RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 FHAD1B1AJZ9 1412 aa8.93□□□□□ -0.98
CNOT1-216ENST00000569240 PDCL2Q8N4E4 241 aa8.92□□□□□ -0.98
CNOT1-216ENST00000569240 CAVIN1Q6NZI2 390 aaKnown RBP8.92□□□□□ -0.98
CNOT1-216ENST00000569240 RGS3P49796 1198 aa8.92□□□□□ -0.98
CNOT1-216ENST00000569240 SETD5Q9C0A6 1442 aa8.92□□□□□ -0.98
CNOT1-216ENST00000569240 CCDC34Q96HJ3 373 aa8.92□□□□□ -0.98
CNOT1-216ENST00000569240 VPS8Q8N3P4 1428 aa8.92□□□□□ -0.98
CNOT1-216ENST00000569240 IPO8O15397 1037 aaKnown RBP8.91□□□□□ -0.98
CNOT1-216ENST00000569240 ZNF771Q7L3S4 317 aaPredicted RBP8.91□□□□□ -0.98
CNOT1-216ENST00000569240 EIF3AQ14152 1382 aaKnown RBP8.91□□□□□ -0.98
CNOT1-216ENST00000569240 PDE4AP27815 886 aa8.91□□□□□ -0.98
CNOT1-216ENST00000569240 CHMP5Q9NZZ3 219 aa8.91□□□□□ -0.98
CNOT1-216ENST00000569240 ATP6V1DQ9Y5K8 247 aa8.91□□□□□ -0.98
CNOT1-216ENST00000569240 KIF16BQ96L93 1317 aa8.91□□□□□ -0.98
CNOT1-216ENST00000569240 DRC7Q8IY82 874 aa8.9□□□□□ -0.98
CNOT1-216ENST00000569240 ARGLU1Q9NWB6 273 aaPredicted RBP8.9□□□□□ -0.99
CNOT1-216ENST00000569240 CHMP4AQ9BY43 222 aa8.9□□□□□ -0.99
CNOT1-216ENST00000569240 ACBD3Q9H3P7 528 aa8.9□□□□□ -0.99
CNOT1-216ENST00000569240 APPP05067 770 aa8.89□□□□□ -0.99
CNOT1-216ENST00000569240 CCDC39Q9UFE4 941 aa8.88□□□□□ -0.99
CNOT1-216ENST00000569240 KTN1Q86UP2 1357 aaKnown RBP8.88□□□□□ -0.99
CNOT1-216ENST00000569240 RB1CC1Q8TDY2 1594 aa8.88□□□□□ -0.99
CNOT1-216ENST00000569240 USP8P40818 1118 aa8.87□□□□□ -0.99
CNOT1-216ENST00000569240 TSPY4P0CV99 314 aa8.87□□□□□ -0.99
CNOT1-216ENST00000569240 TSPY10P0CW01 314 aa8.87□□□□□ -0.99
CNOT1-216ENST00000569240 PLCB2Q00722 1185 aa8.87□□□□□ -0.99
CNOT1-216ENST00000569240 PDCL3Q9H2J4 239 aa8.87□□□□□ -0.99
CNOT1-216ENST00000569240 CCDC173Q0VFZ6 552 aa8.87□□□□□ -0.99
CNOT1-216ENST00000569240 CGNL1Q0VF96 1302 aa8.87□□□□□ -0.99
CNOT1-216ENST00000569240 KIF3AQ9Y496 699 aa8.86□□□□□ -0.99
CNOT1-216ENST00000569240 SALL2Q9Y467 1007 aaPredicted RBP8.85□□□□□ -0.99
CNOT1-216ENST00000569240 ST18O60284 1047 aa8.85□□□□□ -0.99
CNOT1-216ENST00000569240 NUCB2P80303 420 aa8.84□□□□□ -0.99
CNOT1-216ENST00000569240 PPP1R15AO75807 674 aaPredicted RBP8.84□□□□□ -0.99
CNOT1-216ENST00000569240 CCDC70Q6NSX1 233 aa8.83□□□□□ -1
CNOT1-216ENST00000569240 NLRP13Q86W25 1043 aa8.83□□□□□ -1
CNOT1-216ENST00000569240 HDAC5Q9UQL6 1122 aa8.83□□□□□ -1
CNOT1-216ENST00000569240 LETM1O95202 739 aaPredicted RBP8.83□□□□□ -1
CNOT1-216ENST00000569240 NFKBIBQ15653 356 aa8.83□□□□□ -1
CNOT1-216ENST00000569240 CARD11Q9BXL7 1154 aa8.83□□□□□ -1
CNOT1-216ENST00000569240 ANO8Q9HCE9 1232 aaPredicted RBP8.82□□□□□ -1
CNOT1-216ENST00000569240 FAM13BQ9NYF5 915 aa8.82□□□□□ -1
CNOT1-216ENST00000569240 TMF1P82094 1093 aa8.82□□□□□ -1
CNOT1-216ENST00000569240 RNF20Q5VTR2 975 aa8.82□□□□□ -1
CNOT1-216ENST00000569240 SLKQ9H2G2 1235 aaPredicted RBP8.81□□□□□ -1
CNOT1-216ENST00000569240 DDX49Q9Y6V7 483 aaKnown RBP8.81□□□□□ -1
CNOT1-216ENST00000569240 CCP110O43303 1012 aa8.81□□□□□ -1
CNOT1-216ENST00000569240 ERCC4Q92889 916 aaPredicted RBP8.81□□□□□ -1
CNOT1-216ENST00000569240 MBD3O95983 291 aa8.81□□□□□ -1
CNOT1-216ENST00000569240 CDR1P51861 262 aa8.81□□□□□ -1
CNOT1-216ENST00000569240 C11orf95C9JLR9 678 aaPredicted RBP8.8□□□□□ -1
CNOT1-216ENST00000569240 MCM5P33992 734 aa8.8□□□□□ -1
CNOT1-216ENST00000569240 KIF27Q86VH2 1401 aa8.8□□□□□ -1
CNOT1-216ENST00000569240 CIZ1Q9ULV3 898 aaPredicted RBP8.8□□□□□ -1
CNOT1-216ENST00000569240 IL27Q8NEV9 243 aa8.8□□□□□ -1
CNOT1-216ENST00000569240 GZF1Q9H116 711 aaPredicted RBP8.79□□□□□ -1
CNOT1-216ENST00000569240 KIF15Q9NS87 1388 aa8.79□□□□□ -1
CNOT1-216ENST00000569240 RRP1P56182 461 aaKnown RBP8.79□□□□□ -1
CNOT1-216ENST00000569240 GOLGA2Q08379 1002 aa8.78□□□□□ -1
CNOT1-216ENST00000569240 CALCOCO1Q9P1Z2 691 aa8.78□□□□□ -1
CNOT1-216ENST00000569240 PDIA4P13667 645 aaKnown RBP8.78□□□□□ -1
CNOT1-216ENST00000569240 AK7Q96M32 723 aa8.77□□□□□ -1
CNOT1-216ENST00000569240 HSPA5P11021 654 aaKnown RBP8.77□□□□□ -1.01
CNOT1-216ENST00000569240 NINLQ9Y2I6 1382 aa8.77□□□□□ -1.01
CNOT1-216ENST00000569240 ANKRD30AQ9BXX3 1397 aa8.77□□□□□ -1.01
CNOT1-216ENST00000569240 KIAA1211Q6ZU35 1233 aa8.77□□□□□ -1.01
CNOT1-216ENST00000569240 FAM107BQ9H098 131 aa8.77□□□□□ -1.01
CNOT1-216ENST00000569240 BAZ1BQ9UIG0 1483 aaKnown RBP8.77□□□□□ -1.01
CNOT1-216ENST00000569240 HMMRO75330 724 aa8.76□□□□□ -1.01
CNOT1-216ENST00000569240 FMN1Q68DA7 1419 aa8.76□□□□□ -1.01
CNOT1-216ENST00000569240 HSP90B2PQ58FF3 399 aa8.76□□□□□ -1.01
CNOT1-216ENST00000569240 ESPNB1AK53 854 aa8.76□□□□□ -1.01
CNOT1-216ENST00000569240 RDXP35241 583 aaKnown RBP8.76□□□□□ -1.01
CNOT1-216ENST00000569240 NASPP49321 788 aaPredicted RBP8.76□□□□□ -1.01
CNOT1-216ENST00000569240 NOC3LQ8WTT2 800 aaKnown RBP8.76□□□□□ -1.01
CNOT1-216ENST00000569240 MYBBP1AQ9BQG0 1328 aaKnown RBP8.76□□□□□ -1.01
CNOT1-216ENST00000569240 KIF2AO00139 706 aaPredicted RBP8.75□□□□□ -1.01
CNOT1-216ENST00000569240 CTR9Q6PD62 1173 aa8.75□□□□□ -1.01
CNOT1-216ENST00000569240 FAM184AQ8NB25 1140 aa8.75□□□□□ -1.01
CNOT1-216ENST00000569240 PDE4CQ08493 712 aa8.75□□□□□ -1.01
CNOT1-216ENST00000569240 FRAT1Q92837 279 aaPredicted RBP8.75□□□□□ -1.01
CNOT1-216ENST00000569240 DEF6Q9H4E7 631 aa8.75□□□□□ -1.01
CNOT1-216ENST00000569240 DCTN1Q14203 1278 aa8.75□□□□□ -1.01
CNOT1-216ENST00000569240 DHX57Q6P158 1386 aaKnown RBP8.74□□□□□ -1.01
CNOT1-216ENST00000569240 GOLGA6L19H0YKK7 550 aa8.74□□□□□ -1.01
CNOT1-216ENST00000569240 ZSCAN30Q86W11 494 aa8.74□□□□□ -1.01
CNOT1-216ENST00000569240 FGD1P98174 961 aa8.74□□□□□ -1.01
CNOT1-216ENST00000569240 ARHGAP35Q9NRY4 1499 aa8.74□□□□□ -1.01
CNOT1-216ENST00000569240 TPM1P09493 284 aa8.74□□□□□ -1.01
CNOT1-216ENST00000569240 KCNJ4P48050 445 aa8.73□□□□□ -1.01
CNOT1-216ENST00000569240 CREBRFQ8IUR6 639 aa8.73□□□□□ -1.01
CNOT1-216ENST00000569240 LEKR1Q6ZMV7 388 aa8.73□□□□□ -1.01
CNOT1-216ENST00000569240 MCM2P49736 904 aa8.73□□□□□ -1.01
CNOT1-216ENST00000569240 REC8O95072 547 aa8.73□□□□□ -1.01
CNOT1-216ENST00000569240 RAB3GAP2Q9H2M9 1393 aa8.72□□□□□ -1.01
CNOT1-216ENST00000569240 CENPJQ9HC77 1338 aaPredicted RBP8.72□□□□□ -1.01
CNOT1-216ENST00000569240 CCDC191Q8NCU4 936 aa8.72□□□□□ -1.01
CNOT1-216ENST00000569240 PRKRIP1Q9H875 184 aaPredicted RBP8.72□□□□□ -1.01
CNOT1-216ENST00000569240 E9PSI1 815 aa8.72□□□□□ -1.01
CNOT1-216ENST00000569240 GTPBP4Q9BZE4 634 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms