RNA–Protein interactions for RNA: ENST00000569601.5

RPUSD1-210, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-210ENST00000569601 ARID4BQ4LE39 1312 aaPredicted RBP38.13■■■■□ 3.7
RPUSD1-210ENST00000569601 EFCAB2Q5VUJ9 269 aa38.12■■■■□ 3.69
RPUSD1-210ENST00000569601 POGZQ7Z3K3 1410 aa38.11■■■■□ 3.69
RPUSD1-210ENST00000569601 ZFYVE16Q7Z3T8 1539 aa38.1■■■■□ 3.69
RPUSD1-210ENST00000569601 FYCO1Q9BQS8 1478 aa38.09■■■■□ 3.69
RPUSD1-210ENST00000569601 YEATS2Q9ULM3 1422 aa38.08■■■■□ 3.69
RPUSD1-210ENST00000569601 ARHGAP5Q13017 1502 aa38.07■■■■□ 3.68
RPUSD1-210ENST00000569601 MAGI2Q86UL8 1455 aa38.06■■■■□ 3.68
RPUSD1-210ENST00000569601 MADDQ8WXG6 1647 aa38.05■■■■□ 3.68
RPUSD1-210ENST00000569601 PTPRMP28827 1452 aa38.05■■■■□ 3.68
RPUSD1-210ENST00000569601 CDC42BPBQ9Y5S2 1711 aa38.04■■■■□ 3.68
RPUSD1-210ENST00000569601 SIGLEC1Q9BZZ2 1709 aa38.03■■■■□ 3.68
RPUSD1-210ENST00000569601 PREX2Q70Z35 1606 aa37.98■■■■□ 3.67
RPUSD1-210ENST00000569601 RIMS1Q86UR5 1692 aaKnown RBP37.94■■■■□ 3.66
RPUSD1-210ENST00000569601 ZNF518AQ6AHZ1 1483 aa37.92■■■■□ 3.66
RPUSD1-210ENST00000569601 CDC42BPAQ5VT25 1732 aa37.92■■■■□ 3.66
RPUSD1-210ENST00000569601 KDM5CP41229 1560 aa37.89■■■■□ 3.66
RPUSD1-210ENST00000569601 ATP10AO60312 1499 aa37.88■■■■□ 3.65
RPUSD1-210ENST00000569601 AFAP1Q8N556 730 aa37.87■■■■□ 3.65
RPUSD1-210ENST00000569601 ABCC1P33527 1531 aa37.83■■■■□ 3.65
RPUSD1-210ENST00000569601 C9orf84Q5VXU9 1444 aa37.83■■■■□ 3.65
RPUSD1-210ENST00000569601 ITSN2Q9NZM3 1697 aa37.82■■■■□ 3.64
RPUSD1-210ENST00000569601 MLECQ14165 292 aa37.81■■■■□ 3.64
RPUSD1-210ENST00000569601 ARHGEF12Q9NZN5 1544 aa37.81■■■■□ 3.64
RPUSD1-210ENST00000569601 CEP162Q5TB80 1403 aa37.8■■■■□ 3.64
RPUSD1-210ENST00000569601 FER1L4A9Z1Z3 1794 aa37.78■■■■□ 3.64
RPUSD1-210ENST00000569601 TRAPPC8Q9Y2L5 1435 aa37.77■■■■□ 3.64
RPUSD1-210ENST00000569601 MYT1LQ9UL68 1186 aa37.75■■■■□ 3.63
RPUSD1-210ENST00000569601 DIP2CQ9Y2E4 1556 aa37.75■■■■□ 3.63
RPUSD1-210ENST00000569601 GPATCH8Q9UKJ3 1502 aaKnown RBP37.73■■■■□ 3.63
RPUSD1-210ENST00000569601 MLH3Q9UHC1 1453 aa37.72■■■■□ 3.63
RPUSD1-210ENST00000569601 ABCA6Q8N139 1617 aa37.72■■■■□ 3.63
RPUSD1-210ENST00000569601 SAMD9LQ8IVG5 1584 aa37.7■■■■□ 3.63
RPUSD1-210ENST00000569601 PLPPR3Q6T4P5 718 aa37.69■■■■□ 3.62
RPUSD1-210ENST00000569601 ZNF777Q9ULD5 760 aaPredicted RBP37.69■■■■□ 3.62
RPUSD1-210ENST00000569601 MTUS2Q5JR59 1369 aa37.68■■■■□ 3.62
RPUSD1-210ENST00000569601 LMTK3Q96Q04 1460 aa37.65■■■■□ 3.62
RPUSD1-210ENST00000569601 REREQ9P2R6 1566 aa37.65■■■■□ 3.62
RPUSD1-210ENST00000569601 KIDINS220Q9ULH0 1771 aa37.65■■■■□ 3.62
RPUSD1-210ENST00000569601 SYCP2Q9BX26 1530 aa37.62■■■■□ 3.61
RPUSD1-210ENST00000569601 CCNB3Q8WWL7 1395 aa37.62■■■■□ 3.61
RPUSD1-210ENST00000569601 EHBP1L1Q8N3D4 1523 aa37.6■■■■□ 3.61
RPUSD1-210ENST00000569601 LOC105371045A0A1W2PR82 267 aa37.59■■■■□ 3.61
RPUSD1-210ENST00000569601 CFDP1Q9UEE9 299 aaPredicted RBP37.58■■■■□ 3.61
RPUSD1-210ENST00000569601 HNRNPMP52272 730 aaKnown RBP eCLIP37.55■■■■□ 3.6
RPUSD1-210ENST00000569601 TIAM1Q13009 1591 aa37.54■■■■□ 3.6
RPUSD1-210ENST00000569601 AGLP35573 1532 aa37.52■■■■□ 3.6
RPUSD1-210ENST00000569601 PLEKHH2Q8IVE3 1493 aa37.52■■■■□ 3.6
RPUSD1-210ENST00000569601 KIAA1107Q9UPP5 1409 aa37.51■■■■□ 3.59
RPUSD1-210ENST00000569601 ILDR1Q86SU0 546 aaPredicted RBP37.48■■■■□ 3.59
RPUSD1-210ENST00000569601 SPAG9O60271 1321 aaKnown RBP37.47■■■■□ 3.59
RPUSD1-210ENST00000569601 CEBPAP49715 358 aaPredicted RBP37.47■■■■□ 3.59
RPUSD1-210ENST00000569601 HSPA2P54652 639 aa37.45■■■■□ 3.59
RPUSD1-210ENST00000569601 ATP7AQ04656 1500 aa37.43■■■■□ 3.58
RPUSD1-210ENST00000569601 INO80Q9ULG1 1556 aaPredicted RBP37.42■■■■□ 3.58
RPUSD1-210ENST00000569601 ZNF644Q9H582 1327 aaPredicted RBP37.41■■■■□ 3.58
RPUSD1-210ENST00000569601 SUPT6HQ7KZ85 1726 aaKnown RBP37.41■■■■□ 3.58
RPUSD1-210ENST00000569601 PREX1Q8TCU6 1659 aa37.41■■■■□ 3.58
RPUSD1-210ENST00000569601 VPS8Q8N3P4 1428 aa37.39■■■■□ 3.58
RPUSD1-210ENST00000569601 NCOA2Q15596 1464 aa37.37■■■■□ 3.57
RPUSD1-210ENST00000569601 C3P01024 1663 aa37.37■■■■□ 3.57
RPUSD1-210ENST00000569601 SETD1BQ9UPS6 1966 aaKnown RBP37.34■■■■□ 3.57
RPUSD1-210ENST00000569601 ESF1Q9H501 851 aaKnown RBP37.33■■■■□ 3.57
RPUSD1-210ENST00000569601 MBD5Q9P267 1494 aa37.33■■■■□ 3.57
RPUSD1-210ENST00000569601 PLXNC1O60486 1568 aa37.29■■■■□ 3.56
RPUSD1-210ENST00000569601 A2MP01023 1474 aa37.28■■■■□ 3.56
RPUSD1-210ENST00000569601 ADGBQ8N7X0 1667 aa37.26■■■■□ 3.56
RPUSD1-210ENST00000569601 CNTLNQ9NXG0 1405 aa37.25■■■■□ 3.55
RPUSD1-210ENST00000569601 LRRC9Q6ZRR7 1453 aa37.25■■■■□ 3.55
RPUSD1-210ENST00000569601 CAMSAP2Q08AD1 1489 aa37.23■■■■□ 3.55
RPUSD1-210ENST00000569601 UHRF1BP1Q6BDS2 1440 aa37.22■■■■□ 3.55
RPUSD1-210ENST00000569601 MROH2AA6NES4 1674 aa37.21■■■■□ 3.55
RPUSD1-210ENST00000569601 RTEL1-TNFRSF6BF6WH68 1400 aa37.19■■■■□ 3.54
RPUSD1-210ENST00000569601 CCDC141Q6ZP82 1450 aa37.16■■■■□ 3.54
RPUSD1-210ENST00000569601 MAP3K1Q13233 1512 aa37.15■■■■□ 3.54
RPUSD1-210ENST00000569601 CLTCQ00610 1675 aaKnown RBP37.15■■■■□ 3.54
RPUSD1-210ENST00000569601 KANK4Q5T7N3 995 aaPredicted RBP37.13■■■■□ 3.53
RPUSD1-210ENST00000569601 STRCQ7RTU9 1775 aa37.12■■■■□ 3.53
RPUSD1-210ENST00000569601 GGT6Q6P531 493 aa37.11■■■■□ 3.53
RPUSD1-210ENST00000569601 ZMYM3Q14202 1370 aa37.1■■■■□ 3.53
RPUSD1-210ENST00000569601 ARHGEF5Q12774 1597 aa37.08■■■■□ 3.53
RPUSD1-210ENST00000569601 RSPH4AQ5TD94 716 aa37.08■■■■□ 3.53
RPUSD1-210ENST00000569601 DHX29Q7Z478 1369 aaKnown RBP37.06■■■■□ 3.52
RPUSD1-210ENST00000569601 FBXO41Q8TF61 875 aa37.05■■■■□ 3.52
RPUSD1-210ENST00000569601 NPATQ14207 1427 aa37.04■■■■□ 3.52
RPUSD1-210ENST00000569601 PPP6R1Q9UPN7 881 aa36.99■■■■□ 3.51
RPUSD1-210ENST00000569601 MYOM3Q5VTT5 1437 aa36.97■■■■□ 3.51
RPUSD1-210ENST00000569601 TSPY4P0CV99 314 aa36.96■■■■□ 3.51
RPUSD1-210ENST00000569601 TSPY10P0CW01 314 aa36.96■■■■□ 3.51
RPUSD1-210ENST00000569601 KIF3BO15066 747 aa36.94■■■■□ 3.5
RPUSD1-210ENST00000569601 DMRT2Q9Y5R5 561 aa36.94■■■■□ 3.5
RPUSD1-210ENST00000569601 PTPRKQ15262 1439 aa36.93■■■■□ 3.5
RPUSD1-210ENST00000569601 MIA2Q96PC5 1412 aa36.93■■■■□ 3.5
RPUSD1-210ENST00000569601 MYO3AQ8NEV4 1616 aa36.9■■■■□ 3.5
RPUSD1-210ENST00000569601 APLP2Q06481 763 aa36.9■■■■□ 3.5
RPUSD1-210ENST00000569601 MAST1Q9Y2H9 1570 aa36.9■■■■□ 3.5
RPUSD1-210ENST00000569601 ZNF142P52746 1687 aaPredicted RBP36.87■■■■□ 3.49
RPUSD1-210ENST00000569601 NCOA1Q15788 1441 aa36.86■■■■□ 3.49
RPUSD1-210ENST00000569601 CERKQ8TCT0 537 aa36.86■■■■□ 3.49
RPUSD1-210ENST00000569601 CAMSAP1Q5T5Y3 1602 aa36.85■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms