RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 ADAMTSL3P82987 1691 aa36.4■■■■□ 3.42
RBFOX1-219ENST00000569895 ZFYVE16Q7Z3T8 1539 aa36.39■■■■□ 3.42
RBFOX1-219ENST00000569895 FYCO1Q9BQS8 1478 aa36.38■■■■□ 3.41
RBFOX1-219ENST00000569895 LRRIQ1Q96JM4 1722 aa36.37■■■■□ 3.41
RBFOX1-219ENST00000569895 ARHGAP5Q13017 1502 aa36.37■■■■□ 3.41
RBFOX1-219ENST00000569895 PTPRMP28827 1452 aa36.37■■■■□ 3.41
RBFOX1-219ENST00000569895 HECW2Q9P2P5 1572 aa36.36■■■■□ 3.41
RBFOX1-219ENST00000569895 BCORL1Q5H9F3 1711 aa36.35■■■■□ 3.41
RBFOX1-219ENST00000569895 YEATS2Q9ULM3 1422 aa36.34■■■■□ 3.41
RBFOX1-219ENST00000569895 ZNF518AQ6AHZ1 1483 aa36.28■■■■□ 3.4
RBFOX1-219ENST00000569895 AFAP1Q8N556 730 aa36.26■■■■□ 3.4
RBFOX1-219ENST00000569895 MYT1LQ9UL68 1186 aa36.26■■■■□ 3.4
RBFOX1-219ENST00000569895 ATP10AO60312 1499 aa36.25■■■■□ 3.39
RBFOX1-219ENST00000569895 MADDQ8WXG6 1647 aa36.23■■■■□ 3.39
RBFOX1-219ENST00000569895 MLECQ14165 292 aa36.2■■■■□ 3.39
RBFOX1-219ENST00000569895 C9orf84Q5VXU9 1444 aa36.19■■■■□ 3.38
RBFOX1-219ENST00000569895 CDC42BPBQ9Y5S2 1711 aa36.17■■■■□ 3.38
RBFOX1-219ENST00000569895 PREX2Q70Z35 1606 aa36.16■■■■□ 3.38
RBFOX1-219ENST00000569895 KDM5CP41229 1560 aa36.13■■■■□ 3.37
RBFOX1-219ENST00000569895 ZNF777Q9ULD5 760 aaPredicted RBP36.11■■■■□ 3.37
RBFOX1-219ENST00000569895 MTUS2Q5JR59 1369 aa36.11■■■■□ 3.37
RBFOX1-219ENST00000569895 RIMS1Q86UR5 1692 aaKnown RBP36.1■■■■□ 3.37
RBFOX1-219ENST00000569895 CEP162Q5TB80 1403 aa36.1■■■■□ 3.37
RBFOX1-219ENST00000569895 MLH3Q9UHC1 1453 aa36.08■■■■□ 3.37
RBFOX1-219ENST00000569895 PLPPR3Q6T4P5 718 aa36.08■■■■□ 3.37
RBFOX1-219ENST00000569895 ABCC1P33527 1531 aa36.08■■■■□ 3.37
RBFOX1-219ENST00000569895 TRAPPC8Q9Y2L5 1435 aa36.07■■■■□ 3.36
RBFOX1-219ENST00000569895 SIGLEC1Q9BZZ2 1709 aa36.06■■■■□ 3.36
RBFOX1-219ENST00000569895 GPATCH8Q9UKJ3 1502 aaKnown RBP36.05■■■■□ 3.36
RBFOX1-219ENST00000569895 CCNB3Q8WWL7 1395 aa36.04■■■■□ 3.36
RBFOX1-219ENST00000569895 ARHGEF12Q9NZN5 1544 aa36.04■■■■□ 3.36
RBFOX1-219ENST00000569895 CDC42BPAQ5VT25 1732 aa36.04■■■■□ 3.36
RBFOX1-219ENST00000569895 CFDP1Q9UEE9 299 aaPredicted RBP36.04■■■■□ 3.36
RBFOX1-219ENST00000569895 ITSN2Q9NZM3 1697 aa35.97■■■■□ 3.35
RBFOX1-219ENST00000569895 DIP2CQ9Y2E4 1556 aa35.96■■■■□ 3.35
RBFOX1-219ENST00000569895 HNRNPMP52272 730 aaKnown RBP eCLIP35.95■■■■□ 3.35
RBFOX1-219ENST00000569895 FER1L4A9Z1Z3 1794 aa35.94■■■■□ 3.34
RBFOX1-219ENST00000569895 REREQ9P2R6 1566 aa35.94■■■■□ 3.34
RBFOX1-219ENST00000569895 PLEKHH2Q8IVE3 1493 aa35.94■■■■□ 3.34
RBFOX1-219ENST00000569895 LMTK3Q96Q04 1460 aa35.94■■■■□ 3.34
RBFOX1-219ENST00000569895 KIAA1107Q9UPP5 1409 aa35.93■■■■□ 3.34
RBFOX1-219ENST00000569895 LOC105371045A0A1W2PR82 267 aa35.92■■■■□ 3.34
RBFOX1-219ENST00000569895 SPAG9O60271 1321 aaKnown RBP35.91■■■■□ 3.34
RBFOX1-219ENST00000569895 SAMD9LQ8IVG5 1584 aa35.9■■■■□ 3.34
RBFOX1-219ENST00000569895 ESF1Q9H501 851 aaKnown RBP35.9■■■■□ 3.34
RBFOX1-219ENST00000569895 ILDR1Q86SU0 546 aaPredicted RBP35.89■■■■□ 3.34
RBFOX1-219ENST00000569895 ABCA6Q8N139 1617 aa35.89■■■■□ 3.34
RBFOX1-219ENST00000569895 EHBP1L1Q8N3D4 1523 aa35.88■■■■□ 3.33
RBFOX1-219ENST00000569895 SYCP2Q9BX26 1530 aa35.88■■■■□ 3.33
RBFOX1-219ENST00000569895 AGLP35573 1532 aa35.87■■■■□ 3.33
RBFOX1-219ENST00000569895 CEBPAP49715 358 aaPredicted RBP35.84■■■■□ 3.33
RBFOX1-219ENST00000569895 KIDINS220Q9ULH0 1771 aa35.83■■■■□ 3.33
RBFOX1-219ENST00000569895 HSPA2P54652 639 aa35.82■■■■□ 3.32
RBFOX1-219ENST00000569895 TIAM1Q13009 1591 aa35.76■■■■□ 3.31
RBFOX1-219ENST00000569895 ZNF644Q9H582 1327 aaPredicted RBP35.75■■■■□ 3.31
RBFOX1-219ENST00000569895 VPS8Q8N3P4 1428 aa35.74■■■■□ 3.31
RBFOX1-219ENST00000569895 ATP7AQ04656 1500 aa35.72■■■■□ 3.31
RBFOX1-219ENST00000569895 CNTLNQ9NXG0 1405 aa35.71■■■■□ 3.31
RBFOX1-219ENST00000569895 NCOA2Q15596 1464 aa35.68■■■■□ 3.3
RBFOX1-219ENST00000569895 RSPH4AQ5TD94 716 aa35.67■■■■□ 3.3
RBFOX1-219ENST00000569895 A2MP01023 1474 aa35.66■■■■□ 3.3
RBFOX1-219ENST00000569895 SUPT6HQ7KZ85 1726 aaKnown RBP35.66■■■■□ 3.3
RBFOX1-219ENST00000569895 MBD5Q9P267 1494 aa35.65■■■■□ 3.3
RBFOX1-219ENST00000569895 UHRF1BP1Q6BDS2 1440 aa35.65■■■■□ 3.3
RBFOX1-219ENST00000569895 INO80Q9ULG1 1556 aaPredicted RBP35.64■■■■□ 3.3
RBFOX1-219ENST00000569895 PREX1Q8TCU6 1659 aa35.63■■■■□ 3.29
RBFOX1-219ENST00000569895 RTEL1-TNFRSF6BF6WH68 1400 aa35.61■■■■□ 3.29
RBFOX1-219ENST00000569895 SETD1BQ9UPS6 1966 aaKnown RBP35.6■■■■□ 3.29
RBFOX1-219ENST00000569895 LRRC9Q6ZRR7 1453 aa35.58■■■■□ 3.29
RBFOX1-219ENST00000569895 GGT6Q6P531 493 aa35.57■■■■□ 3.28
RBFOX1-219ENST00000569895 PPP6R1Q9UPN7 881 aa35.57■■■■□ 3.28
RBFOX1-219ENST00000569895 C3P01024 1663 aa35.56■■■■□ 3.28
RBFOX1-219ENST00000569895 FBXO41Q8TF61 875 aa35.56■■■■□ 3.28
RBFOX1-219ENST00000569895 DMRT2Q9Y5R5 561 aa35.55■■■■□ 3.28
RBFOX1-219ENST00000569895 PLXNC1O60486 1568 aa35.55■■■■□ 3.28
RBFOX1-219ENST00000569895 ZMYM3Q14202 1370 aa35.54■■■■□ 3.28
RBFOX1-219ENST00000569895 MAP3K1Q13233 1512 aa35.53■■■■□ 3.28
RBFOX1-219ENST00000569895 CAMSAP2Q08AD1 1489 aa35.53■■■■□ 3.28
RBFOX1-219ENST00000569895 CCDC141Q6ZP82 1450 aa35.52■■■■□ 3.28
RBFOX1-219ENST00000569895 TSPY4P0CV99 314 aa35.51■■■■□ 3.28
RBFOX1-219ENST00000569895 TSPY10P0CW01 314 aa35.51■■■■□ 3.28
RBFOX1-219ENST00000569895 ADGBQ8N7X0 1667 aa35.5■■■■□ 3.27
RBFOX1-219ENST00000569895 APLP2Q06481 763 aa35.5■■■■□ 3.27
RBFOX1-219ENST00000569895 DHX29Q7Z478 1369 aaKnown RBP35.5■■■■□ 3.27
RBFOX1-219ENST00000569895 KANK4Q5T7N3 995 aaPredicted RBP35.48■■■■□ 3.27
RBFOX1-219ENST00000569895 NPATQ14207 1427 aa35.48■■■■□ 3.27
RBFOX1-219ENST00000569895 MROH2AA6NES4 1674 aa35.46■■■■□ 3.27
RBFOX1-219ENST00000569895 KIF3BO15066 747 aa35.4■■■■□ 3.26
RBFOX1-219ENST00000569895 ARHGEF5Q12774 1597 aa35.38■■■■□ 3.25
RBFOX1-219ENST00000569895 CLTCQ00610 1675 aaKnown RBP35.37■■■■□ 3.25
RBFOX1-219ENST00000569895 MIA2Q96PC5 1412 aa35.36■■■■□ 3.25
RBFOX1-219ENST00000569895 CERKQ8TCT0 537 aa35.35■■■■□ 3.25
RBFOX1-219ENST00000569895 MYOM3Q5VTT5 1437 aa35.34■■■■□ 3.25
RBFOX1-219ENST00000569895 PTPRKQ15262 1439 aa35.31■■■■□ 3.24
RBFOX1-219ENST00000569895 STRCQ7RTU9 1775 aa35.3■■■■□ 3.24
RBFOX1-219ENST00000569895 PTPRTO14522 1441 aa35.28■■■■□ 3.24
RBFOX1-219ENST00000569895 WASHC2CQ9Y4E1 1318 aa35.28■■■■□ 3.24
RBFOX1-219ENST00000569895 NCOA1Q15788 1441 aa35.24■■■■□ 3.23
RBFOX1-219ENST00000569895 FAM135AQ9P2D6 1515 aa35.22■■■■□ 3.23
RBFOX1-219ENST00000569895 MAST1Q9Y2H9 1570 aa35.19■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms