RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 MYT1LQ9UL68 1186 aa16.49■□□□□ 0.23
UBR1-207ENST00000568782 MTUS2Q5JR59 1369 aa16.47■□□□□ 0.23
UBR1-207ENST00000568782 FRMPD1Q5SYB0 1578 aa16.45■□□□□ 0.22
UBR1-207ENST00000568782 CDC42BPBQ9Y5S2 1711 aa16.45■□□□□ 0.22
UBR1-207ENST00000568782 MAGI2Q86UL8 1455 aa16.44■□□□□ 0.22
UBR1-207ENST00000568782 PREX2Q70Z35 1606 aa16.43■□□□□ 0.22
UBR1-207ENST00000568782 ZFYVE16Q7Z3T8 1539 aa16.42■□□□□ 0.22
UBR1-207ENST00000568782 POGZQ7Z3K3 1410 aa16.42■□□□□ 0.22
UBR1-207ENST00000568782 CDC42BPAQ5VT25 1732 aa16.42■□□□□ 0.22
UBR1-207ENST00000568782 ZNF518AQ6AHZ1 1483 aa16.42■□□□□ 0.22
UBR1-207ENST00000568782 ZMYM4Q5VZL5 1548 aa16.41■□□□□ 0.22
UBR1-207ENST00000568782 ARHGEF40Q8TER5 1519 aa16.41■□□□□ 0.22
UBR1-207ENST00000568782 ZNF777Q9ULD5 760 aaPredicted RBP16.41■□□□□ 0.22
UBR1-207ENST00000568782 CCNB3Q8WWL7 1395 aa16.4■□□□□ 0.22
UBR1-207ENST00000568782 CFDP1Q9UEE9 299 aaPredicted RBP16.38■□□□□ 0.21
UBR1-207ENST00000568782 EHBP1L1Q8N3D4 1523 aa16.37■□□□□ 0.21
UBR1-207ENST00000568782 APLP2Q06481 763 aa16.37■□□□□ 0.21
UBR1-207ENST00000568782 AFAP1Q8N556 730 aa16.36■□□□□ 0.21
UBR1-207ENST00000568782 BCORL1Q5H9F3 1711 aa16.36■□□□□ 0.21
UBR1-207ENST00000568782 VPS8Q8N3P4 1428 aa16.36■□□□□ 0.21
UBR1-207ENST00000568782 ATP10AO60312 1499 aa16.35■□□□□ 0.21
UBR1-207ENST00000568782 ITSN2Q9NZM3 1697 aa16.34■□□□□ 0.21
UBR1-207ENST00000568782 YEATS2Q9ULM3 1422 aa16.34■□□□□ 0.21
UBR1-207ENST00000568782 ADAMTSL3P82987 1691 aa16.34■□□□□ 0.21
UBR1-207ENST00000568782 PLEKHH2Q8IVE3 1493 aa16.33■□□□□ 0.2
UBR1-207ENST00000568782 ABCC1P33527 1531 aa16.33■□□□□ 0.2
UBR1-207ENST00000568782 GPATCH8Q9UKJ3 1502 aaKnown RBP16.33■□□□□ 0.2
UBR1-207ENST00000568782 HECW2Q9P2P5 1572 aa16.33■□□□□ 0.2
UBR1-207ENST00000568782 SUPT6HQ7KZ85 1726 aaKnown RBP16.33■□□□□ 0.2
UBR1-207ENST00000568782 MLECQ14165 292 aa16.32■□□□□ 0.2
UBR1-207ENST00000568782 C9orf84Q5VXU9 1444 aa16.32■□□□□ 0.2
UBR1-207ENST00000568782 KDM5CP41229 1560 aa16.31■□□□□ 0.2
UBR1-207ENST00000568782 TIAM1Q13009 1591 aa16.3■□□□□ 0.2
UBR1-207ENST00000568782 HNRNPMP52272 730 aaKnown RBP eCLIP16.29■□□□□ 0.2
UBR1-207ENST00000568782 ESF1Q9H501 851 aaKnown RBP16.29■□□□□ 0.2
UBR1-207ENST00000568782 MLH3Q9UHC1 1453 aa16.29■□□□□ 0.2
UBR1-207ENST00000568782 MADDQ8WXG6 1647 aa16.28■□□□□ 0.2
UBR1-207ENST00000568782 SAMD9LQ8IVG5 1584 aa16.28■□□□□ 0.2
UBR1-207ENST00000568782 PTPRMP28827 1452 aa16.28■□□□□ 0.2
UBR1-207ENST00000568782 TRAPPC8Q9Y2L5 1435 aa16.28■□□□□ 0.2
UBR1-207ENST00000568782 RIMS1Q86UR5 1692 aaKnown RBP16.27■□□□□ 0.2
UBR1-207ENST00000568782 SPAG9O60271 1321 aaKnown RBP16.27■□□□□ 0.2
UBR1-207ENST00000568782 SYCP2Q9BX26 1530 aa16.27■□□□□ 0.2
UBR1-207ENST00000568782 KIAA1107Q9UPP5 1409 aa16.27■□□□□ 0.19
UBR1-207ENST00000568782 FER1L4A9Z1Z3 1794 aa16.26■□□□□ 0.19
UBR1-207ENST00000568782 PLPPR3Q6T4P5 718 aa16.26■□□□□ 0.19
UBR1-207ENST00000568782 ARHGEF12Q9NZN5 1544 aa16.25■□□□□ 0.19
UBR1-207ENST00000568782 NCOA2Q15596 1464 aa16.24■□□□□ 0.19
UBR1-207ENST00000568782 MAP3K1Q13233 1512 aa16.24■□□□□ 0.19
UBR1-207ENST00000568782 DIP2CQ9Y2E4 1556 aa16.23■□□□□ 0.19
UBR1-207ENST00000568782 RSPH4AQ5TD94 716 aa16.23■□□□□ 0.19
UBR1-207ENST00000568782 KIDINS220Q9ULH0 1771 aa16.23■□□□□ 0.19
UBR1-207ENST00000568782 LRRC9Q6ZRR7 1453 aa16.22■□□□□ 0.19
UBR1-207ENST00000568782 ABCA6Q8N139 1617 aa16.22■□□□□ 0.19
UBR1-207ENST00000568782 REREQ9P2R6 1566 aa16.21■□□□□ 0.19
UBR1-207ENST00000568782 SIGLEC1Q9BZZ2 1709 aa16.2■□□□□ 0.18
UBR1-207ENST00000568782 TSPY4P0CV99 314 aa16.19■□□□□ 0.18
UBR1-207ENST00000568782 TSPY10P0CW01 314 aa16.19■□□□□ 0.18
UBR1-207ENST00000568782 ATP7AQ04656 1500 aa16.19■□□□□ 0.18
UBR1-207ENST00000568782 ZNF644Q9H582 1327 aaPredicted RBP16.19■□□□□ 0.18
UBR1-207ENST00000568782 AGLP35573 1532 aa16.17■□□□□ 0.18
UBR1-207ENST00000568782 ADGBQ8N7X0 1667 aa16.16■□□□□ 0.18
UBR1-207ENST00000568782 KANK4Q5T7N3 995 aaPredicted RBP16.16■□□□□ 0.18
UBR1-207ENST00000568782 SETD1BQ9UPS6 1966 aaKnown RBP16.15■□□□□ 0.18
UBR1-207ENST00000568782 CAMSAP2Q08AD1 1489 aa16.15■□□□□ 0.18
UBR1-207ENST00000568782 INO80Q9ULG1 1556 aaPredicted RBP16.14■□□□□ 0.17
UBR1-207ENST00000568782 CCDC141Q6ZP82 1450 aa16.14■□□□□ 0.17
UBR1-207ENST00000568782 RTEL1-TNFRSF6BF6WH68 1400 aa16.13■□□□□ 0.17
UBR1-207ENST00000568782 A2MP01023 1474 aa16.13■□□□□ 0.17
UBR1-207ENST00000568782 MBD5Q9P267 1494 aa16.12■□□□□ 0.17
UBR1-207ENST00000568782 MYOM3Q5VTT5 1437 aa16.11■□□□□ 0.17
UBR1-207ENST00000568782 MIA2Q96PC5 1412 aa16.11■□□□□ 0.17
UBR1-207ENST00000568782 CNTLNQ9NXG0 1405 aa16.11■□□□□ 0.17
UBR1-207ENST00000568782 GGT6Q6P531 493 aa16.1■□□□□ 0.17
UBR1-207ENST00000568782 CEBPAP49715 358 aaPredicted RBP16.09■□□□□ 0.17
UBR1-207ENST00000568782 PPP6R1Q9UPN7 881 aa16.09■□□□□ 0.17
UBR1-207ENST00000568782 ARHGEF5Q12774 1597 aa16.09■□□□□ 0.17
UBR1-207ENST00000568782 PREX1Q8TCU6 1659 aa16.08■□□□□ 0.16
UBR1-207ENST00000568782 C3P01024 1663 aa16.06■□□□□ 0.16
UBR1-207ENST00000568782 DHX29Q7Z478 1369 aaKnown RBP16.06■□□□□ 0.16
UBR1-207ENST00000568782 PLXNC1O60486 1568 aa16.05■□□□□ 0.16
UBR1-207ENST00000568782 LMTK3Q96Q04 1460 aa16.05■□□□□ 0.16
UBR1-207ENST00000568782 KIF3BO15066 747 aa16.05■□□□□ 0.16
UBR1-207ENST00000568782 MROH2AA6NES4 1674 aa16.05■□□□□ 0.16
UBR1-207ENST00000568782 UHRF1BP1Q6BDS2 1440 aa16.04■□□□□ 0.16
UBR1-207ENST00000568782 CLTCQ00610 1675 aaKnown RBP16.02■□□□□ 0.16
UBR1-207ENST00000568782 PTPN23Q9H3S7 1636 aa16.02■□□□□ 0.16
UBR1-207ENST00000568782 HSPA2P54652 639 aa16.02■□□□□ 0.16
UBR1-207ENST00000568782 ZMYM3Q14202 1370 aa16.01■□□□□ 0.15
UBR1-207ENST00000568782 MAST1Q9Y2H9 1570 aa16■□□□□ 0.15
UBR1-207ENST00000568782 WASHC2CQ9Y4E1 1318 aa15.99■□□□□ 0.15
UBR1-207ENST00000568782 FGD6Q6ZV73 1430 aa15.98■□□□□ 0.15
UBR1-207ENST00000568782 DMRT2Q9Y5R5 561 aa15.98■□□□□ 0.15
UBR1-207ENST00000568782 NPATQ14207 1427 aa15.97■□□□□ 0.15
UBR1-207ENST00000568782 FAM50AQ14320 339 aaKnown RBP15.97■□□□□ 0.15
UBR1-207ENST00000568782 CROCC2H7BZ55 1655 aa15.95■□□□□ 0.14
UBR1-207ENST00000568782 FAM135AQ9P2D6 1515 aa15.94■□□□□ 0.14
UBR1-207ENST00000568782 DNMT1P26358 1616 aaKnown RBP15.94■□□□□ 0.14
UBR1-207ENST00000568782 DUOX2Q9NRD8 1548 aa15.94■□□□□ 0.14
UBR1-207ENST00000568782 SHANK2Q9UPX8 1470 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms