RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 ARHGAP5Q13017 1502 aa21.93■■□□□ 1.1
HERPUD1-218ENST00000569569 CDC42BPAQ5VT25 1732 aa21.93■■□□□ 1.1
HERPUD1-218ENST00000569569 FRMPD1Q5SYB0 1578 aa21.92■■□□□ 1.1
HERPUD1-218ENST00000569569 ADGRL1O94910 1474 aa21.92■■□□□ 1.1
HERPUD1-218ENST00000569569 PREX2Q70Z35 1606 aa21.91■■□□□ 1.1
HERPUD1-218ENST00000569569 SCAPERQ9BY12 1400 aa21.89■■□□□ 1.1
HERPUD1-218ENST00000569569 EHBP1L1Q8N3D4 1523 aa21.88■■□□□ 1.09
HERPUD1-218ENST00000569569 TIAM1Q13009 1591 aa21.87■■□□□ 1.09
HERPUD1-218ENST00000569569 KDM4FA0A1W2PPD8 638 aa21.85■■□□□ 1.09
HERPUD1-218ENST00000569569 GPATCH8Q9UKJ3 1502 aaKnown RBP21.85■■□□□ 1.09
HERPUD1-218ENST00000569569 POGZQ7Z3K3 1410 aa21.83■■□□□ 1.09
HERPUD1-218ENST00000569569 CCNB3Q8WWL7 1395 aa21.83■■□□□ 1.08
HERPUD1-218ENST00000569569 ZMYM4Q5VZL5 1548 aa21.82■■□□□ 1.08
HERPUD1-218ENST00000569569 MAP3K1Q13233 1512 aa21.81■■□□□ 1.08
HERPUD1-218ENST00000569569 SUPT6HQ7KZ85 1726 aaKnown RBP21.81■■□□□ 1.08
HERPUD1-218ENST00000569569 MAGI2Q86UL8 1455 aa21.8■■□□□ 1.08
HERPUD1-218ENST00000569569 CFDP1Q9UEE9 299 aaPredicted RBP21.79■■□□□ 1.08
HERPUD1-218ENST00000569569 ZNF518AQ6AHZ1 1483 aa21.78■■□□□ 1.08
HERPUD1-218ENST00000569569 ZNF777Q9ULD5 760 aaPredicted RBP21.78■■□□□ 1.08
HERPUD1-218ENST00000569569 ABCC1P33527 1531 aa21.78■■□□□ 1.08
HERPUD1-218ENST00000569569 ARHGEF40Q8TER5 1519 aa21.78■■□□□ 1.08
HERPUD1-218ENST00000569569 ITSN2Q9NZM3 1697 aa21.78■■□□□ 1.08
HERPUD1-218ENST00000569569 LRRC9Q6ZRR7 1453 aa21.77■■□□□ 1.07
HERPUD1-218ENST00000569569 ZFYVE16Q7Z3T8 1539 aa21.76■■□□□ 1.07
HERPUD1-218ENST00000569569 APLP2Q06481 763 aa21.76■■□□□ 1.07
HERPUD1-218ENST00000569569 SAMD9LQ8IVG5 1584 aa21.76■■□□□ 1.07
HERPUD1-218ENST00000569569 AFAP1Q8N556 730 aa21.76■■□□□ 1.07
HERPUD1-218ENST00000569569 ARHGEF12Q9NZN5 1544 aa21.75■■□□□ 1.07
HERPUD1-218ENST00000569569 KDM5CP41229 1560 aa21.74■■□□□ 1.07
HERPUD1-218ENST00000569569 NCOA2Q15596 1464 aa21.74■■□□□ 1.07
HERPUD1-218ENST00000569569 YEATS2Q9ULM3 1422 aa21.73■■□□□ 1.07
HERPUD1-218ENST00000569569 KANK4Q5T7N3 995 aaPredicted RBP21.72■■□□□ 1.07
HERPUD1-218ENST00000569569 TRAPPC8Q9Y2L5 1435 aa21.72■■□□□ 1.07
HERPUD1-218ENST00000569569 PLEKHH2Q8IVE3 1493 aa21.71■■□□□ 1.07
HERPUD1-218ENST00000569569 MYT1LQ9UL68 1186 aa21.7■■□□□ 1.06
HERPUD1-218ENST00000569569 ARID4BQ4LE39 1312 aaPredicted RBP21.7■■□□□ 1.06
HERPUD1-218ENST00000569569 KIAA1107Q9UPP5 1409 aa21.7■■□□□ 1.06
HERPUD1-218ENST00000569569 HECW2Q9P2P5 1572 aa21.7■■□□□ 1.06
HERPUD1-218ENST00000569569 HNRNPMP52272 730 aaKnown RBP eCLIP21.69■■□□□ 1.06
HERPUD1-218ENST00000569569 SYCP2Q9BX26 1530 aa21.69■■□□□ 1.06
HERPUD1-218ENST00000569569 ATP10AO60312 1499 aa21.68■■□□□ 1.06
HERPUD1-218ENST00000569569 MLH3Q9UHC1 1453 aa21.68■■□□□ 1.06
HERPUD1-218ENST00000569569 BCORL1Q5H9F3 1711 aa21.67■■□□□ 1.06
HERPUD1-218ENST00000569569 ADAMTSL3P82987 1691 aa21.65■■□□□ 1.06
HERPUD1-218ENST00000569569 KIDINS220Q9ULH0 1771 aa21.64■■□□□ 1.06
HERPUD1-218ENST00000569569 SIGLEC1Q9BZZ2 1709 aa21.64■■□□□ 1.06
HERPUD1-218ENST00000569569 ZNF644Q9H582 1327 aaPredicted RBP21.64■■□□□ 1.05
HERPUD1-218ENST00000569569 C9orf84Q5VXU9 1444 aa21.63■■□□□ 1.05
HERPUD1-218ENST00000569569 DIP2CQ9Y2E4 1556 aa21.61■■□□□ 1.05
HERPUD1-218ENST00000569569 ABCA6Q8N139 1617 aa21.61■■□□□ 1.05
HERPUD1-218ENST00000569569 SPAG9O60271 1321 aaKnown RBP21.6■■□□□ 1.05
HERPUD1-218ENST00000569569 MBD5Q9P267 1494 aa21.59■■□□□ 1.05
HERPUD1-218ENST00000569569 CAMSAP2Q08AD1 1489 aa21.58■■□□□ 1.05
HERPUD1-218ENST00000569569 REREQ9P2R6 1566 aa21.58■■□□□ 1.05
HERPUD1-218ENST00000569569 RSPH4AQ5TD94 716 aa21.57■■□□□ 1.04
HERPUD1-218ENST00000569569 MYOM3Q5VTT5 1437 aa21.56■■□□□ 1.04
HERPUD1-218ENST00000569569 MADDQ8WXG6 1647 aa21.56■■□□□ 1.04
HERPUD1-218ENST00000569569 MIA2Q96PC5 1412 aa21.55■■□□□ 1.04
HERPUD1-218ENST00000569569 ATP7AQ04656 1500 aa21.55■■□□□ 1.04
HERPUD1-218ENST00000569569 INO80Q9ULG1 1556 aaPredicted RBP21.55■■□□□ 1.04
HERPUD1-218ENST00000569569 MLECQ14165 292 aa21.54■■□□□ 1.04
HERPUD1-218ENST00000569569 RIMS1Q86UR5 1692 aaKnown RBP21.52■■□□□ 1.04
HERPUD1-218ENST00000569569 PTPRMP28827 1452 aa21.52■■□□□ 1.03
HERPUD1-218ENST00000569569 CCDC141Q6ZP82 1450 aa21.52■■□□□ 1.03
HERPUD1-218ENST00000569569 FER1L4A9Z1Z3 1794 aa21.51■■□□□ 1.03
HERPUD1-218ENST00000569569 RTEL1-TNFRSF6BF6WH68 1400 aa21.51■■□□□ 1.03
HERPUD1-218ENST00000569569 ARHGEF5Q12774 1597 aa21.51■■□□□ 1.03
HERPUD1-218ENST00000569569 AGLP35573 1532 aa21.5■■□□□ 1.03
HERPUD1-218ENST00000569569 ADGBQ8N7X0 1667 aa21.49■■□□□ 1.03
HERPUD1-218ENST00000569569 TSPY4P0CV99 314 aa21.47■■□□□ 1.03
HERPUD1-218ENST00000569569 TSPY10P0CW01 314 aa21.47■■□□□ 1.03
HERPUD1-218ENST00000569569 A2MP01023 1474 aa21.45■■□□□ 1.03
HERPUD1-218ENST00000569569 PTPN23Q9H3S7 1636 aa21.45■■□□□ 1.02
HERPUD1-218ENST00000569569 PLXNC1O60486 1568 aa21.43■■□□□ 1.02
HERPUD1-218ENST00000569569 FGD6Q6ZV73 1430 aa21.42■■□□□ 1.02
HERPUD1-218ENST00000569569 MAST1Q9Y2H9 1570 aa21.4■■□□□ 1.02
HERPUD1-218ENST00000569569 DHX29Q7Z478 1369 aaKnown RBP21.39■■□□□ 1.02
HERPUD1-218ENST00000569569 TCOF1Q13428 1488 aaKnown RBP21.39■■□□□ 1.01
HERPUD1-218ENST00000569569 ESF1Q9H501 851 aaKnown RBP21.38■■□□□ 1.01
HERPUD1-218ENST00000569569 PLPPR3Q6T4P5 718 aa21.37■■□□□ 1.01
HERPUD1-218ENST00000569569 SETD1BQ9UPS6 1966 aaKnown RBP21.36■■□□□ 1.01
HERPUD1-218ENST00000569569 CROCC2H7BZ55 1655 aa21.35■■□□□ 1.01
HERPUD1-218ENST00000569569 DNMT1P26358 1616 aaKnown RBP21.34■■□□□ 1.01
HERPUD1-218ENST00000569569 ABCC5O15440 1437 aa21.33■■□□□ 1.01
HERPUD1-218ENST00000569569 GGT6Q6P531 493 aa21.33■■□□□ 1.01
HERPUD1-218ENST00000569569 CNTLNQ9NXG0 1405 aa21.32■■□□□ 1
HERPUD1-218ENST00000569569 C3P01024 1663 aa21.31■■□□□ 1
HERPUD1-218ENST00000569569 DAPK1P53355 1430 aa21.31■■□□□ 1
HERPUD1-218ENST00000569569 CEBPAP49715 358 aaPredicted RBP21.31■■□□□ 1
HERPUD1-218ENST00000569569 PPARGC1BQ86YN6 1023 aaKnown RBP21.31■■□□□ 1
HERPUD1-218ENST00000569569 PPP6R1Q9UPN7 881 aa21.31■■□□□ 1
HERPUD1-218ENST00000569569 SHANK2Q9UPX8 1470 aa21.31■■□□□ 1
HERPUD1-218ENST00000569569 KIF3BO15066 747 aa21.3■■□□□ 1
HERPUD1-218ENST00000569569 MROH2AA6NES4 1674 aa21.3■■□□□ 1
HERPUD1-218ENST00000569569 FAM50AQ14320 339 aaKnown RBP21.29■■□□□ 1
HERPUD1-218ENST00000569569 CLTCQ00610 1675 aaKnown RBP21.28■■□□□ 1
HERPUD1-218ENST00000569569 DUOX2Q9NRD8 1548 aa21.24■□□□□ 0.99
HERPUD1-218ENST00000569569 ZMYM3Q14202 1370 aa21.24■□□□□ 0.99
HERPUD1-218ENST00000569569 EIF2AK4Q9P2K8 1649 aaKnown RBP21.24■□□□□ 0.99
HERPUD1-218ENST00000569569 PREX1Q8TCU6 1659 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms