RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 ARAP3Q8WWN8 1544 aa16.52■□□□□ 0.24
NPLOC4-203ENST00000570300 AKNAQ7Z591 1439 aa16.52■□□□□ 0.23
NPLOC4-203ENST00000570300 CFDP1Q9UEE9 299 aaPredicted RBP16.51■□□□□ 0.23
NPLOC4-203ENST00000570300 DNMT1P26358 1616 aaKnown RBP16.49■□□□□ 0.23
NPLOC4-203ENST00000570300 TTC37Q6PGP7 1564 aa16.49■□□□□ 0.23
NPLOC4-203ENST00000570300 CAMSAP2Q08AD1 1489 aa16.48■□□□□ 0.23
NPLOC4-203ENST00000570300 PTPRKQ15262 1439 aa16.48■□□□□ 0.23
NPLOC4-203ENST00000570300 ASXL2Q76L83 1435 aa16.48■□□□□ 0.23
NPLOC4-203ENST00000570300 NPM1P06748 294 aaKnown RBP eCLIP16.48■□□□□ 0.23
NPLOC4-203ENST00000570300 MYO5CQ9NQX4 1742 aa16.48■□□□□ 0.23
NPLOC4-203ENST00000570300 CDC42BPBQ9Y5S2 1711 aa16.48■□□□□ 0.23
NPLOC4-203ENST00000570300 HFM1A2PYH4 1435 aa16.47■□□□□ 0.23
NPLOC4-203ENST00000570300 ABCA9Q8IUA7 1624 aa16.47■□□□□ 0.23
NPLOC4-203ENST00000570300 PLCH2O75038 1416 aa16.46■□□□□ 0.23
NPLOC4-203ENST00000570300 SETD5Q9C0A6 1442 aa16.46■□□□□ 0.23
NPLOC4-203ENST00000570300 MAPKBP1O60336 1514 aa16.46■□□□□ 0.23
NPLOC4-203ENST00000570300 ROCK1Q13464 1354 aa16.46■□□□□ 0.23
NPLOC4-203ENST00000570300 DAPK1P53355 1430 aa16.45■□□□□ 0.22
NPLOC4-203ENST00000570300 ARHGEF5Q12774 1597 aa16.45■□□□□ 0.22
NPLOC4-203ENST00000570300 ABCC5O15440 1437 aa16.45■□□□□ 0.22
NPLOC4-203ENST00000570300 KIAA1107Q9UPP5 1409 aa16.45■□□□□ 0.22
NPLOC4-203ENST00000570300 PLEKHH2Q8IVE3 1493 aa16.44■□□□□ 0.22
NPLOC4-203ENST00000570300 ZEB1P37275 1124 aaPredicted RBP16.43■□□□□ 0.22
NPLOC4-203ENST00000570300 RSPH4AQ5TD94 716 aa16.43■□□□□ 0.22
NPLOC4-203ENST00000570300 ZNF644Q9H582 1327 aaPredicted RBP16.43■□□□□ 0.22
NPLOC4-203ENST00000570300 SHANK2Q9UPX8 1470 aa16.42■□□□□ 0.22
NPLOC4-203ENST00000570300 ITGAEP38570 1179 aa16.42■□□□□ 0.22
NPLOC4-203ENST00000570300 ACIN1Q9UKV3 1341 aaKnown RBP16.42■□□□□ 0.22
NPLOC4-203ENST00000570300 MBD5Q9P267 1494 aa16.42■□□□□ 0.22
NPLOC4-203ENST00000570300 KCNH8Q96L42 1107 aa16.41■□□□□ 0.22
NPLOC4-203ENST00000570300 NAIPQ13075 1403 aa16.41■□□□□ 0.22
NPLOC4-203ENST00000570300 SAMD9LQ8IVG5 1584 aa16.41■□□□□ 0.22
NPLOC4-203ENST00000570300 ADGRL2O95490 1459 aa16.41■□□□□ 0.22
NPLOC4-203ENST00000570300 CROCC2H7BZ55 1655 aa16.4■□□□□ 0.22
NPLOC4-203ENST00000570300 RAB3GAP2Q9H2M9 1393 aa16.4■□□□□ 0.22
NPLOC4-203ENST00000570300 CYB5RLQ6IPT4 315 aa16.4■□□□□ 0.22
NPLOC4-203ENST00000570300 CLSPNQ9HAW4 1339 aa16.4■□□□□ 0.22
NPLOC4-203ENST00000570300 ARHGAP5Q13017 1502 aa16.4■□□□□ 0.22
NPLOC4-203ENST00000570300 EFCAB2Q5VUJ9 269 aa16.39■□□□□ 0.21
NPLOC4-203ENST00000570300 GCC2Q8IWJ2 1684 aa16.39■□□□□ 0.21
NPLOC4-203ENST00000570300 CCER1Q8TC90 406 aaPredicted RBP16.37■□□□□ 0.21
NPLOC4-203ENST00000570300 ADGBQ8N7X0 1667 aa16.36■□□□□ 0.21
NPLOC4-203ENST00000570300 CCDC141Q6ZP82 1450 aa16.35■□□□□ 0.21
NPLOC4-203ENST00000570300 GLI2P10070 1586 aa16.35■□□□□ 0.21
NPLOC4-203ENST00000570300 NCOA1Q15788 1441 aa16.35■□□□□ 0.21
NPLOC4-203ENST00000570300 MAST1Q9Y2H9 1570 aa16.34■□□□□ 0.21
NPLOC4-203ENST00000570300 ZNF777Q9ULD5 760 aaPredicted RBP16.34■□□□□ 0.21
NPLOC4-203ENST00000570300 DHX57Q6P158 1386 aaKnown RBP16.34■□□□□ 0.21
NPLOC4-203ENST00000570300 ABCC1P33527 1531 aa16.34■□□□□ 0.21
NPLOC4-203ENST00000570300 SYCP2Q9BX26 1530 aa16.31■□□□□ 0.2
NPLOC4-203ENST00000570300 C9orf84Q5VXU9 1444 aa16.31■□□□□ 0.2
NPLOC4-203ENST00000570300 ANKRD30AQ9BXX3 1397 aa16.31■□□□□ 0.2
NPLOC4-203ENST00000570300 CFAP74Q9C0B2 1584 aa16.3■□□□□ 0.2
NPLOC4-203ENST00000570300 FANCAO15360 1455 aa16.3■□□□□ 0.2
NPLOC4-203ENST00000570300 TSPY4P0CV99 314 aa16.3■□□□□ 0.2
NPLOC4-203ENST00000570300 TSPY10P0CW01 314 aa16.3■□□□□ 0.2
NPLOC4-203ENST00000570300 ARHGEF12Q9NZN5 1544 aa16.29■□□□□ 0.2
NPLOC4-203ENST00000570300 CD109Q6YHK3 1445 aa16.29■□□□□ 0.2
NPLOC4-203ENST00000570300 HNRNPMP52272 730 aaKnown RBP eCLIP16.28■□□□□ 0.22e-6■■■■□ 22.6
NPLOC4-203ENST00000570300 CHIC2Q9UKJ5 165 aa16.28■□□□□ 0.2
NPLOC4-203ENST00000570300 MAP3K4Q9Y6R4 1608 aa16.27■□□□□ 0.2
NPLOC4-203ENST00000570300 RTEL1-TNFRSF6BF6WH68 1400 aa16.27■□□□□ 0.19
NPLOC4-203ENST00000570300 PLXNC1O60486 1568 aa16.26■□□□□ 0.19
NPLOC4-203ENST00000570300 RRP7BPQ9NSQ0 103 aa16.26■□□□□ 0.19
NPLOC4-203ENST00000570300 NEO1Q92859 1461 aa16.26■□□□□ 0.19
NPLOC4-203ENST00000570300 DIP2BQ9P265 1576 aa16.25■□□□□ 0.19
NPLOC4-203ENST00000570300 ADGRL1O94910 1474 aa16.22■□□□□ 0.19
NPLOC4-203ENST00000570300 TRAPPC8Q9Y2L5 1435 aa16.22■□□□□ 0.19
NPLOC4-203ENST00000570300 KDM6BO15054 1643 aa16.22■□□□□ 0.19
NPLOC4-203ENST00000570300 ANKRD50Q9ULJ7 1429 aa16.21■□□□□ 0.19
NPLOC4-203ENST00000570300 KIF15Q9NS87 1388 aa16.21■□□□□ 0.19
NPLOC4-203ENST00000570300 SCAPERQ9BY12 1400 aa16.19■□□□□ 0.18
NPLOC4-203ENST00000570300 ZNF518AQ6AHZ1 1483 aa16.18■□□□□ 0.18
NPLOC4-203ENST00000570300 ZFYVE16Q7Z3T8 1539 aa16.18■□□□□ 0.18
NPLOC4-203ENST00000570300 DUOX2Q9NRD8 1548 aa16.18■□□□□ 0.18
NPLOC4-203ENST00000570300 INO80Q9ULG1 1556 aaPredicted RBP16.17■□□□□ 0.18
NPLOC4-203ENST00000570300 KDM5CP41229 1560 aa16.17■□□□□ 0.18
NPLOC4-203ENST00000570300 KDM5DQ9BY66 1539 aa16.16■□□□□ 0.18
NPLOC4-203ENST00000570300 POGZQ7Z3K3 1410 aa16.16■□□□□ 0.18
NPLOC4-203ENST00000570300 ERBINQ96RT1 1412 aa16.16■□□□□ 0.18
NPLOC4-203ENST00000570300 SPAG9O60271 1321 aaKnown RBP16.16■□□□□ 0.18
NPLOC4-203ENST00000570300 FAM69CQ0P6D2 419 aa16.14■□□□□ 0.17
NPLOC4-203ENST00000570300 TEX14Q8IWB6 1497 aa16.14■□□□□ 0.17
NPLOC4-203ENST00000570300 MLH3Q9UHC1 1453 aa16.14■□□□□ 0.17
NPLOC4-203ENST00000570300 ATP7AQ04656 1500 aa16.14■□□□□ 0.17
NPLOC4-203ENST00000570300 AFAP1Q8N556 730 aa16.13■□□□□ 0.17
NPLOC4-203ENST00000570300 KIF13AQ9H1H9 1805 aa16.12■□□□□ 0.17
NPLOC4-203ENST00000570300 PPRC1Q5VV67 1664 aaKnown RBP16.12■□□□□ 0.17
NPLOC4-203ENST00000570300 DENND4BO75064 1496 aaPredicted RBP16.12■□□□□ 0.17
NPLOC4-203ENST00000570300 TIMELESSQ9UNS1 1208 aa16.12■□□□□ 0.17
NPLOC4-203ENST00000570300 PZPP20742 1482 aa16.11■□□□□ 0.17
NPLOC4-203ENST00000570300 TRHP20396 242 aaPredicted RBP16.11■□□□□ 0.17
NPLOC4-203ENST00000570300 MPHOSPH9Q99550 1183 aa16.11■□□□□ 0.17
NPLOC4-203ENST00000570300 UNC13BO14795 1591 aa16.11■□□□□ 0.17
NPLOC4-203ENST00000570300 MAGI2Q86UL8 1455 aa16.1■□□□□ 0.17
NPLOC4-203ENST00000570300 KIDINS220Q9ULH0 1771 aa16.09■□□□□ 0.17
NPLOC4-203ENST00000570300 TRIM52Q96A61 297 aa16.08■□□□□ 0.16
NPLOC4-203ENST00000570300 EIF2AK4Q9P2K8 1649 aaKnown RBP16.08■□□□□ 0.16
NPLOC4-203ENST00000570300 RICTORQ6R327 1708 aa16.08■□□□□ 0.16
NPLOC4-203ENST00000570300 HECW2Q9P2P5 1572 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms