RNA–Protein interactions for RNA: ENST00000569005.5

EIF3C-213, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

TSL 5

Gene EIF3C, Length 610 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-213ENST00000569005 ATP1B4Q9UN42 357 aaPredicted RBP17.59■□□□□ 0.41
EIF3C-213ENST00000569005 MYO5CQ9NQX4 1742 aa17.58■□□□□ 0.41
EIF3C-213ENST00000569005 MAGI2Q86UL8 1455 aa17.58■□□□□ 0.41
EIF3C-213ENST00000569005 TROQ12816 1431 aaPredicted RBP17.58■□□□□ 0.41
EIF3C-213ENST00000569005 SCAPERQ9BY12 1400 aa17.58■□□□□ 0.41
EIF3C-213ENST00000569005 MLECQ14165 292 aa17.56■□□□□ 0.4
EIF3C-213ENST00000569005 PCF11O94913 1555 aaKnown RBP17.55■□□□□ 0.4
EIF3C-213ENST00000569005 HSPA2P54652 639 aa17.55■□□□□ 0.4
EIF3C-213ENST00000569005 FBXO41Q8TF61 875 aa17.54■□□□□ 0.4
EIF3C-213ENST00000569005 CDK11AQ9UQ88 783 aaPredicted RBP17.54■□□□□ 0.4
EIF3C-213ENST00000569005 RIMS1Q86UR5 1692 aaKnown RBP17.54■□□□□ 0.4
EIF3C-213ENST00000569005 CASKIN1Q8WXD9 1431 aa17.54■□□□□ 0.4
EIF3C-213ENST00000569005 LMTK3Q96Q04 1460 aa17.52■□□□□ 0.4
EIF3C-213ENST00000569005 EFCAB2Q5VUJ9 269 aa17.52■□□□□ 0.4
EIF3C-213ENST00000569005 KDM5CP41229 1560 aa17.5■□□□□ 0.39
EIF3C-213ENST00000569005 CLIP1P30622 1438 aa17.5■□□□□ 0.39
EIF3C-213ENST00000569005 CDC42BPBQ9Y5S2 1711 aa17.5■□□□□ 0.39
EIF3C-213ENST00000569005 ARHGAP5Q13017 1502 aa17.49■□□□□ 0.39
EIF3C-213ENST00000569005 CCDC18Q5T9S5 1454 aa17.49■□□□□ 0.39
EIF3C-213ENST00000569005 ATP10AO60312 1499 aa17.48■□□□□ 0.39
EIF3C-213ENST00000569005 ZNF518AQ6AHZ1 1483 aa17.48■□□□□ 0.39
EIF3C-213ENST00000569005 FYCO1Q9BQS8 1478 aa17.47■□□□□ 0.39
EIF3C-213ENST00000569005 PREX2Q70Z35 1606 aa17.47■□□□□ 0.39
EIF3C-213ENST00000569005 ARHGEF12Q9NZN5 1544 aa17.46■□□□□ 0.39
EIF3C-213ENST00000569005 C9orf84Q5VXU9 1444 aa17.46■□□□□ 0.39
EIF3C-213ENST00000569005 FER1L4A9Z1Z3 1794 aa17.44■□□□□ 0.38
EIF3C-213ENST00000569005 CEBPAP49715 358 aaPredicted RBP17.44■□□□□ 0.38
EIF3C-213ENST00000569005 AFAP1Q8N556 730 aa17.44■□□□□ 0.38
EIF3C-213ENST00000569005 ABCC1P33527 1531 aa17.43■□□□□ 0.38
EIF3C-213ENST00000569005 DIP2CQ9Y2E4 1556 aa17.43■□□□□ 0.38
EIF3C-213ENST00000569005 CDC42BPAQ5VT25 1732 aa17.41■□□□□ 0.38
EIF3C-213ENST00000569005 REREQ9P2R6 1566 aa17.41■□□□□ 0.38
EIF3C-213ENST00000569005 TRAPPC8Q9Y2L5 1435 aa17.41■□□□□ 0.38
EIF3C-213ENST00000569005 MLH3Q9UHC1 1453 aa17.41■□□□□ 0.38
EIF3C-213ENST00000569005 ABCA6Q8N139 1617 aa17.4■□□□□ 0.38
EIF3C-213ENST00000569005 ITSN2Q9NZM3 1697 aa17.4■□□□□ 0.38
EIF3C-213ENST00000569005 MYT1LQ9UL68 1186 aa17.36■□□□□ 0.37
EIF3C-213ENST00000569005 GPATCH8Q9UKJ3 1502 aaKnown RBP17.36■□□□□ 0.37
EIF3C-213ENST00000569005 KIDINS220Q9ULH0 1771 aa17.35■□□□□ 0.37
EIF3C-213ENST00000569005 SAMD9LQ8IVG5 1584 aa17.35■□□□□ 0.37
EIF3C-213ENST00000569005 AGLP35573 1532 aa17.34■□□□□ 0.37
EIF3C-213ENST00000569005 CERKQ8TCT0 537 aa17.33■□□□□ 0.36
EIF3C-213ENST00000569005 SYCP2Q9BX26 1530 aa17.31■□□□□ 0.36
EIF3C-213ENST00000569005 PREX1Q8TCU6 1659 aa17.3■□□□□ 0.36
EIF3C-213ENST00000569005 KIAA1107Q9UPP5 1409 aa17.27■□□□□ 0.35
EIF3C-213ENST00000569005 C3P01024 1663 aa17.26■□□□□ 0.35
EIF3C-213ENST00000569005 INO80Q9ULG1 1556 aaPredicted RBP17.25■□□□□ 0.35
EIF3C-213ENST00000569005 CEP162Q5TB80 1403 aa17.25■□□□□ 0.35
EIF3C-213ENST00000569005 ZNF777Q9ULD5 760 aaPredicted RBP17.25■□□□□ 0.35
EIF3C-213ENST00000569005 SETD1BQ9UPS6 1966 aaKnown RBP17.24■□□□□ 0.35
EIF3C-213ENST00000569005 TIAM1Q13009 1591 aa17.23■□□□□ 0.35
EIF3C-213ENST00000569005 ATP7AQ04656 1500 aa17.23■□□□□ 0.35
EIF3C-213ENST00000569005 HNRNPMP52272 730 aaKnown RBP eCLIP17.23■□□□□ 0.35
EIF3C-213ENST00000569005 MTUS2Q5JR59 1369 aa17.23■□□□□ 0.35
EIF3C-213ENST00000569005 CCNB3Q8WWL7 1395 aa17.23■□□□□ 0.35
EIF3C-213ENST00000569005 PLEKHH2Q8IVE3 1493 aa17.23■□□□□ 0.35
EIF3C-213ENST00000569005 PLXNC1O60486 1568 aa17.23■□□□□ 0.35
EIF3C-213ENST00000569005 STRCQ7RTU9 1775 aa17.23■□□□□ 0.35
EIF3C-213ENST00000569005 EHBP1L1Q8N3D4 1523 aa17.22■□□□□ 0.35
EIF3C-213ENST00000569005 CFDP1Q9UEE9 299 aaPredicted RBP17.22■□□□□ 0.35
EIF3C-213ENST00000569005 SPAG9O60271 1321 aaKnown RBP17.21■□□□□ 0.35
EIF3C-213ENST00000569005 UHRF1BP1Q6BDS2 1440 aa17.21■□□□□ 0.34
EIF3C-213ENST00000569005 MBD5Q9P267 1494 aa17.19■□□□□ 0.34
EIF3C-213ENST00000569005 CNTLNQ9NXG0 1405 aa17.19■□□□□ 0.34
EIF3C-213ENST00000569005 ZNF644Q9H582 1327 aaPredicted RBP17.19■□□□□ 0.34
EIF3C-213ENST00000569005 MROH2AA6NES4 1674 aa17.18■□□□□ 0.34
EIF3C-213ENST00000569005 ESF1Q9H501 851 aaKnown RBP17.18■□□□□ 0.34
EIF3C-213ENST00000569005 SUPT6HQ7KZ85 1726 aaKnown RBP17.18■□□□□ 0.34
EIF3C-213ENST00000569005 A2MP01023 1474 aa17.17■□□□□ 0.34
EIF3C-213ENST00000569005 DMRT2Q9Y5R5 561 aa17.16■□□□□ 0.34
EIF3C-213ENST00000569005 ADGBQ8N7X0 1667 aa17.13■□□□□ 0.33
EIF3C-213ENST00000569005 NPATQ14207 1427 aa17.13■□□□□ 0.33
EIF3C-213ENST00000569005 NCOA2Q15596 1464 aa17.12■□□□□ 0.33
EIF3C-213ENST00000569005 ZMYM3Q14202 1370 aa17.12■□□□□ 0.33
EIF3C-213ENST00000569005 CLTCQ00610 1675 aaKnown RBP17.11■□□□□ 0.33
EIF3C-213ENST00000569005 RTEL1-TNFRSF6BF6WH68 1400 aa17.11■□□□□ 0.33
EIF3C-213ENST00000569005 NCOA1Q15788 1441 aa17.1■□□□□ 0.33
EIF3C-213ENST00000569005 NCKAP5LQ9HCH0 1330 aa17.09■□□□□ 0.33
EIF3C-213ENST00000569005 PTPRTO14522 1441 aa17.09■□□□□ 0.33
EIF3C-213ENST00000569005 CAMSAP2Q08AD1 1489 aa17.09■□□□□ 0.33
EIF3C-213ENST00000569005 PTPRKQ15262 1439 aa17.08■□□□□ 0.32
EIF3C-213ENST00000569005 ILDR2Q71H61 639 aa17.08■□□□□ 0.32
EIF3C-213ENST00000569005 VPS8Q8N3P4 1428 aa17.07■□□□□ 0.32
EIF3C-213ENST00000569005 GGT6Q6P531 493 aa17.07■□□□□ 0.32
EIF3C-213ENST00000569005 CCDC141Q6ZP82 1450 aa17.06■□□□□ 0.32
EIF3C-213ENST00000569005 LOC105371045A0A1W2PR82 267 aa17.06■□□□□ 0.32
EIF3C-213ENST00000569005 ZNF142P52746 1687 aaPredicted RBP17.06■□□□□ 0.32
EIF3C-213ENST00000569005 DHX29Q7Z478 1369 aaKnown RBP17.05■□□□□ 0.32
EIF3C-213ENST00000569005 MYO3AQ8NEV4 1616 aa17.05■□□□□ 0.32
EIF3C-213ENST00000569005 LRRC9Q6ZRR7 1453 aa17.05■□□□□ 0.32
EIF3C-213ENST00000569005 CAMSAP1Q5T5Y3 1602 aa17.04■□□□□ 0.32
EIF3C-213ENST00000569005 LTBP4Q8N2S1 1624 aa17.03■□□□□ 0.32
EIF3C-213ENST00000569005 DISP3Q9P2K9 1392 aa17.03■□□□□ 0.32
EIF3C-213ENST00000569005 ARHGEF5Q12774 1597 aa17.03■□□□□ 0.32
EIF3C-213ENST00000569005 PPP6R1Q9UPN7 881 aa17.03■□□□□ 0.32
EIF3C-213ENST00000569005 CEP170BQ9Y4F5 1589 aaPredicted RBP17.01■□□□□ 0.31
EIF3C-213ENST00000569005 MAP3K1Q13233 1512 aa17.01■□□□□ 0.31
EIF3C-213ENST00000569005 PLA2R1Q13018 1463 aa16.99■□□□□ 0.31
EIF3C-213ENST00000569005 ZNF335Q9H4Z2 1342 aaPredicted RBP16.99■□□□□ 0.31
EIF3C-213ENST00000569005 RSPH4AQ5TD94 716 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms