RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 RB1CC1Q8TDY2 1594 aa10.88□□□□□ -0.67
CAPN3-218ENST00000568153 MICALL2Q8IY33 904 aa10.87□□□□□ -0.67
CAPN3-218ENST00000568153 C3orf67Q6ZVT6 689 aa10.86□□□□□ -0.67
CAPN3-218ENST00000568153 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.86□□□□□ -0.67
CAPN3-218ENST00000568153 SLAIN1Q8ND83 568 aa10.85□□□□□ -0.67
CAPN3-218ENST00000568153 G3V3G9 751 aa10.84□□□□□ -0.67
CAPN3-218ENST00000568153 PPP1R37O75864 691 aa10.83□□□□□ -0.68
CAPN3-218ENST00000568153 RYDENQ9NUL5 291 aaKnown RBP10.82□□□□□ -0.68
CAPN3-218ENST00000568153 SUPT5HO00267 1087 aaKnown RBP10.8□□□□□ -0.68
CAPN3-218ENST00000568153 SCRIBQ14160 1630 aa10.78□□□□□ -0.68
CAPN3-218ENST00000568153 SLC24A1O60721 1099 aa10.78□□□□□ -0.68
CAPN3-218ENST00000568153 TMEM92Q6UXU6 159 aa10.78□□□□□ -0.68
CAPN3-218ENST00000568153 HAP1P54257 671 aaPredicted RBP10.77□□□□□ -0.69
CAPN3-218ENST00000568153 TSHZ2Q9NRE2 1034 aa10.73□□□□□ -0.69
CAPN3-218ENST00000568153 LCE2DQ5TA82 110 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-218ENST00000568153 KIF3CO14782 793 aa10.69□□□□□ -0.7
CAPN3-218ENST00000568153 FAM163AQ96GL9 167 aaPredicted RBP10.66□□□□□ -0.7
CAPN3-218ENST00000568153 SNPHO15079 494 aa10.65□□□□□ -0.7
CAPN3-218ENST00000568153 HOXB3P14651 431 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-218ENST00000568153 C2orf72A6NCS6 295 aa10.64□□□□□ -0.71
CAPN3-218ENST00000568153 CADPS2Q86UW7 1296 aa10.64□□□□□ -0.71
CAPN3-218ENST00000568153 ST18O60284 1047 aa10.62□□□□□ -0.71
CAPN3-218ENST00000568153 KDM2AQ9Y2K7 1162 aa10.6□□□□□ -0.71
CAPN3-218ENST00000568153 VSIG10Q8N0Z9 540 aa10.59□□□□□ -0.71
CAPN3-218ENST00000568153 TMC2Q8TDI7 906 aa10.59□□□□□ -0.71
CAPN3-218ENST00000568153 GPHNQ9NQX3 736 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-218ENST00000568153 CRISPLD2Q9H0B8 497 aa10.57□□□□□ -0.72
CAPN3-218ENST00000568153 DOK7Q18PE1 504 aa10.56□□□□□ -0.72
CAPN3-218ENST00000568153 NCKAP5LQ9HCH0 1330 aa10.56□□□□□ -0.72
CAPN3-218ENST00000568153 RSF1Q96T23 1441 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-218ENST00000568153 POTEMA6NI47 508 aa10.54□□□□□ -0.72
CAPN3-218ENST00000568153 FOXK1P85037 733 aa10.54□□□□□ -0.72
CAPN3-218ENST00000568153 POTEGQ6S5H5 508 aa10.54□□□□□ -0.72
CAPN3-218ENST00000568153 CECR2Q9BXF3 1484 aa10.54□□□□□ -0.72
CAPN3-218ENST00000568153 DSG2Q14126 1118 aa10.52□□□□□ -0.73
CAPN3-218ENST00000568153 ZNF710Q8N1W2 664 aa10.51□□□□□ -0.73
CAPN3-218ENST00000568153 ZSWIM6Q9HCJ5 1215 aa10.5□□□□□ -0.73
CAPN3-218ENST00000568153 BICRAQ9NZM4 1560 aa10.5□□□□□ -0.73
CAPN3-218ENST00000568153 RIMBP2O15034 1052 aa10.49□□□□□ -0.73
CAPN3-218ENST00000568153 SLC34A2O95436 690 aa10.49□□□□□ -0.73
CAPN3-218ENST00000568153 HOXB1P14653 301 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-218ENST00000568153 PDE4AP27815 886 aa10.49□□□□□ -0.73
CAPN3-218ENST00000568153 GPR153Q6NV75 609 aa10.49□□□□□ -0.73
CAPN3-218ENST00000568153 PLPP6Q8IY26 295 aa10.49□□□□□ -0.73
CAPN3-218ENST00000568153 MARVELD3Q96A59 401 aa10.49□□□□□ -0.73
CAPN3-218ENST00000568153 MFSD10Q14728 455 aa10.47□□□□□ -0.73
CAPN3-218ENST00000568153 LARP6Q9BRS8 491 aaKnown RBP10.47□□□□□ -0.73
CAPN3-218ENST00000568153 PPP1R15BQ5SWA1 713 aa10.46□□□□□ -0.73
CAPN3-218ENST00000568153 UNC13AQ9UPW8 1703 aa10.46□□□□□ -0.74
CAPN3-218ENST00000568153 MROH2BQ7Z745 1585 aa10.45□□□□□ -0.74
CAPN3-218ENST00000568153 EMP3P54852 163 aa10.44□□□□□ -0.74
CAPN3-218ENST00000568153 ARSIQ5FYB1 569 aa10.44□□□□□ -0.74
CAPN3-218ENST00000568153 BAZ1AQ9NRL2 1556 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-218ENST00000568153 DDX27Q96GQ7 796 aaKnown RBP10.43□□□□□ -0.74
CAPN3-218ENST00000568153 PTCD2Q8WV60 388 aaKnown RBP10.42□□□□□ -0.74
CAPN3-218ENST00000568153 KHSRPQ92945 711 aaKnown RBP eCLIP10.42□□□□□ -0.74
CAPN3-218ENST00000568153 WDR70Q9NW82 654 aa10.42□□□□□ -0.74
CAPN3-218ENST00000568153 PCDHGA4Q9Y5G9 962 aa10.42□□□□□ -0.74
CAPN3-218ENST00000568153 POTEB3A0JP26 581 aa10.4□□□□□ -0.74
CAPN3-218ENST00000568153 POTEBQ6S5H4 581 aa10.4□□□□□ -0.74
CAPN3-218ENST00000568153 OXER1Q8TDS5 423 aa10.38□□□□□ -0.75
CAPN3-218ENST00000568153 KDM4FA0A1W2PPD8 638 aa10.37□□□□□ -0.75
CAPN3-218ENST00000568153 FAM205CA6NFA0 338 aa10.37□□□□□ -0.75
CAPN3-218ENST00000568153 HS3ST6Q96QI5 342 aa10.37□□□□□ -0.75
CAPN3-218ENST00000568153 NUDT7P0C024 238 aa10.36□□□□□ -0.75
CAPN3-218ENST00000568153 E2F4Q16254 413 aa10.34□□□□□ -0.75
CAPN3-218ENST00000568153 KCNV2Q8TDN2 545 aa10.34□□□□□ -0.75
CAPN3-218ENST00000568153 PCDH10Q9P2E7 1040 aa10.34□□□□□ -0.75
CAPN3-218ENST00000568153 ERBB3P21860 1342 aa10.33□□□□□ -0.76
CAPN3-218ENST00000568153 SMARCA4P51532 1647 aa10.33□□□□□ -0.76
CAPN3-218ENST00000568153 CAMK2BQ13554 666 aa10.33□□□□□ -0.76
CAPN3-218ENST00000568153 CDAN1Q8IWY9 1227 aa10.33□□□□□ -0.76
CAPN3-218ENST00000568153 UPF1Q92900 1129 aaKnown RBP eCLIP10.33□□□□□ -0.76
CAPN3-218ENST00000568153 EMILIN3Q9NT22 766 aa10.33□□□□□ -0.76
CAPN3-218ENST00000568153 ZNF316A6NFI3 1004 aaPredicted RBP10.32□□□□□ -0.76
CAPN3-218ENST00000568153 VARS2Q5ST30 1063 aaKnown RBP10.32□□□□□ -0.76
CAPN3-218ENST00000568153 TBC1D12O60347 775 aa10.31□□□□□ -0.76
CAPN3-218ENST00000568153 WIZO95785 1651 aa10.31□□□□□ -0.76
CAPN3-218ENST00000568153 P3H3Q8IVL6 736 aa10.3□□□□□ -0.76
CAPN3-218ENST00000568153 LHX6Q9UPM6 363 aa10.3□□□□□ -0.76
CAPN3-218ENST00000568153 ATAD2BQ9ULI0 1458 aa10.27□□□□□ -0.77
CAPN3-218ENST00000568153 ZNF687Q8N1G0 1237 aa10.25□□□□□ -0.77
CAPN3-218ENST00000568153 KRTAP3-3Q9BYR6 98 aa10.25□□□□□ -0.77
CAPN3-218ENST00000568153 KRTAP3-2Q9BYR7 98 aa10.25□□□□□ -0.77
CAPN3-218ENST00000568153 ARHGEF1Q92888 912 aaKnown RBP10.24□□□□□ -0.77
CAPN3-218ENST00000568153 ANO8Q9HCE9 1232 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-218ENST00000568153 ARIH1Q9Y4X5 557 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-218ENST00000568153 TOP2AP11388 1531 aaKnown RBP10.23□□□□□ -0.77
CAPN3-218ENST00000568153 SMARCA2P51531 1590 aa10.22□□□□□ -0.77
CAPN3-218ENST00000568153 PEG3Q9GZU2 1588 aa10.22□□□□□ -0.77
CAPN3-218ENST00000568153 DPYSL4O14531 572 aa10.22□□□□□ -0.77
CAPN3-218ENST00000568153 EVI5O60447 810 aa10.22□□□□□ -0.77
CAPN3-218ENST00000568153 MAP3K9P80192 1104 aa10.22□□□□□ -0.77
CAPN3-218ENST00000568153 PSDA5PKW4 1024 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-218ENST00000568153 CCDC88BA6NC98 1476 aa10.21□□□□□ -0.78
CAPN3-218ENST00000568153 NCAPD3P42695 1498 aa10.21□□□□□ -0.78
CAPN3-218ENST00000568153 EIF4G1Q04637 1599 aaKnown RBP10.21□□□□□ -0.78
CAPN3-218ENST00000568153 BAZ1BQ9UIG0 1483 aaKnown RBP10.19□□□□□ -0.78
CAPN3-218ENST00000568153 POTEEQ6S8J3 1075 aa10.18□□□□□ -0.78
CAPN3-218ENST00000568153 BCANQ96GW7 911 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms