RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 MAGI2Q86UL8 1455 aa22.41■■□□□ 1.18
CNOT1-215ENST00000569020 SCAPERQ9BY12 1400 aa22.4■■□□□ 1.18
CNOT1-215ENST00000569020 ILDR1Q86SU0 546 aaPredicted RBP22.39■■□□□ 1.17
CNOT1-215ENST00000569020 POGZQ7Z3K3 1410 aa22.39■■□□□ 1.17
CNOT1-215ENST00000569020 CLIP1P30622 1438 aa22.38■■□□□ 1.17
CNOT1-215ENST00000569020 TROQ12816 1431 aaPredicted RBP22.38■■□□□ 1.17
CNOT1-215ENST00000569020 EFCAB2Q5VUJ9 269 aa22.37■■□□□ 1.17
CNOT1-215ENST00000569020 YEATS2Q9ULM3 1422 aa22.37■■□□□ 1.17
CNOT1-215ENST00000569020 SIGLEC1Q9BZZ2 1709 aa22.35■■□□□ 1.17
CNOT1-215ENST00000569020 ARHGAP5Q13017 1502 aa22.33■■□□□ 1.17
CNOT1-215ENST00000569020 PCF11O94913 1555 aaKnown RBP22.32■■□□□ 1.16
CNOT1-215ENST00000569020 CCDC18Q5T9S5 1454 aa22.31■■□□□ 1.16
CNOT1-215ENST00000569020 FER1L4A9Z1Z3 1794 aa22.3■■□□□ 1.16
CNOT1-215ENST00000569020 CDC42BPBQ9Y5S2 1711 aa22.3■■□□□ 1.16
CNOT1-215ENST00000569020 CASKIN1Q8WXD9 1431 aa22.3■■□□□ 1.16
CNOT1-215ENST00000569020 ZNF518AQ6AHZ1 1483 aa22.28■■□□□ 1.16
CNOT1-215ENST00000569020 ATP10AO60312 1499 aa22.28■■□□□ 1.16
CNOT1-215ENST00000569020 PHF23Q9BUL5 403 aaPredicted RBP22.27■■□□□ 1.16
CNOT1-215ENST00000569020 C9orf84Q5VXU9 1444 aa22.26■■□□□ 1.15
CNOT1-215ENST00000569020 MLECQ14165 292 aa22.26■■□□□ 1.15
CNOT1-215ENST00000569020 PREX2Q70Z35 1606 aa22.26■■□□□ 1.15
CNOT1-215ENST00000569020 LMTK3Q96Q04 1460 aa22.26■■□□□ 1.15
CNOT1-215ENST00000569020 KDM5CP41229 1560 aa22.25■■□□□ 1.15
CNOT1-215ENST00000569020 PLPPR3Q6T4P5 718 aa22.24■■□□□ 1.15
CNOT1-215ENST00000569020 FYCO1Q9BQS8 1478 aa22.22■■□□□ 1.15
CNOT1-215ENST00000569020 MYT1LQ9UL68 1186 aa22.22■■□□□ 1.15
CNOT1-215ENST00000569020 AFAP1Q8N556 730 aa22.21■■□□□ 1.15
CNOT1-215ENST00000569020 CDC42BPAQ5VT25 1732 aa22.2■■□□□ 1.14
CNOT1-215ENST00000569020 ARHGEF12Q9NZN5 1544 aa22.2■■□□□ 1.14
CNOT1-215ENST00000569020 ITSN2Q9NZM3 1697 aa22.19■■□□□ 1.14
CNOT1-215ENST00000569020 ABCC1P33527 1531 aa22.17■■□□□ 1.14
CNOT1-215ENST00000569020 DIP2CQ9Y2E4 1556 aa22.16■■□□□ 1.14
CNOT1-215ENST00000569020 REREQ9P2R6 1566 aa22.15■■□□□ 1.14
CNOT1-215ENST00000569020 MLH3Q9UHC1 1453 aa22.15■■□□□ 1.14
CNOT1-215ENST00000569020 ABCA6Q8N139 1617 aa22.14■■□□□ 1.14
CNOT1-215ENST00000569020 PREX1Q8TCU6 1659 aa22.12■■□□□ 1.13
CNOT1-215ENST00000569020 HSPA2P54652 639 aa22.12■■□□□ 1.13
CNOT1-215ENST00000569020 TRAPPC8Q9Y2L5 1435 aa22.12■■□□□ 1.13
CNOT1-215ENST00000569020 KIDINS220Q9ULH0 1771 aa22.09■■□□□ 1.13
CNOT1-215ENST00000569020 FBXO41Q8TF61 875 aa22.08■■□□□ 1.13
CNOT1-215ENST00000569020 ZNF777Q9ULD5 760 aaPredicted RBP22.07■■□□□ 1.12
CNOT1-215ENST00000569020 SAMD9LQ8IVG5 1584 aa22.07■■□□□ 1.12
CNOT1-215ENST00000569020 AGLP35573 1532 aa22.06■■□□□ 1.12
CNOT1-215ENST00000569020 CEBPAP49715 358 aaPredicted RBP22.05■■□□□ 1.12
CNOT1-215ENST00000569020 GPATCH8Q9UKJ3 1502 aaKnown RBP22.05■■□□□ 1.12
CNOT1-215ENST00000569020 SETD1BQ9UPS6 1966 aaKnown RBP22.04■■□□□ 1.12
CNOT1-215ENST00000569020 SYCP2Q9BX26 1530 aa22.03■■□□□ 1.12
CNOT1-215ENST00000569020 C3P01024 1663 aa22.03■■□□□ 1.12
CNOT1-215ENST00000569020 ESF1Q9H501 851 aaKnown RBP22.02■■□□□ 1.12
CNOT1-215ENST00000569020 MTUS2Q5JR59 1369 aa22.01■■□□□ 1.11
CNOT1-215ENST00000569020 CCNB3Q8WWL7 1395 aa22■■□□□ 1.11
CNOT1-215ENST00000569020 PLEKHH2Q8IVE3 1493 aa21.99■■□□□ 1.11
CNOT1-215ENST00000569020 CFDP1Q9UEE9 299 aaPredicted RBP21.99■■□□□ 1.11
CNOT1-215ENST00000569020 UHRF1BP1Q6BDS2 1440 aa21.98■■□□□ 1.11
CNOT1-215ENST00000569020 HNRNPMP52272 730 aaKnown RBP eCLIP21.97■■□□□ 1.11
CNOT1-215ENST00000569020 SPAG9O60271 1321 aaKnown RBP21.97■■□□□ 1.11
CNOT1-215ENST00000569020 SUPT6HQ7KZ85 1726 aaKnown RBP21.97■■□□□ 1.11
CNOT1-215ENST00000569020 KIAA1107Q9UPP5 1409 aa21.97■■□□□ 1.11
CNOT1-215ENST00000569020 ATP7AQ04656 1500 aa21.96■■□□□ 1.11
CNOT1-215ENST00000569020 EHBP1L1Q8N3D4 1523 aa21.96■■□□□ 1.11
CNOT1-215ENST00000569020 CNTLNQ9NXG0 1405 aa21.95■■□□□ 1.1
CNOT1-215ENST00000569020 CEP162Q5TB80 1403 aa21.93■■□□□ 1.1
CNOT1-215ENST00000569020 STRCQ7RTU9 1775 aa21.93■■□□□ 1.1
CNOT1-215ENST00000569020 INO80Q9ULG1 1556 aaPredicted RBP21.93■■□□□ 1.1
CNOT1-215ENST00000569020 MROH2AA6NES4 1674 aa21.92■■□□□ 1.1
CNOT1-215ENST00000569020 TIAM1Q13009 1591 aa21.92■■□□□ 1.1
CNOT1-215ENST00000569020 DMRT2Q9Y5R5 561 aa21.9■■□□□ 1.1
CNOT1-215ENST00000569020 ADGBQ8N7X0 1667 aa21.88■■□□□ 1.09
CNOT1-215ENST00000569020 PLXNC1O60486 1568 aa21.87■■□□□ 1.09
CNOT1-215ENST00000569020 CERKQ8TCT0 537 aa21.87■■□□□ 1.09
CNOT1-215ENST00000569020 A2MP01023 1474 aa21.87■■□□□ 1.09
CNOT1-215ENST00000569020 CLTCQ00610 1675 aaKnown RBP21.86■■□□□ 1.09
CNOT1-215ENST00000569020 ZMYM3Q14202 1370 aa21.83■■□□□ 1.08
CNOT1-215ENST00000569020 ZNF644Q9H582 1327 aaPredicted RBP21.82■■□□□ 1.08
CNOT1-215ENST00000569020 NPATQ14207 1427 aa21.81■■□□□ 1.08
CNOT1-215ENST00000569020 MBD5Q9P267 1494 aa21.81■■□□□ 1.08
CNOT1-215ENST00000569020 NCOA2Q15596 1464 aa21.79■■□□□ 1.08
CNOT1-215ENST00000569020 GGT6Q6P531 493 aa21.79■■□□□ 1.08
CNOT1-215ENST00000569020 RTEL1-TNFRSF6BF6WH68 1400 aa21.79■■□□□ 1.08
CNOT1-215ENST00000569020 PTPRTO14522 1441 aa21.78■■□□□ 1.08
CNOT1-215ENST00000569020 CAMSAP2Q08AD1 1489 aa21.76■■□□□ 1.07
CNOT1-215ENST00000569020 PPP6R1Q9UPN7 881 aa21.75■■□□□ 1.07
CNOT1-215ENST00000569020 NCOA1Q15788 1441 aa21.74■■□□□ 1.07
CNOT1-215ENST00000569020 CAMSAP1Q5T5Y3 1602 aa21.74■■□□□ 1.07
CNOT1-215ENST00000569020 MYO3AQ8NEV4 1616 aa21.74■■□□□ 1.07
CNOT1-215ENST00000569020 CCDC141Q6ZP82 1450 aa21.74■■□□□ 1.07
CNOT1-215ENST00000569020 ZNF142P52746 1687 aaPredicted RBP21.74■■□□□ 1.07
CNOT1-215ENST00000569020 RSPH4AQ5TD94 716 aa21.73■■□□□ 1.07
CNOT1-215ENST00000569020 VPS8Q8N3P4 1428 aa21.72■■□□□ 1.07
CNOT1-215ENST00000569020 DHX29Q7Z478 1369 aaKnown RBP21.72■■□□□ 1.07
CNOT1-215ENST00000569020 PTPRKQ15262 1439 aa21.71■■□□□ 1.07
CNOT1-215ENST00000569020 LOC105371045A0A1W2PR82 267 aa21.69■■□□□ 1.06
CNOT1-215ENST00000569020 ARHGEF5Q12774 1597 aa21.69■■□□□ 1.06
CNOT1-215ENST00000569020 CEP170BQ9Y4F5 1589 aaPredicted RBP21.69■■□□□ 1.06
CNOT1-215ENST00000569020 LRRC9Q6ZRR7 1453 aa21.68■■□□□ 1.06
CNOT1-215ENST00000569020 KIF3BO15066 747 aa21.65■■□□□ 1.06
CNOT1-215ENST00000569020 PLA2R1Q13018 1463 aa21.64■■□□□ 1.06
CNOT1-215ENST00000569020 TSPY4P0CV99 314 aa21.64■■□□□ 1.05
CNOT1-215ENST00000569020 TSPY10P0CW01 314 aa21.64■■□□□ 1.05
CNOT1-215ENST00000569020 LTBP4Q8N2S1 1624 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms