RNA–Protein interactions for RNA: ENST00000568903.5

TNRC6A-215, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 943 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-215ENST00000568903 TTC37Q6PGP7 1564 aa16.26■□□□□ 0.19
TNRC6A-215ENST00000568903 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
TNRC6A-215ENST00000568903 AKNAQ7Z591 1439 aa16.26■□□□□ 0.19
TNRC6A-215ENST00000568903 ARID4BQ4LE39 1312 aaPredicted RBP16.24■□□□□ 0.19
TNRC6A-215ENST00000568903 ARHGAP35Q9NRY4 1499 aa16.24■□□□□ 0.19
TNRC6A-215ENST00000568903 FANCAO15360 1455 aa16.23■□□□□ 0.19
TNRC6A-215ENST00000568903 ADAMTSL3P82987 1691 aa16.23■□□□□ 0.19
TNRC6A-215ENST00000568903 DENND4BO75064 1496 aaPredicted RBP16.22■□□□□ 0.19
TNRC6A-215ENST00000568903 PTPRMP28827 1452 aa16.22■□□□□ 0.19
TNRC6A-215ENST00000568903 RICTORQ6R327 1708 aa16.2■□□□□ 0.18
TNRC6A-215ENST00000568903 YEATS2Q9ULM3 1422 aa16.19■□□□□ 0.18
TNRC6A-215ENST00000568903 SIGLEC1Q9BZZ2 1709 aa16.19■□□□□ 0.18
TNRC6A-215ENST00000568903 DCAF8L1A6NGE4 600 aa16.18■□□□□ 0.18
TNRC6A-215ENST00000568903 BCORL1Q5H9F3 1711 aa16.18■□□□□ 0.18
TNRC6A-215ENST00000568903 MADDQ8WXG6 1647 aa16.18■□□□□ 0.18
TNRC6A-215ENST00000568903 PLCH2O75038 1416 aa16.17■□□□□ 0.18
TNRC6A-215ENST00000568903 ARHGEF40Q8TER5 1519 aa16.16■□□□□ 0.18
TNRC6A-215ENST00000568903 SCAPERQ9BY12 1400 aa16.16■□□□□ 0.18
TNRC6A-215ENST00000568903 ATXN8OSP0DMR3 200 aa16.15■□□□□ 0.18
TNRC6A-215ENST00000568903 MLECQ14165 292 aa16.15■□□□□ 0.18
TNRC6A-215ENST00000568903 FMN1Q68DA7 1419 aa16.15■□□□□ 0.18
TNRC6A-215ENST00000568903 KIF14Q15058 1648 aa16.15■□□□□ 0.18
TNRC6A-215ENST00000568903 LRRIQ1Q96JM4 1722 aa16.14■□□□□ 0.17
TNRC6A-215ENST00000568903 HECW1Q76N89 1606 aa16.13■□□□□ 0.17
TNRC6A-215ENST00000568903 CFAP74Q9C0B2 1584 aa16.12■□□□□ 0.17
TNRC6A-215ENST00000568903 ZMYM4Q5VZL5 1548 aa16.11■□□□□ 0.17
TNRC6A-215ENST00000568903 ZFYVE16Q7Z3T8 1539 aa16.11■□□□□ 0.17
TNRC6A-215ENST00000568903 RIMS1Q86UR5 1692 aaKnown RBP16.11■□□□□ 0.17
TNRC6A-215ENST00000568903 POGZQ7Z3K3 1410 aa16.11■□□□□ 0.17
TNRC6A-215ENST00000568903 EFCAB2Q5VUJ9 269 aa16.1■□□□□ 0.17
TNRC6A-215ENST00000568903 HSPA2P54652 639 aa16.09■□□□□ 0.17
TNRC6A-215ENST00000568903 AFAP1Q8N556 730 aa16.09■□□□□ 0.17
TNRC6A-215ENST00000568903 TROQ12816 1431 aaPredicted RBP16.09■□□□□ 0.17
TNRC6A-215ENST00000568903 CDK11AQ9UQ88 783 aaPredicted RBP16.08■□□□□ 0.16
TNRC6A-215ENST00000568903 LMTK3Q96Q04 1460 aa16.08■□□□□ 0.16
TNRC6A-215ENST00000568903 MYO5CQ9NQX4 1742 aa16.06■□□□□ 0.16
TNRC6A-215ENST00000568903 PCF11O94913 1555 aaKnown RBP16.05■□□□□ 0.16
TNRC6A-215ENST00000568903 MAGI2Q86UL8 1455 aa16.05■□□□□ 0.16
TNRC6A-215ENST00000568903 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.05■□□□□ 0.169e-7■■□□□ 13.7
TNRC6A-215ENST00000568903 ARHGAP5Q13017 1502 aa16.04■□□□□ 0.16
TNRC6A-215ENST00000568903 ATP10AO60312 1499 aa16.03■□□□□ 0.16
TNRC6A-215ENST00000568903 CEBPAP49715 358 aaPredicted RBP16.03■□□□□ 0.16
TNRC6A-215ENST00000568903 CASKIN1Q8WXD9 1431 aa16.02■□□□□ 0.16
TNRC6A-215ENST00000568903 ARHGEF12Q9NZN5 1544 aa16.02■□□□□ 0.15
TNRC6A-215ENST00000568903 CLIP1P30622 1438 aa16.01■□□□□ 0.15
TNRC6A-215ENST00000568903 CDC42BPBQ9Y5S2 1711 aa16■□□□□ 0.15
TNRC6A-215ENST00000568903 MYT1LQ9UL68 1186 aa16■□□□□ 0.15
TNRC6A-215ENST00000568903 TRAPPC8Q9Y2L5 1435 aa16■□□□□ 0.15
TNRC6A-215ENST00000568903 C9orf84Q5VXU9 1444 aa15.99■□□□□ 0.15
TNRC6A-215ENST00000568903 FER1L4A9Z1Z3 1794 aa15.98■□□□□ 0.15
TNRC6A-215ENST00000568903 ZNF518AQ6AHZ1 1483 aa15.97■□□□□ 0.15
TNRC6A-215ENST00000568903 KDM5CP41229 1560 aa15.96■□□□□ 0.15
TNRC6A-215ENST00000568903 FBXO41Q8TF61 875 aa15.95■□□□□ 0.14
TNRC6A-215ENST00000568903 ZNF777Q9ULD5 760 aaPredicted RBP15.95■□□□□ 0.14
TNRC6A-215ENST00000568903 DIP2CQ9Y2E4 1556 aa15.95■□□□□ 0.14
TNRC6A-215ENST00000568903 CCDC18Q5T9S5 1454 aa15.94■□□□□ 0.14
TNRC6A-215ENST00000568903 PREX2Q70Z35 1606 aa15.94■□□□□ 0.14
TNRC6A-215ENST00000568903 ABCA6Q8N139 1617 aa15.93■□□□□ 0.14
TNRC6A-215ENST00000568903 ABCC1P33527 1531 aa15.93■□□□□ 0.14
TNRC6A-215ENST00000568903 FYCO1Q9BQS8 1478 aa15.91■□□□□ 0.14
TNRC6A-215ENST00000568903 MLH3Q9UHC1 1453 aa15.91■□□□□ 0.14
TNRC6A-215ENST00000568903 CDC42BPAQ5VT25 1732 aa15.91■□□□□ 0.14
TNRC6A-215ENST00000568903 HNRNPMP52272 730 aaKnown RBP eCLIP15.91■□□□□ 0.14
TNRC6A-215ENST00000568903 GPATCH8Q9UKJ3 1502 aaKnown RBP15.9■□□□□ 0.14
TNRC6A-215ENST00000568903 ITSN2Q9NZM3 1697 aa15.89■□□□□ 0.13
TNRC6A-215ENST00000568903 SAMD9LQ8IVG5 1584 aa15.88■□□□□ 0.13
TNRC6A-215ENST00000568903 KIDINS220Q9ULH0 1771 aa15.87■□□□□ 0.13
TNRC6A-215ENST00000568903 SAMD1Q6SPF0 538 aaPredicted RBP15.87■□□□□ 0.13
TNRC6A-215ENST00000568903 ZNF644Q9H582 1327 aaPredicted RBP15.86■□□□□ 0.13
TNRC6A-215ENST00000568903 SYCP2Q9BX26 1530 aa15.85■□□□□ 0.13
TNRC6A-215ENST00000568903 REREQ9P2R6 1566 aa15.85■□□□□ 0.13
TNRC6A-215ENST00000568903 CFDP1Q9UEE9 299 aaPredicted RBP15.84■□□□□ 0.13
TNRC6A-215ENST00000568903 U3KPZ7 1027 aaPredicted RBP15.83■□□□□ 0.12
TNRC6A-215ENST00000568903 AGLP35573 1532 aa15.83■□□□□ 0.12
TNRC6A-215ENST00000568903 PREX1Q8TCU6 1659 aa15.83■□□□□ 0.12
TNRC6A-215ENST00000568903 CERKQ8TCT0 537 aa15.82■□□□□ 0.12
TNRC6A-215ENST00000568903 SPAG9O60271 1321 aaKnown RBP15.82■□□□□ 0.12
TNRC6A-215ENST00000568903 C3P01024 1663 aa15.82■□□□□ 0.12
TNRC6A-215ENST00000568903 STRCQ7RTU9 1775 aa15.81■□□□□ 0.12
TNRC6A-215ENST00000568903 CCNB3Q8WWL7 1395 aa15.81■□□□□ 0.12
TNRC6A-215ENST00000568903 MTUS2Q5JR59 1369 aa15.8■□□□□ 0.12
TNRC6A-215ENST00000568903 UHRF1BP1Q6BDS2 1440 aa15.79■□□□□ 0.12
TNRC6A-215ENST00000568903 ESF1Q9H501 851 aaKnown RBP15.79■□□□□ 0.12
TNRC6A-215ENST00000568903 LOC105371045A0A1W2PR82 267 aa15.78■□□□□ 0.12
TNRC6A-215ENST00000568903 CEP162Q5TB80 1403 aa15.77■□□□□ 0.12
TNRC6A-215ENST00000568903 SUPT6HQ7KZ85 1726 aaKnown RBP15.77■□□□□ 0.12
TNRC6A-215ENST00000568903 KIAA1107Q9UPP5 1409 aa15.77■□□□□ 0.11
TNRC6A-215ENST00000568903 ATP7AQ04656 1500 aa15.76■□□□□ 0.11
TNRC6A-215ENST00000568903 ZMYM3Q14202 1370 aa15.75■□□□□ 0.11
TNRC6A-215ENST00000568903 TIAM1Q13009 1591 aa15.75■□□□□ 0.11
TNRC6A-215ENST00000568903 GGT6Q6P531 493 aa15.74■□□□□ 0.11
TNRC6A-215ENST00000568903 INO80Q9ULG1 1556 aaPredicted RBP15.74■□□□□ 0.11
TNRC6A-215ENST00000568903 SETD1BQ9UPS6 1966 aaKnown RBP15.73■□□□□ 0.11
TNRC6A-215ENST00000568903 A2MP01023 1474 aa15.73■□□□□ 0.11
TNRC6A-215ENST00000568903 MBD5Q9P267 1494 aa15.73■□□□□ 0.11
TNRC6A-215ENST00000568903 PLEKHH2Q8IVE3 1493 aa15.71■□□□□ 0.11
TNRC6A-215ENST00000568903 PLXNC1O60486 1568 aa15.71■□□□□ 0.11
TNRC6A-215ENST00000568903 CNTLNQ9NXG0 1405 aa15.71■□□□□ 0.11
TNRC6A-215ENST00000568903 CLTCQ00610 1675 aaKnown RBP15.7■□□□□ 0.1
TNRC6A-215ENST00000568903 EHBP1L1Q8N3D4 1523 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms