RNA–Protein interactions for RNA: ENST00000569093.1

CCNF-205, Transcript of cyclin F, humanhuman

TSL 2

Gene CCNF, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-205ENST00000569093 CDC42BPBQ9Y5S2 1711 aa40.53■■■■■ 4.08
CCNF-205ENST00000569093 POGZQ7Z3K3 1410 aa40.5■■■■■ 4.07
CCNF-205ENST00000569093 ZMYM4Q5VZL5 1548 aa40.48■■■■■ 4.07
CCNF-205ENST00000569093 ARHGEF40Q8TER5 1519 aa40.47■■■■■ 4.07
CCNF-205ENST00000569093 PREX2Q70Z35 1606 aa40.46■■■■■ 4.07
CCNF-205ENST00000569093 YEATS2Q9ULM3 1422 aa40.44■■■■■ 4.06
CCNF-205ENST00000569093 CDC42BPAQ5VT25 1732 aa40.43■■■■■ 4.06
CCNF-205ENST00000569093 ARID4BQ4LE39 1312 aaPredicted RBP40.42■■■■■ 4.06
CCNF-205ENST00000569093 ZFYVE16Q7Z3T8 1539 aa40.41■■■■■ 4.06
CCNF-205ENST00000569093 MAGI2Q86UL8 1455 aa40.39■■■■■ 4.06
CCNF-205ENST00000569093 MTUS2Q5JR59 1369 aa40.38■■■■■ 4.06
CCNF-205ENST00000569093 AFAP1Q8N556 730 aa40.38■■■■■ 4.05
CCNF-205ENST00000569093 GPATCH8Q9UKJ3 1502 aaKnown RBP40.33■■■■■ 4.05
CCNF-205ENST00000569093 ADAMTSL3P82987 1691 aa40.33■■■■■ 4.05
CCNF-205ENST00000569093 ZNF518AQ6AHZ1 1483 aa40.32■■■■■ 4.04
CCNF-205ENST00000569093 ARHGEF12Q9NZN5 1544 aa40.32■■■■■ 4.04
CCNF-205ENST00000569093 BCORL1Q5H9F3 1711 aa40.31■■■■■ 4.04
CCNF-205ENST00000569093 ZNF777Q9ULD5 760 aaPredicted RBP40.3■■■■■ 4.04
CCNF-205ENST00000569093 ABCC1P33527 1531 aa40.29■■■■■ 4.04
CCNF-205ENST00000569093 SIGLEC1Q9BZZ2 1709 aa40.29■■■■■ 4.04
CCNF-205ENST00000569093 TRAPPC8Q9Y2L5 1435 aa40.26■■■■■ 4.04
CCNF-205ENST00000569093 KDM5CP41229 1560 aa40.26■■■■■ 4.04
CCNF-205ENST00000569093 VPS8Q8N3P4 1428 aa40.25■■■■■ 4.03
CCNF-205ENST00000569093 CCNB3Q8WWL7 1395 aa40.25■■■■■ 4.03
CCNF-205ENST00000569093 EHBP1L1Q8N3D4 1523 aa40.24■■■■■ 4.03
CCNF-205ENST00000569093 ITSN2Q9NZM3 1697 aa40.24■■■■■ 4.03
CCNF-205ENST00000569093 MYT1LQ9UL68 1186 aa40.23■■■■■ 4.03
CCNF-205ENST00000569093 ATP10AO60312 1499 aa40.22■■■■■ 4.03
CCNF-205ENST00000569093 CFDP1Q9UEE9 299 aaPredicted RBP40.21■■■■■ 4.03
CCNF-205ENST00000569093 SAMD9LQ8IVG5 1584 aa40.21■■■■■ 4.03
CCNF-205ENST00000569093 MADDQ8WXG6 1647 aa40.2■■■■■ 4.03
CCNF-205ENST00000569093 PTPRMP28827 1452 aa40.17■■■■■ 4.02
CCNF-205ENST00000569093 HECW2Q9P2P5 1572 aa40.16■■■■■ 4.02
CCNF-205ENST00000569093 TIAM1Q13009 1591 aa40.15■■■■■ 4.02
CCNF-205ENST00000569093 HNRNPMP52272 730 aaKnown RBP eCLIP40.15■■■■■ 4.02
CCNF-205ENST00000569093 MLECQ14165 292 aa40.15■■■■■ 4.02
CCNF-205ENST00000569093 C9orf84Q5VXU9 1444 aa40.14■■■■■ 4.02
CCNF-205ENST00000569093 MLH3Q9UHC1 1453 aa40.13■■■■■ 4.01
CCNF-205ENST00000569093 SYCP2Q9BX26 1530 aa40.11■■■■■ 4.01
CCNF-205ENST00000569093 DIP2CQ9Y2E4 1556 aa40.1■■■■■ 4.01
CCNF-205ENST00000569093 RIMS1Q86UR5 1692 aaKnown RBP40.08■■■■■ 4.01
CCNF-205ENST00000569093 ABCA6Q8N139 1617 aa40.07■■■■■ 4.01
CCNF-205ENST00000569093 ZNF644Q9H582 1327 aaPredicted RBP40.06■■■■■ 4
CCNF-205ENST00000569093 NCOA2Q15596 1464 aa40.05■■■■■ 4
CCNF-205ENST00000569093 SUPT6HQ7KZ85 1726 aaKnown RBP40.05■■■■■ 4
CCNF-205ENST00000569093 KIDINS220Q9ULH0 1771 aa40.04■■■■■ 4
CCNF-205ENST00000569093 KIAA1107Q9UPP5 1409 aa40.03■■■■■ 4
CCNF-205ENST00000569093 PLEKHH2Q8IVE3 1493 aa40.02■■■■■ 4
CCNF-205ENST00000569093 LRRC9Q6ZRR7 1453 aa40■■■■□ 3.99
CCNF-205ENST00000569093 KANK4Q5T7N3 995 aaPredicted RBP39.99■■■■□ 3.99
CCNF-205ENST00000569093 SPAG9O60271 1321 aaKnown RBP39.97■■■■□ 3.99
CCNF-205ENST00000569093 PLPPR3Q6T4P5 718 aa39.96■■■■□ 3.99
CCNF-205ENST00000569093 REREQ9P2R6 1566 aa39.95■■■■□ 3.99
CCNF-205ENST00000569093 FER1L4A9Z1Z3 1794 aa39.95■■■■□ 3.99
CCNF-205ENST00000569093 MAP3K1Q13233 1512 aa39.93■■■■□ 3.98
CCNF-205ENST00000569093 MBD5Q9P267 1494 aa39.88■■■■□ 3.98
CCNF-205ENST00000569093 ATP7AQ04656 1500 aa39.86■■■■□ 3.97
CCNF-205ENST00000569093 AGLP35573 1532 aa39.84■■■■□ 3.97
CCNF-205ENST00000569093 INO80Q9ULG1 1556 aaPredicted RBP39.84■■■■□ 3.97
CCNF-205ENST00000569093 CAMSAP2Q08AD1 1489 aa39.81■■■■□ 3.96
CCNF-205ENST00000569093 APLP2Q06481 763 aa39.79■■■■□ 3.96
CCNF-205ENST00000569093 CEBPAP49715 358 aaPredicted RBP39.77■■■■□ 3.96
CCNF-205ENST00000569093 A2MP01023 1474 aa39.71■■■■□ 3.95
CCNF-205ENST00000569093 CCDC141Q6ZP82 1450 aa39.69■■■■□ 3.94
CCNF-205ENST00000569093 LMTK3Q96Q04 1460 aa39.69■■■■□ 3.94
CCNF-205ENST00000569093 RTEL1-TNFRSF6BF6WH68 1400 aa39.67■■■■□ 3.94
CCNF-205ENST00000569093 RSPH4AQ5TD94 716 aa39.66■■■■□ 3.94
CCNF-205ENST00000569093 ESF1Q9H501 851 aaKnown RBP39.66■■■■□ 3.94
CCNF-205ENST00000569093 PLXNC1O60486 1568 aa39.66■■■■□ 3.94
CCNF-205ENST00000569093 MYOM3Q5VTT5 1437 aa39.65■■■■□ 3.94
CCNF-205ENST00000569093 ADGBQ8N7X0 1667 aa39.64■■■■□ 3.94
CCNF-205ENST00000569093 ARHGEF5Q12774 1597 aa39.61■■■■□ 3.93
CCNF-205ENST00000569093 MIA2Q96PC5 1412 aa39.59■■■■□ 3.93
CCNF-205ENST00000569093 HSPA2P54652 639 aa39.58■■■■□ 3.93
CCNF-205ENST00000569093 C3P01024 1663 aa39.57■■■■□ 3.93
CCNF-205ENST00000569093 TSPY4P0CV99 314 aa39.56■■■■□ 3.92
CCNF-205ENST00000569093 TSPY10P0CW01 314 aa39.56■■■■□ 3.92
CCNF-205ENST00000569093 GGT6Q6P531 493 aa39.55■■■■□ 3.92
CCNF-205ENST00000569093 DHX29Q7Z478 1369 aaKnown RBP39.54■■■■□ 3.92
CCNF-205ENST00000569093 CNTLNQ9NXG0 1405 aa39.52■■■■□ 3.92
CCNF-205ENST00000569093 PREX1Q8TCU6 1659 aa39.48■■■■□ 3.91
CCNF-205ENST00000569093 CLTCQ00610 1675 aaKnown RBP39.45■■■■□ 3.91
CCNF-205ENST00000569093 SETD1BQ9UPS6 1966 aaKnown RBP39.45■■■■□ 3.91
CCNF-205ENST00000569093 ZMYM3Q14202 1370 aa39.44■■■■□ 3.9
CCNF-205ENST00000569093 KIF3BO15066 747 aa39.43■■■■□ 3.9
CCNF-205ENST00000569093 MROH2AA6NES4 1674 aa39.43■■■■□ 3.9
CCNF-205ENST00000569093 PTPN23Q9H3S7 1636 aa39.42■■■■□ 3.9
CCNF-205ENST00000569093 MAST1Q9Y2H9 1570 aa39.41■■■■□ 3.9
CCNF-205ENST00000569093 FGD6Q6ZV73 1430 aa39.38■■■■□ 3.89
CCNF-205ENST00000569093 UHRF1BP1Q6BDS2 1440 aa39.37■■■■□ 3.89
CCNF-205ENST00000569093 PPP6R1Q9UPN7 881 aa39.36■■■■□ 3.89
CCNF-205ENST00000569093 ABCC5O15440 1437 aa39.32■■■■□ 3.89
CCNF-205ENST00000569093 TCOF1Q13428 1488 aaKnown RBP39.3■■■■□ 3.88
CCNF-205ENST00000569093 NPATQ14207 1427 aa39.28■■■■□ 3.88
CCNF-205ENST00000569093 CROCC2H7BZ55 1655 aa39.25■■■■□ 3.87
CCNF-205ENST00000569093 DAPK1P53355 1430 aa39.24■■■■□ 3.87
CCNF-205ENST00000569093 PTPRKQ15262 1439 aa39.23■■■■□ 3.87
CCNF-205ENST00000569093 DNMT1P26358 1616 aaKnown RBP39.23■■■■□ 3.87
CCNF-205ENST00000569093 WASHC2CQ9Y4E1 1318 aa39.2■■■■□ 3.87
CCNF-205ENST00000569093 SHANK2Q9UPX8 1470 aa39.2■■■■□ 3.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms