RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 PPARGC1BQ86YN6 1023 aaKnown RBP15.55■□□□□ 0.08
GTF3C1-212ENST00000570129 FRMPD1Q5SYB0 1578 aa15.54■□□□□ 0.08
GTF3C1-212ENST00000570129 HNRNPMP52272 730 aaKnown RBP eCLIP15.54■□□□□ 0.08
GTF3C1-212ENST00000570129 ARHGAP5Q13017 1502 aa15.53■□□□□ 0.08
GTF3C1-212ENST00000570129 DENND4BO75064 1496 aaPredicted RBP15.52■□□□□ 0.08
GTF3C1-212ENST00000570129 ADGRL1O94910 1474 aa15.52■□□□□ 0.07
GTF3C1-212ENST00000570129 YEATS2Q9ULM3 1422 aa15.51■□□□□ 0.07
GTF3C1-212ENST00000570129 TRAPPC8Q9Y2L5 1435 aa15.51■□□□□ 0.07
GTF3C1-212ENST00000570129 PHLDB1Q86UU1 1377 aa15.51■□□□□ 0.07
GTF3C1-212ENST00000570129 TIAM1Q13009 1591 aa15.5■□□□□ 0.07
GTF3C1-212ENST00000570129 CFDP1Q9UEE9 299 aaPredicted RBP15.5■□□□□ 0.07
GTF3C1-212ENST00000570129 CDC42BPBQ9Y5S2 1711 aa15.5■□□□□ 0.07
GTF3C1-212ENST00000570129 CCNB3Q8WWL7 1395 aa15.49■□□□□ 0.07
GTF3C1-212ENST00000570129 LRRC9Q6ZRR7 1453 aa15.48■□□□□ 0.07
GTF3C1-212ENST00000570129 NCOA2Q15596 1464 aa15.47■□□□□ 0.07
GTF3C1-212ENST00000570129 MYO5CQ9NQX4 1742 aa15.47■□□□□ 0.07
GTF3C1-212ENST00000570129 CDC42BPAQ5VT25 1732 aa15.46■□□□□ 0.07
GTF3C1-212ENST00000570129 POGZQ7Z3K3 1410 aa15.46■□□□□ 0.07
GTF3C1-212ENST00000570129 RICTORQ6R327 1708 aa15.45■□□□□ 0.06
GTF3C1-212ENST00000570129 EHBP1L1Q8N3D4 1523 aa15.44■□□□□ 0.06
GTF3C1-212ENST00000570129 PREX2Q70Z35 1606 aa15.44■□□□□ 0.06
GTF3C1-212ENST00000570129 SAMD9LQ8IVG5 1584 aa15.44■□□□□ 0.06
GTF3C1-212ENST00000570129 MYT1LQ9UL68 1186 aa15.43■□□□□ 0.06
GTF3C1-212ENST00000570129 ARID4BQ4LE39 1312 aaPredicted RBP15.43■□□□□ 0.06
GTF3C1-212ENST00000570129 MLECQ14165 292 aa15.42■□□□□ 0.06
GTF3C1-212ENST00000570129 SIGLEC1Q9BZZ2 1709 aa15.41■□□□□ 0.06
GTF3C1-212ENST00000570129 APLP2Q06481 763 aa15.41■□□□□ 0.06
GTF3C1-212ENST00000570129 ABCC1P33527 1531 aa15.4■□□□□ 0.06
GTF3C1-212ENST00000570129 CFAP74Q9C0B2 1584 aa15.4■□□□□ 0.06
GTF3C1-212ENST00000570129 SYCP2Q9BX26 1530 aa15.39■□□□□ 0.05
GTF3C1-212ENST00000570129 MAP3K1Q13233 1512 aa15.38■□□□□ 0.05
GTF3C1-212ENST00000570129 MBD5Q9P267 1494 aa15.38■□□□□ 0.05
GTF3C1-212ENST00000570129 ZMYM4Q5VZL5 1548 aa15.37■□□□□ 0.05
GTF3C1-212ENST00000570129 ZFYVE16Q7Z3T8 1539 aa15.37■□□□□ 0.05
GTF3C1-212ENST00000570129 PLPPR3Q6T4P5 718 aa15.36■□□□□ 0.05
GTF3C1-212ENST00000570129 SPAG9O60271 1321 aaKnown RBP15.36■□□□□ 0.05
GTF3C1-212ENST00000570129 ZNF518AQ6AHZ1 1483 aa15.35■□□□□ 0.05
GTF3C1-212ENST00000570129 SUPT6HQ7KZ85 1726 aaKnown RBP15.34■□□□□ 0.05
GTF3C1-212ENST00000570129 ITSN2Q9NZM3 1697 aa15.34■□□□□ 0.05
GTF3C1-212ENST00000570129 KIAA1107Q9UPP5 1409 aa15.34■□□□□ 0.05
GTF3C1-212ENST00000570129 ATP10AO60312 1499 aa15.33■□□□□ 0.05
GTF3C1-212ENST00000570129 ARHGEF40Q8TER5 1519 aa15.33■□□□□ 0.05
GTF3C1-212ENST00000570129 KDM5CP41229 1560 aa15.33■□□□□ 0.05
GTF3C1-212ENST00000570129 CAMSAP2Q08AD1 1489 aa15.33■□□□□ 0.04
GTF3C1-212ENST00000570129 MLH3Q9UHC1 1453 aa15.32■□□□□ 0.04
GTF3C1-212ENST00000570129 MYOM3Q5VTT5 1437 aa15.31■□□□□ 0.04
GTF3C1-212ENST00000570129 MAGI2Q86UL8 1455 aa15.31■□□□□ 0.04
GTF3C1-212ENST00000570129 DIP2CQ9Y2E4 1556 aa15.3■□□□□ 0.04
GTF3C1-212ENST00000570129 KIDINS220Q9ULH0 1771 aa15.29■□□□□ 0.04
GTF3C1-212ENST00000570129 ABCA6Q8N139 1617 aa15.29■□□□□ 0.04
GTF3C1-212ENST00000570129 CEBPAP49715 358 aaPredicted RBP15.29■□□□□ 0.04
GTF3C1-212ENST00000570129 PLEKHH2Q8IVE3 1493 aa15.27■□□□□ 0.04
GTF3C1-212ENST00000570129 C9orf84Q5VXU9 1444 aa15.27■□□□□ 0.04
GTF3C1-212ENST00000570129 HECW2Q9P2P5 1572 aa15.27■□□□□ 0.03
GTF3C1-212ENST00000570129 CHIC2Q9UKJ5 165 aa15.26■□□□□ 0.03
GTF3C1-212ENST00000570129 FAM50AQ14320 339 aaKnown RBP15.25■□□□□ 0.03
GTF3C1-212ENST00000570129 ADAMTSL3P82987 1691 aa15.25■□□□□ 0.03
GTF3C1-212ENST00000570129 FGD6Q6ZV73 1430 aa15.25■□□□□ 0.03
GTF3C1-212ENST00000570129 BCORL1Q5H9F3 1711 aa15.24■□□□□ 0.03
GTF3C1-212ENST00000570129 ABCC5O15440 1437 aa15.24■□□□□ 0.03
GTF3C1-212ENST00000570129 ATP7AQ04656 1500 aa15.23■□□□□ 0.03
GTF3C1-212ENST00000570129 MADDQ8WXG6 1647 aa15.23■□□□□ 0.03
GTF3C1-212ENST00000570129 MIA2Q96PC5 1412 aa15.23■□□□□ 0.03
GTF3C1-212ENST00000570129 PTPRMP28827 1452 aa15.22■□□□□ 0.03
GTF3C1-212ENST00000570129 CCDC141Q6ZP82 1450 aa15.22■□□□□ 0.03
GTF3C1-212ENST00000570129 GGT6Q6P531 493 aa15.22■□□□□ 0.03
GTF3C1-212ENST00000570129 INO80Q9ULG1 1556 aaPredicted RBP15.21■□□□□ 0.03
GTF3C1-212ENST00000570129 TSPY4P0CV99 314 aa15.21■□□□□ 0.03
GTF3C1-212ENST00000570129 TSPY10P0CW01 314 aa15.21■□□□□ 0.03
GTF3C1-212ENST00000570129 RRP7BPQ9NSQ0 103 aa15.21■□□□□ 0.03
GTF3C1-212ENST00000570129 PTPN23Q9H3S7 1636 aa15.2■□□□□ 0.02
GTF3C1-212ENST00000570129 A2MP01023 1474 aa15.2■□□□□ 0.02
GTF3C1-212ENST00000570129 PTPRKQ15262 1439 aa15.19■□□□□ 0.02
GTF3C1-212ENST00000570129 ITGAEP38570 1179 aa15.19■□□□□ 0.02
GTF3C1-212ENST00000570129 KIF3BO15066 747 aa15.18■□□□□ 0.02
GTF3C1-212ENST00000570129 RSPH4AQ5TD94 716 aa15.18■□□□□ 0.02
GTF3C1-212ENST00000570129 DHX29Q7Z478 1369 aaKnown RBP15.18■□□□□ 0.02
GTF3C1-212ENST00000570129 TCOF1Q13428 1488 aaKnown RBP15.18■□□□□ 0.02
GTF3C1-212ENST00000570129 RTEL1-TNFRSF6BF6WH68 1400 aa15.17■□□□□ 0.02
GTF3C1-212ENST00000570129 RIMS1Q86UR5 1692 aaKnown RBP15.17■□□□□ 0.02
GTF3C1-212ENST00000570129 ARHGEF5Q12774 1597 aa15.17■□□□□ 0.02
GTF3C1-212ENST00000570129 DAPK1P53355 1430 aa15.16■□□□□ 0.02
GTF3C1-212ENST00000570129 AGLP35573 1532 aa15.15■□□□□ 0.02
GTF3C1-212ENST00000570129 REREQ9P2R6 1566 aa15.14■□□□□ 0.01
GTF3C1-212ENST00000570129 PLXNC1O60486 1568 aa15.13■□□□□ 0.01
GTF3C1-212ENST00000570129 HSPA2P54652 639 aa15.13■□□□□ 0.01
GTF3C1-212ENST00000570129 FBXO31Q5XUX0 539 aaPredicted RBP15.11■□□□□ 0.01
GTF3C1-212ENST00000570129 ADGBQ8N7X0 1667 aa15.11■□□□□ 0.01
GTF3C1-212ENST00000570129 ZMYM3Q14202 1370 aa15.1■□□□□ 0.01
GTF3C1-212ENST00000570129 KIF15Q9NS87 1388 aa15.1■□□□□ 0.01
GTF3C1-212ENST00000570129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.09■□□□□ 0.012e-11■□□□□ 10.8
GTF3C1-212ENST00000570129 MAST1Q9Y2H9 1570 aa15.08■□□□□ 0
GTF3C1-212ENST00000570129 ESF1Q9H501 851 aaKnown RBP15.08■□□□□ 0
GTF3C1-212ENST00000570129 FER1L4A9Z1Z3 1794 aa15.08■□□□□ 0
GTF3C1-212ENST00000570129 NCOA1Q15788 1441 aa15.08■□□□□ 0
GTF3C1-212ENST00000570129 DNMT1P26358 1616 aaKnown RBP15.07■□□□□ 0
GTF3C1-212ENST00000570129 WASHC2CQ9Y4E1 1318 aa15.04■□□□□ -0
GTF3C1-212ENST00000570129 LMTK3Q96Q04 1460 aa15.03■□□□□ -0
GTF3C1-212ENST00000570129 SHANK2Q9UPX8 1470 aa15.03■□□□□ -0
GTF3C1-212ENST00000570129 ANKRD30AQ9BXX3 1397 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms