RNA–Protein interactions for RNA: ENST00000569634.1

TNRC6A-218, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-218ENST00000569634 MMRN1Q13201 1228 aa12.26□□□□□ -0.45
TNRC6A-218ENST00000569634 FBXO22Q8NEZ5 403 aa12.23□□□□□ -0.45
TNRC6A-218ENST00000569634 PKD2Q13563 968 aa12.18□□□□□ -0.46
TNRC6A-218ENST00000569634 TMEM92Q6UXU6 159 aa12.18□□□□□ -0.46
TNRC6A-218ENST00000569634 MFRPQ9BY79 579 aa12.18□□□□□ -0.46
TNRC6A-218ENST00000569634 KRTAP3-3Q9BYR6 98 aa12.16□□□□□ -0.46
TNRC6A-218ENST00000569634 KRTAP3-2Q9BYR7 98 aa12.16□□□□□ -0.46
TNRC6A-218ENST00000569634 POTEB3A0JP26 581 aa12.15□□□□□ -0.46
TNRC6A-218ENST00000569634 POTEBQ6S5H4 581 aa12.15□□□□□ -0.46
TNRC6A-218ENST00000569634 GPR153Q6NV75 609 aa12.14□□□□□ -0.47
TNRC6A-218ENST00000569634 RGL2O15211 777 aa12.13□□□□□ -0.47
TNRC6A-218ENST00000569634 VARS2Q5ST30 1063 aaKnown RBP12.13□□□□□ -0.47
TNRC6A-218ENST00000569634 ZNF687Q8N1G0 1237 aa12.13□□□□□ -0.47
TNRC6A-218ENST00000569634 TMC2Q8TDI7 906 aa12.11□□□□□ -0.47
TNRC6A-218ENST00000569634 PTGER2P43116 358 aa12.09□□□□□ -0.47
TNRC6A-218ENST00000569634 KIF3CO14782 793 aa12.07□□□□□ -0.48
TNRC6A-218ENST00000569634 RYDENQ9NUL5 291 aaKnown RBP12.07□□□□□ -0.48
TNRC6A-218ENST00000569634 SLC34A2O95436 690 aa12.06□□□□□ -0.48
TNRC6A-218ENST00000569634 ARSIQ5FYB1 569 aa12.06□□□□□ -0.48
TNRC6A-218ENST00000569634 C2orf72A6NCS6 295 aa12.04□□□□□ -0.48
TNRC6A-218ENST00000569634 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
TNRC6A-218ENST00000569634 HS6ST3Q8IZP7 471 aa12.02□□□□□ -0.49
TNRC6A-218ENST00000569634 PSDA5PKW4 1024 aaPredicted RBP12□□□□□ -0.49
TNRC6A-218ENST00000569634 PBX2P40425 430 aa11.99□□□□□ -0.49
TNRC6A-218ENST00000569634 RNF166Q96A37 237 aaPredicted RBP11.96□□□□□ -0.49
TNRC6A-218ENST00000569634 MYT1LQ9UL68 1186 aa11.96□□□□□ -0.49
TNRC6A-218ENST00000569634 PCDHGA4Q9Y5G9 962 aa11.95□□□□□ -0.5
TNRC6A-218ENST00000569634 TBC1D12O60347 775 aa11.94□□□□□ -0.5
TNRC6A-218ENST00000569634 DNAJC5Q9H3Z4 198 aa11.92□□□□□ -0.5
TNRC6A-218ENST00000569634 NUDT7P0C024 238 aa11.91□□□□□ -0.5
TNRC6A-218ENST00000569634 CHGAP10645 457 aaKnown RBP11.91□□□□□ -0.5
TNRC6A-218ENST00000569634 FOXK1P85037 733 aa11.9□□□□□ -0.5
TNRC6A-218ENST00000569634 GPHNQ9NQX3 736 aaPredicted RBP11.9□□□□□ -0.5
TNRC6A-218ENST00000569634 PPP1R37O75864 691 aa11.89□□□□□ -0.51
TNRC6A-218ENST00000569634 ANKRD13DQ6ZTN6 518 aa11.89□□□□□ -0.51
TNRC6A-218ENST00000569634 KHSRPQ92945 711 aaKnown RBP eCLIP11.89□□□□□ -0.51
TNRC6A-218ENST00000569634 LSM11P83369 360 aaKnown RBP eCLIP11.88□□□□□ -0.51
TNRC6A-218ENST00000569634 PTCD2Q8WV60 388 aaKnown RBP11.88□□□□□ -0.51
TNRC6A-218ENST00000569634 LHX6Q9UPM6 363 aa11.86□□□□□ -0.51
TNRC6A-218ENST00000569634 PLPP6Q8IY26 295 aa11.83□□□□□ -0.52
TNRC6A-218ENST00000569634 ARHGAP33O14559 1287 aa11.81□□□□□ -0.52
TNRC6A-218ENST00000569634 KCNH8Q96L42 1107 aa11.81□□□□□ -0.52
TNRC6A-218ENST00000569634 PPP4R3BQ5MIZ7 849 aa11.78□□□□□ -0.52
TNRC6A-218ENST00000569634 TK2O00142 265 aa11.75□□□□□ -0.53
TNRC6A-218ENST00000569634 PDE4AP27815 886 aa11.75□□□□□ -0.53
TNRC6A-218ENST00000569634 DSG2Q14126 1118 aa11.75□□□□□ -0.53
TNRC6A-218ENST00000569634 KDM4FA0A1W2PPD8 638 aa11.73□□□□□ -0.53
TNRC6A-218ENST00000569634 STAC3Q96MF2 364 aa11.72□□□□□ -0.53
TNRC6A-218ENST00000569634 ADGRD1Q6QNK2 874 aa11.7□□□□□ -0.54
TNRC6A-218ENST00000569634 HCSTQ9UBK5 93 aa11.7□□□□□ -0.54
TNRC6A-218ENST00000569634 CRISPLD2Q9H0B8 497 aa11.69□□□□□ -0.54
TNRC6A-218ENST00000569634 AXIN2Q9Y2T1 843 aa11.69□□□□□ -0.54
TNRC6A-218ENST00000569634 NKX1-1Q15270 411 aaPredicted RBP11.68□□□□□ -0.54
TNRC6A-218ENST00000569634 PPP1R15BQ5SWA1 713 aa11.67□□□□□ -0.54
TNRC6A-218ENST00000569634 OXER1Q8TDS5 423 aa11.67□□□□□ -0.54
TNRC6A-218ENST00000569634 POTEEQ6S8J3 1075 aa11.66□□□□□ -0.54
TNRC6A-218ENST00000569634 DCAF8L2P0C7V8 631 aa11.61□□□□□ -0.55
TNRC6A-218ENST00000569634 DDX27Q96GQ7 796 aaKnown RBP11.6□□□□□ -0.55
TNRC6A-218ENST00000569634 GTPBP6O43824 516 aaPredicted RBP11.59□□□□□ -0.55
TNRC6A-218ENST00000569634 HRO43593 1189 aa11.58□□□□□ -0.56
TNRC6A-218ENST00000569634 PSEN2P49810 448 aa11.58□□□□□ -0.56
TNRC6A-218ENST00000569634 ZNF454Q8N9F8 522 aa11.58□□□□□ -0.56
TNRC6A-218ENST00000569634 UPF1Q92900 1129 aaKnown RBP eCLIP11.58□□□□□ -0.56
TNRC6A-218ENST00000569634 SLC4A5Q9BY07 1137 aa11.58□□□□□ -0.56
TNRC6A-218ENST00000569634 BCL2L12Q9HB09 334 aa11.58□□□□□ -0.56
TNRC6A-218ENST00000569634 KCNK17Q96T54 332 aa11.57□□□□□ -0.56
TNRC6A-218ENST00000569634 ANO8Q9HCE9 1232 aaPredicted RBP11.57□□□□□ -0.56
TNRC6A-218ENST00000569634 PTPREP23469 700 aa11.56□□□□□ -0.56
TNRC6A-218ENST00000569634 LARP6Q9BRS8 491 aaKnown RBP11.56□□□□□ -0.56
TNRC6A-218ENST00000569634 MAP3K9P80192 1104 aa11.55□□□□□ -0.56
TNRC6A-218ENST00000569634 DMRTA1Q5VZB9 504 aa11.55□□□□□ -0.56
TNRC6A-218ENST00000569634 NCKAP5LQ9HCH0 1330 aa11.55□□□□□ -0.56
TNRC6A-218ENST00000569634 JPH4Q96JJ6 628 aa11.54□□□□□ -0.56
TNRC6A-218ENST00000569634 FOSBP53539 338 aa11.53□□□□□ -0.56
TNRC6A-218ENST00000569634 EVI5O60447 810 aa11.52□□□□□ -0.57
TNRC6A-218ENST00000569634 MFSD10Q14728 455 aa11.52□□□□□ -0.57
TNRC6A-218ENST00000569634 PLA2G2EQ9NZK7 142 aa11.52□□□□□ -0.57
TNRC6A-218ENST00000569634 ZDHHC16Q969W1 377 aa11.51□□□□□ -0.57
TNRC6A-218ENST00000569634 VPS9D1Q9Y2B5 631 aa11.51□□□□□ -0.57
TNRC6A-218ENST00000569634 GOLGA8CPA6NN73 597 aa11.48□□□□□ -0.57
TNRC6A-218ENST00000569634 KCTD12Q96CX2 325 aaKnown RBP11.47□□□□□ -0.57
TNRC6A-218ENST00000569634 NBPF3Q9H094 633 aa11.47□□□□□ -0.57
TNRC6A-218ENST00000569634 FBXW7Q969H0 707 aa11.45□□□□□ -0.58
TNRC6A-218ENST00000569634 MRPL50Q8N5N7 158 aaKnown RBP11.43□□□□□ -0.58
TNRC6A-218ENST00000569634 ZBED2Q9BTP6 218 aa11.41□□□□□ -0.58
TNRC6A-218ENST00000569634 BHMG1C9JSJ3 638 aaPredicted RBP11.4□□□□□ -0.58
TNRC6A-218ENST00000569634 PHF14O94880 888 aa11.4□□□□□ -0.58
TNRC6A-218ENST00000569634 BBXQ8WY36 941 aaPredicted RBP11.4□□□□□ -0.58
TNRC6A-218ENST00000569634 PPP1R3GB7ZBB8 358 aa11.39□□□□□ -0.59
TNRC6A-218ENST00000569634 TYW1BQ6NUM6 668 aa11.39□□□□□ -0.59
TNRC6A-218ENST00000569634 EPAS1Q99814 870 aa11.38□□□□□ -0.59
TNRC6A-218ENST00000569634 ADAM33Q9BZ11 813 aa11.37□□□□□ -0.59
TNRC6A-218ENST00000569634 IFFO2Q5TF58 517 aa11.36□□□□□ -0.59
TNRC6A-218ENST00000569634 WNT2BQ93097 391 aa11.36□□□□□ -0.59
TNRC6A-218ENST00000569634 ONECUT3O60422 494 aaPredicted RBP11.35□□□□□ -0.59
TNRC6A-218ENST00000569634 PTPN5P54829 565 aa11.35□□□□□ -0.59
TNRC6A-218ENST00000569634 EMILIN3Q9NT22 766 aa11.35□□□□□ -0.59
TNRC6A-218ENST00000569634 RABGEF1Q9UJ41 708 aa11.35□□□□□ -0.59
TNRC6A-218ENST00000569634 RGS20O76081 388 aa11.34□□□□□ -0.59
TNRC6A-218ENST00000569634 CAMK2BQ13554 666 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms