RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 PPRC1Q5VV67 1664 aaKnown RBP11.88□□□□□ -0.51
SCAPER-221ENST00000568549 CD109Q6YHK3 1445 aa11.88□□□□□ -0.51
SCAPER-221ENST00000568549 TRHP20396 242 aaPredicted RBP11.88□□□□□ -0.51
SCAPER-221ENST00000568549 GPATCH8Q9UKJ3 1502 aaKnown RBP11.87□□□□□ -0.51
SCAPER-221ENST00000568549 CFAP74Q9C0B2 1584 aa11.87□□□□□ -0.51
SCAPER-221ENST00000568549 ARHGAP5Q13017 1502 aa11.86□□□□□ -0.51
SCAPER-221ENST00000568549 ARAP3Q8WWN8 1544 aa11.86□□□□□ -0.51
SCAPER-221ENST00000568549 PHLDB1Q86UU1 1377 aa11.86□□□□□ -0.51
SCAPER-221ENST00000568549 PLCH2O75038 1416 aa11.86□□□□□ -0.51
SCAPER-221ENST00000568549 MYOM3Q5VTT5 1437 aa11.86□□□□□ -0.51
SCAPER-221ENST00000568549 TEX14Q8IWB6 1497 aa11.83□□□□□ -0.52
SCAPER-221ENST00000568549 FANCAO15360 1455 aa11.83□□□□□ -0.52
SCAPER-221ENST00000568549 PTPN23Q9H3S7 1636 aa11.82□□□□□ -0.52
SCAPER-221ENST00000568549 CFDP1Q9UEE9 299 aaPredicted RBP11.82□□□□□ -0.52
SCAPER-221ENST00000568549 FGD6Q6ZV73 1430 aa11.82□□□□□ -0.52
SCAPER-221ENST00000568549 MIA2Q96PC5 1412 aa11.82□□□□□ -0.52
SCAPER-221ENST00000568549 SAMD9LQ8IVG5 1584 aa11.82□□□□□ -0.52
SCAPER-221ENST00000568549 EFCAB2Q5VUJ9 269 aa11.8□□□□□ -0.52
SCAPER-221ENST00000568549 CAMSAP2Q08AD1 1489 aa11.8□□□□□ -0.52
SCAPER-221ENST00000568549 NEO1Q92859 1461 aa11.8□□□□□ -0.52
SCAPER-221ENST00000568549 ZNF777Q9ULD5 760 aaPredicted RBP11.79□□□□□ -0.52
SCAPER-221ENST00000568549 ABCC1P33527 1531 aa11.79□□□□□ -0.52
SCAPER-221ENST00000568549 AKNAQ7Z591 1439 aa11.78□□□□□ -0.52
SCAPER-221ENST00000568549 TCOF1Q13428 1488 aaKnown RBP11.78□□□□□ -0.52
SCAPER-221ENST00000568549 RRBP1Q9P2E9 1410 aaKnown RBP11.77□□□□□ -0.52
SCAPER-221ENST00000568549 ADGRL1O94910 1474 aa11.77□□□□□ -0.52
SCAPER-221ENST00000568549 PLEKHH2Q8IVE3 1493 aa11.77□□□□□ -0.52
SCAPER-221ENST00000568549 SYCP2Q9BX26 1530 aa11.77□□□□□ -0.52
SCAPER-221ENST00000568549 ZNF644Q9H582 1327 aaPredicted RBP11.76□□□□□ -0.53
SCAPER-221ENST00000568549 ARHGEF5Q12774 1597 aa11.75□□□□□ -0.53
SCAPER-221ENST00000568549 CROCC2H7BZ55 1655 aa11.75□□□□□ -0.53
SCAPER-221ENST00000568549 RICTORQ6R327 1708 aa11.74□□□□□ -0.53
SCAPER-221ENST00000568549 FAM50AQ14320 339 aaKnown RBP11.74□□□□□ -0.53
SCAPER-221ENST00000568549 SCAPERQ9BY12 1400 aa11.74□□□□□ -0.53
SCAPER-221ENST00000568549 KIAA1107Q9UPP5 1409 aa11.74□□□□□ -0.53
SCAPER-221ENST00000568549 ARHGEF12Q9NZN5 1544 aa11.74□□□□□ -0.53
SCAPER-221ENST00000568549 DNMT1P26358 1616 aaKnown RBP11.74□□□□□ -0.53
SCAPER-221ENST00000568549 KDM6BO15054 1643 aa11.73□□□□□ -0.53
SCAPER-221ENST00000568549 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.73□□□□□ -0.53
SCAPER-221ENST00000568549 DENND4BO75064 1496 aaPredicted RBP11.72□□□□□ -0.53
SCAPER-221ENST00000568549 HNRNPMP52272 730 aaKnown RBP eCLIP11.72□□□□□ -0.53
SCAPER-221ENST00000568549 FRMPD1Q5SYB0 1578 aa11.71□□□□□ -0.53
SCAPER-221ENST00000568549 CCDC141Q6ZP82 1450 aa11.71□□□□□ -0.53
SCAPER-221ENST00000568549 MBD5Q9P267 1494 aa11.71□□□□□ -0.53
SCAPER-221ENST00000568549 POGZQ7Z3K3 1410 aa11.71□□□□□ -0.53
SCAPER-221ENST00000568549 ZNF518AQ6AHZ1 1483 aa11.7□□□□□ -0.54
SCAPER-221ENST00000568549 TRAPPC8Q9Y2L5 1435 aa11.7□□□□□ -0.54
SCAPER-221ENST00000568549 ADGBQ8N7X0 1667 aa11.7□□□□□ -0.54
SCAPER-221ENST00000568549 KDM5CP41229 1560 aa11.7□□□□□ -0.54
SCAPER-221ENST00000568549 DAPK1P53355 1430 aa11.69□□□□□ -0.54
SCAPER-221ENST00000568549 HECW2Q9P2P5 1572 aa11.68□□□□□ -0.54
SCAPER-221ENST00000568549 MAST1Q9Y2H9 1570 aa11.68□□□□□ -0.54
SCAPER-221ENST00000568549 RSPH4AQ5TD94 716 aa11.68□□□□□ -0.54
SCAPER-221ENST00000568549 ZMYM4Q5VZL5 1548 aa11.68□□□□□ -0.54
SCAPER-221ENST00000568549 COL17A1Q9UMD9 1497 aaPredicted RBP11.68□□□□□ -0.54
SCAPER-221ENST00000568549 SHANK2Q9UPX8 1470 aa11.68□□□□□ -0.54
SCAPER-221ENST00000568549 ABCC5O15440 1437 aa11.68□□□□□ -0.54
SCAPER-221ENST00000568549 INO80Q9ULG1 1556 aaPredicted RBP11.67□□□□□ -0.54
SCAPER-221ENST00000568549 RAPGEF3O95398 923 aa11.67□□□□□ -0.54
SCAPER-221ENST00000568549 KIDINS220Q9ULH0 1771 aa11.67□□□□□ -0.54
SCAPER-221ENST00000568549 ZFYVE16Q7Z3T8 1539 aa11.66□□□□□ -0.54
SCAPER-221ENST00000568549 ITGAEP38570 1179 aa11.66□□□□□ -0.54
SCAPER-221ENST00000568549 AFAP1Q8N556 730 aa11.66□□□□□ -0.54
SCAPER-221ENST00000568549 ATP7AQ04656 1500 aa11.65□□□□□ -0.54
SCAPER-221ENST00000568549 TSPY4P0CV99 314 aa11.65□□□□□ -0.54
SCAPER-221ENST00000568549 TSPY10P0CW01 314 aa11.65□□□□□ -0.54
SCAPER-221ENST00000568549 TRIM26Q12899 539 aaPredicted RBP11.65□□□□□ -0.54
SCAPER-221ENST00000568549 C9orf84Q5VXU9 1444 aa11.65□□□□□ -0.54
SCAPER-221ENST00000568549 SPAG9O60271 1321 aaKnown RBP11.64□□□□□ -0.55
SCAPER-221ENST00000568549 PLXNC1O60486 1568 aa11.64□□□□□ -0.55
SCAPER-221ENST00000568549 MLH3Q9UHC1 1453 aa11.63□□□□□ -0.55
SCAPER-221ENST00000568549 RTEL1-TNFRSF6BF6WH68 1400 aa11.63□□□□□ -0.55
SCAPER-221ENST00000568549 PTPRKQ15262 1439 aa11.63□□□□□ -0.55
SCAPER-221ENST00000568549 MYT1LQ9UL68 1186 aa11.63□□□□□ -0.55
SCAPER-221ENST00000568549 ABCA6Q8N139 1617 aa11.63□□□□□ -0.55
SCAPER-221ENST00000568549 ADGRL2O95490 1459 aa11.63□□□□□ -0.55
SCAPER-221ENST00000568549 MAGI2Q86UL8 1455 aa11.63□□□□□ -0.55
SCAPER-221ENST00000568549 CHIC2Q9UKJ5 165 aa11.62□□□□□ -0.55
SCAPER-221ENST00000568549 ARHGEF40Q8TER5 1519 aa11.61□□□□□ -0.55
SCAPER-221ENST00000568549 DIP2CQ9Y2E4 1556 aa11.61□□□□□ -0.55
SCAPER-221ENST00000568549 GCC2Q8IWJ2 1684 aa11.61□□□□□ -0.55
SCAPER-221ENST00000568549 ROCK1Q13464 1354 aa11.6□□□□□ -0.55
SCAPER-221ENST00000568549 ANKRD30AQ9BXX3 1397 aa11.6□□□□□ -0.55
SCAPER-221ENST00000568549 YEATS2Q9ULM3 1422 aa11.6□□□□□ -0.55
SCAPER-221ENST00000568549 NCOA1Q15788 1441 aa11.59□□□□□ -0.55
SCAPER-221ENST00000568549 KIF15Q9NS87 1388 aa11.57□□□□□ -0.56
SCAPER-221ENST00000568549 DUOX2Q9NRD8 1548 aa11.57□□□□□ -0.56
SCAPER-221ENST00000568549 RRP7BPQ9NSQ0 103 aa11.56□□□□□ -0.56
SCAPER-221ENST00000568549 REREQ9P2R6 1566 aa11.56□□□□□ -0.56
SCAPER-221ENST00000568549 ATP10AO60312 1499 aa11.56□□□□□ -0.56
SCAPER-221ENST00000568549 A2MP01023 1474 aa11.56□□□□□ -0.56
SCAPER-221ENST00000568549 HFM1A2PYH4 1435 aa11.55□□□□□ -0.56
SCAPER-221ENST00000568549 EIF2AK4Q9P2K8 1649 aaKnown RBP11.55□□□□□ -0.56
SCAPER-221ENST00000568549 SIGLEC1Q9BZZ2 1709 aa11.55□□□□□ -0.56
SCAPER-221ENST00000568549 NAIPQ13075 1403 aa11.54□□□□□ -0.56
SCAPER-221ENST00000568549 BCORL1Q5H9F3 1711 aa11.54□□□□□ -0.56
SCAPER-221ENST00000568549 ERBINQ96RT1 1412 aa11.53□□□□□ -0.56
SCAPER-221ENST00000568549 PCGF6Q9BYE7 350 aa11.53□□□□□ -0.56
SCAPER-221ENST00000568549 DHX29Q7Z478 1369 aaKnown RBP11.53□□□□□ -0.56
SCAPER-221ENST00000568549 ANKRD50Q9ULJ7 1429 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms