RNA–Protein interactions for RNA: ENST00000568468.5

GINS3-210, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-210ENST00000568468 FKBP8Q14318 412 aa9.52□□□□□ -0.89
GINS3-210ENST00000568468 MAPKBP1O60336 1514 aa9.51□□□□□ -0.89
GINS3-210ENST00000568468 ABCA8O94911 1581 aa9.51□□□□□ -0.89
GINS3-210ENST00000568468 KDM5BQ9UGL1 1544 aa9.51□□□□□ -0.89
GINS3-210ENST00000568468 CASKIN1Q8WXD9 1431 aa9.5□□□□□ -0.89
GINS3-210ENST00000568468 PITPNM1O00562 1244 aa9.5□□□□□ -0.89
GINS3-210ENST00000568468 RAPGEF6Q8TEU7 1601 aa9.49□□□□□ -0.89
GINS3-210ENST00000568468 FYCO1Q9BQS8 1478 aa9.48□□□□□ -0.89
GINS3-210ENST00000568468 CDK13Q14004 1512 aaKnown RBP9.48□□□□□ -0.89
GINS3-210ENST00000568468 NPM1P06748 294 aaKnown RBP eCLIP9.48□□□□□ -0.89
GINS3-210ENST00000568468 KANK4Q5T7N3 995 aaPredicted RBP9.48□□□□□ -0.89
GINS3-210ENST00000568468 NUP153P49790 1475 aaKnown RBP9.47□□□□□ -0.89
GINS3-210ENST00000568468 ABCC10Q5T3U5 1492 aa9.47□□□□□ -0.89
GINS3-210ENST00000568468 SPDYE1Q8NFV5 336 aaPredicted RBP9.47□□□□□ -0.89
GINS3-210ENST00000568468 ASXL2Q76L83 1435 aa9.46□□□□□ -0.9
GINS3-210ENST00000568468 ZCCHC11Q5TAX3 1644 aaKnown RBP9.45□□□□□ -0.9
GINS3-210ENST00000568468 HECW1Q76N89 1606 aa9.45□□□□□ -0.9
GINS3-210ENST00000568468 EPRSP07814 1512 aaKnown RBP9.45□□□□□ -0.9
GINS3-210ENST00000568468 DIP2BQ9P265 1576 aa9.45□□□□□ -0.9
GINS3-210ENST00000568468 ATP10BO94823 1461 aa9.44□□□□□ -0.9
GINS3-210ENST00000568468 LRRIQ1Q96JM4 1722 aa9.43□□□□□ -0.9
GINS3-210ENST00000568468 TIAM1Q13009 1591 aa9.43□□□□□ -0.9
GINS3-210ENST00000568468 KIF13AQ9H1H9 1805 aa9.42□□□□□ -0.9
GINS3-210ENST00000568468 MAGI3Q5TCQ9 1506 aa9.42□□□□□ -0.9
GINS3-210ENST00000568468 CCDC18Q5T9S5 1454 aa9.41□□□□□ -0.9
GINS3-210ENST00000568468 WDR7Q9Y4E6 1490 aa9.41□□□□□ -0.9
GINS3-210ENST00000568468 FAM69CQ0P6D2 419 aa9.41□□□□□ -0.9
GINS3-210ENST00000568468 CLEC11AQ9Y240 323 aa9.41□□□□□ -0.9
GINS3-210ENST00000568468 GLI2P10070 1586 aa9.41□□□□□ -0.9
GINS3-210ENST00000568468 LRRC9Q6ZRR7 1453 aa9.4□□□□□ -0.9
GINS3-210ENST00000568468 MTUS2Q5JR59 1369 aa9.4□□□□□ -0.9
GINS3-210ENST00000568468 CFAP43Q8NDM7 1665 aa9.4□□□□□ -0.9
GINS3-210ENST00000568468 MAP3K1Q13233 1512 aa9.38□□□□□ -0.91
GINS3-210ENST00000568468 PIP4P2Q8N4L2 257 aa9.38□□□□□ -0.91
GINS3-210ENST00000568468 PLEKHD1A6NEE1 506 aa9.37□□□□□ -0.91
GINS3-210ENST00000568468 FXR2P51116 673 aaKnown RBP eCLIP9.37□□□□□ -0.91
GINS3-210ENST00000568468 KCNH8Q96L42 1107 aa9.37□□□□□ -0.91
GINS3-210ENST00000568468 CDK11AQ9UQ88 783 aaPredicted RBP9.36□□□□□ -0.91
GINS3-210ENST00000568468 TROQ12816 1431 aaPredicted RBP9.36□□□□□ -0.91
GINS3-210ENST00000568468 EHBP1L1Q8N3D4 1523 aa9.36□□□□□ -0.91
GINS3-210ENST00000568468 MAP3K4Q9Y6R4 1608 aa9.35□□□□□ -0.91
GINS3-210ENST00000568468 PHLDB1Q86UU1 1377 aa9.35□□□□□ -0.91
GINS3-210ENST00000568468 PPRC1Q5VV67 1664 aaKnown RBP9.34□□□□□ -0.91
GINS3-210ENST00000568468 NCOA2Q15596 1464 aa9.34□□□□□ -0.91
GINS3-210ENST00000568468 KIF14Q15058 1648 aa9.33□□□□□ -0.92
GINS3-210ENST00000568468 CD109Q6YHK3 1445 aa9.31□□□□□ -0.92
GINS3-210ENST00000568468 ABCA9Q8IUA7 1624 aa9.31□□□□□ -0.92
GINS3-210ENST00000568468 TEX14Q8IWB6 1497 aa9.3□□□□□ -0.92
GINS3-210ENST00000568468 CCNB3Q8WWL7 1395 aa9.3□□□□□ -0.92
GINS3-210ENST00000568468 PRR29P0C7W0 189 aa9.3□□□□□ -0.92
GINS3-210ENST00000568468 STAG3Q9UJ98 1225 aa9.3□□□□□ -0.92
GINS3-210ENST00000568468 SUPT6HQ7KZ85 1726 aaKnown RBP9.3□□□□□ -0.92
GINS3-210ENST00000568468 TSPOAP1O95153 1857 aa9.3□□□□□ -0.92
GINS3-210ENST00000568468 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.28□□□□□ -0.92
GINS3-210ENST00000568468 FAM50AQ14320 339 aaKnown RBP9.28□□□□□ -0.92
GINS3-210ENST00000568468 ZNF777Q9ULD5 760 aaPredicted RBP9.28□□□□□ -0.92
GINS3-210ENST00000568468 MYOM3Q5VTT5 1437 aa9.28□□□□□ -0.92
GINS3-210ENST00000568468 TTC37Q6PGP7 1564 aa9.28□□□□□ -0.92
GINS3-210ENST00000568468 ZNF644Q9H582 1327 aaPredicted RBP9.28□□□□□ -0.92
GINS3-210ENST00000568468 COL17A1Q9UMD9 1497 aaPredicted RBP9.28□□□□□ -0.92
GINS3-210ENST00000568468 ITGAEP38570 1179 aa9.27□□□□□ -0.93
GINS3-210ENST00000568468 TRIM26Q12899 539 aaPredicted RBP9.27□□□□□ -0.93
GINS3-210ENST00000568468 PCGF6Q9BYE7 350 aa9.27□□□□□ -0.93
GINS3-210ENST00000568468 KDM6BO15054 1643 aa9.27□□□□□ -0.93
GINS3-210ENST00000568468 GPATCH8Q9UKJ3 1502 aaKnown RBP9.26□□□□□ -0.93
GINS3-210ENST00000568468 FGD6Q6ZV73 1430 aa9.26□□□□□ -0.93
GINS3-210ENST00000568468 PRKAR2AP13861 404 aaKnown RBP9.26□□□□□ -0.93
GINS3-210ENST00000568468 CFDP1Q9UEE9 299 aaPredicted RBP9.26□□□□□ -0.93
GINS3-210ENST00000568468 RRBP1Q9P2E9 1410 aaKnown RBP9.24□□□□□ -0.93
GINS3-210ENST00000568468 NEO1Q92859 1461 aa9.24□□□□□ -0.93
GINS3-210ENST00000568468 ARAP3Q8WWN8 1544 aa9.23□□□□□ -0.93
GINS3-210ENST00000568468 PLCH2O75038 1416 aa9.22□□□□□ -0.93
GINS3-210ENST00000568468 ARHGAP5Q13017 1502 aa9.22□□□□□ -0.93
GINS3-210ENST00000568468 PTPN23Q9H3S7 1636 aa9.22□□□□□ -0.93
GINS3-210ENST00000568468 FANCAO15360 1455 aa9.21□□□□□ -0.93
GINS3-210ENST00000568468 HNRNPMP52272 730 aaKnown RBP eCLIP9.21□□□□□ -0.94
GINS3-210ENST00000568468 FBXO3Q9UK99 471 aa9.21□□□□□ -0.94
GINS3-210ENST00000568468 MIA2Q96PC5 1412 aa9.21□□□□□ -0.94
GINS3-210ENST00000568468 CAMSAP2Q08AD1 1489 aa9.21□□□□□ -0.94
GINS3-210ENST00000568468 CDC42BPAQ5VT25 1732 aa9.2□□□□□ -0.94
GINS3-210ENST00000568468 AKNAQ7Z591 1439 aa9.2□□□□□ -0.94
GINS3-210ENST00000568468 TCOF1Q13428 1488 aaKnown RBP9.2□□□□□ -0.94
GINS3-210ENST00000568468 CFAP74Q9C0B2 1584 aa9.2□□□□□ -0.94
GINS3-210ENST00000568468 PREX2Q70Z35 1606 aa9.2□□□□□ -0.94
GINS3-210ENST00000568468 EFCAB2Q5VUJ9 269 aa9.19□□□□□ -0.94
GINS3-210ENST00000568468 CHIC2Q9UKJ5 165 aa9.19□□□□□ -0.94
GINS3-210ENST00000568468 FRMPD1Q5SYB0 1578 aa9.19□□□□□ -0.94
GINS3-210ENST00000568468 SAMD9LQ8IVG5 1584 aa9.19□□□□□ -0.94
GINS3-210ENST00000568468 ITSN2Q9NZM3 1697 aa9.19□□□□□ -0.94
GINS3-210ENST00000568468 PTPRKQ15262 1439 aa9.18□□□□□ -0.94
GINS3-210ENST00000568468 CHADLQ6NUI6 762 aa9.18□□□□□ -0.94
GINS3-210ENST00000568468 MYO5CQ9NQX4 1742 aa9.18□□□□□ -0.94
GINS3-210ENST00000568468 CDC42BPBQ9Y5S2 1711 aa9.18□□□□□ -0.94
GINS3-210ENST00000568468 SYCP2Q9BX26 1530 aa9.17□□□□□ -0.94
GINS3-210ENST00000568468 ARHGEF12Q9NZN5 1544 aa9.17□□□□□ -0.94
GINS3-210ENST00000568468 DENND4BO75064 1496 aaPredicted RBP9.16□□□□□ -0.94
GINS3-210ENST00000568468 ADGRL1O94910 1474 aa9.16□□□□□ -0.94
GINS3-210ENST00000568468 ABCC5O15440 1437 aa9.16□□□□□ -0.94
GINS3-210ENST00000568468 RAPGEF3O95398 923 aa9.16□□□□□ -0.94
GINS3-210ENST00000568468 DAPK1P53355 1430 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms