000570623 DDX27Q96GQ7 796 aaKnown RBP10.87□□□□□ -0.67
TOM1L1-206ENST00000570623 ARIH1Q9Y4X5 557 aaPredicted RBP10.87□□□□□ -0.67
TOM1L1-206ENST00000570623 ZC3H15Q8WU90 426 aaKnown RBP10.86□□□□□ -0.67
TOM1L1-206ENST00000570623 GTF3C3Q9Y5Q9 886 aa10.86□□□□□ -0.67
TOM1L1-206ENST00000570623 BOLA1Q9Y3E2 137 aa10.84□□□□□ -0.67
TOM1L1-206ENST00000570623 CAMK2BQ13554 666 aa10.83□□□□□ -0.68
TOM1L1-206ENST00000570623 SMYD5Q6GMV2 418 aa10.83□□□□□ -0.68
TOM1L1-206ENST00000570623 ERICH6Q7L0X2 663 aa10.79□□□□□ -0.68
TOM1L1-206ENST00000570623 G3V3G9 751 aa10.78□□□□□ -0.68
TOM1L1-206ENST00000570623 HOXB1P14653 301 aaPredicted RBP10.78□□□□□ -0.68
TOM1L1-206ENST00000570623 TIMELESSQ9UNS1 1208 aa10.78□□□□□ -0.68
TOM1L1-206ENST00000570623 BRPF1P55201 1214 aaPredicted RBP10.77□□□□□ -0.69
TOM1L1-206ENST00000570623 ZNF710Q8N1W2 664 aa10.75□□□□□ -0.69
TOM1L1-206ENST00000570623 ERBB3P21860 1342 aa10.75□□□□□ -0.69
TOM1L1-206ENST00000570623 PPP1R15BQ5SWA1 713 aa10.74□□□□□ -0.69
TOM1L1-206ENST00000570623 GPHNQ9NQX3 736 aaPredicted RBP10.74□□□□□ -0.69
TOM1L1-206ENST00000570623 ZMYND10O75800 440 aa10.73□□□□□ -0.69
TOM1L1-206ENST00000570623 SLC24A3Q9HC58 644 aa10.73□□□□□ -0.69
TOM1L1-206ENST00000570623 DOK7Q18PE1 504 aa10.72□□□□□ -0.69
TOM1L1-206ENST00000570623 TMEM92Q6UXU6 159 aa10.7□□□□□ -0.7
TOM1L1-206ENST00000570623 NEUROD2Q15784 382 aa10.69□□□□□ -0.7
TOM1L1-206ENST00000570623 VARS2Q5ST30 1063 aaKnown RBP10.69□□□□□ -0.7
TOM1L1-206ENST00000570623 BARGINQ6ZT62 677 aa10.67□□□□□ -0.7
TOM1L1-206ENST00000570623 MICALL2Q8IY33 904 aa10.66□□□□□ -0.7
TOM1L1-206ENST00000570623 RNF166Q96A37 237 aaPredicted RBP10.66□□□□□ -0.7
TOM1L1-206ENST00000570623 SPDYE16A6NNV3 312 aaPredicted RBP10.65□□□□□ -0.7
TOM1L1-206ENST00000570623 MLLT3P42568 568 aaPredicted RBP10.65□□□□□ -0.7
TOM1L1-206ENST00000570623 DSG2Q14126 1118 aa10.64□□□□□ -0.71
TOM1L1-206ENST00000570623 PDIA6Q15084 440 aa10.64□□□□□ -0.71
TOM1L1-206ENST00000570623 GPIHBP1Q8IV16 184 aa10.64□□□□□ -0.71
TOM1L1-206ENST00000570623 DPYSL4O14531 572 aa10.63□□□□□ -0.71
TOM1L1-206ENST00000570623 TMC2Q8TDI7 906 aa10.63□□□□□ -0.71
TOM1L1-206ENST00000570623 EMILIN3Q9NT22 766 aa10.63□□□□□ -0.71
TOM1L1-206ENST00000570623 RIMBP2O15034 1052 aa10.62□□□□□ -0.71
TOM1L1-206ENST00000570623 FOXK1P85037 733 aa10.62□□□□□ -0.71
TOM1L1-206ENST00000570623 RBM26Q5T8P6 1007 aaKnown RBP10.62□□□□□ -0.71
TOM1L1-206ENST00000570623 MYT1LQ9UL68 1186 aa10.61□□□□□ -0.71
TOM1L1-206ENST00000570623 GPR153Q6NV75 609 aa10.6□□□□□ -0.71
TOM1L1-206ENST00000570623 AK7Q96M32 723 aa10.59□□□□□ -0.71
TOM1L1-206ENST00000570623 ZNF687Q8N1G0 1237 aa10.58□□□□□ -0.72
TOM1L1-206ENST00000570623 C14orf37Q86TY3 774 aa10.57□□□□□ -0.72
TOM1L1-206ENST00000570623 ZSWIM6Q9HCJ5 1215 aa10.56□□□□□ -0.72
TOM1L1-206ENST00000570623 PLPP6Q8IY26 295 aa10.55□□□□□ -0.72
TOM1L1-206ENST00000570623 KIF3CO14782 793 aa10.54□□□□□ -0.72
TOM1L1-206ENST00000570623 ARSIQ5FYB1 569 aa10.54□□□□□ -0.72
TOM1L1-206ENST00000570623 KRI1Q8N9T8 703 aaKnown RBP10.54□□□□□ -0.72
TOM1L1-206ENST00000570623 C2orf72A6NCS6 295 aa10.53□□□□□ -0.72
TOM1L1-206ENST00000570623 KHSRPQ92945 711 aaKnown RBP eCLIP10.53□□□□□ -0.72
TOM1L1-206ENST00000570623 DAXXQ9UER7 740 aaPredicted RBP10.53□□□□□ -0.72
TOM1L1-206ENST00000570623 ANKRD13DQ6ZTN6 518 aa10.49□□□□□ -0.73
TOM1L1-206ENST00000570623 GPR37O15354 613 aa10.48□□□□□ -0.73
TOM1L1-206ENST00000570623 MAP3K9P80192 1104 aa10.48□□□□□ -0.73
TOM1L1-206ENST00000570623 TRIM66O15016 1216 aa10.47□□□□□ -0.73
TOM1L1-206ENST00000570623 GPBP1L1Q9HC44 474 aaPredicted RBP10.47□□□□□ -0.73
TOM1L1-206ENST00000570623 ZNF316A6NFI3 1004 aaPredicted RBP10.45□□□□□ -0.74
TOM1L1-206ENST00000570623 KDM4CQ9H3R0 1056 aa10.45□□□□□ -0.74
TOM1L1-206ENST00000570623 GRXCR2A6NFK2 248 aa10.44□□□□□ -0.74
TOM1L1-206ENST00000570623 PDE4DQ08499 809 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms