RNA–Protein interactions for RNA: ENST00000567954.5

LYRM1-208, Transcript of LYR motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYRM1, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-208ENST00000567954 PKD2Q13563 968 aa13.54□□□□□ -0.24
LYRM1-208ENST00000567954 ZFYVE16Q7Z3T8 1539 aa13.54□□□□□ -0.24
LYRM1-208ENST00000567954 ABCA9Q8IUA7 1624 aa13.53□□□□□ -0.24
LYRM1-208ENST00000567954 EFCAB5A4FU69 1503 aa13.53□□□□□ -0.24
LYRM1-208ENST00000567954 ZMYM4Q5VZL5 1548 aa13.5□□□□□ -0.25
LYRM1-208ENST00000567954 PTPRKQ15262 1439 aa13.5□□□□□ -0.25
LYRM1-208ENST00000567954 KIF27Q86VH2 1401 aa13.5□□□□□ -0.25
LYRM1-208ENST00000567954 KIAA0556O60303 1618 aa13.5□□□□□ -0.25
LYRM1-208ENST00000567954 ABCA8O94911 1581 aa13.49□□□□□ -0.25
LYRM1-208ENST00000567954 SENP3Q9H4L4 574 aaPredicted RBP13.49□□□□□ -0.25
LYRM1-208ENST00000567954 PPP6R1Q9UPN7 881 aa13.49□□□□□ -0.25
LYRM1-208ENST00000567954 CAMSAP1Q5T5Y3 1602 aa13.48□□□□□ -0.25
LYRM1-208ENST00000567954 ATP10AO60312 1499 aa13.48□□□□□ -0.25
LYRM1-208ENST00000567954 ARID3CA6NKF2 412 aa13.47□□□□□ -0.25
LYRM1-208ENST00000567954 C9orf84Q5VXU9 1444 aa13.46□□□□□ -0.26
LYRM1-208ENST00000567954 RICTORQ6R327 1708 aa13.45□□□□□ -0.26
LYRM1-208ENST00000567954 ATP10BO94823 1461 aa13.45□□□□□ -0.26
LYRM1-208ENST00000567954 CPS1P31327 1500 aa13.43□□□□□ -0.26
LYRM1-208ENST00000567954 IFFO2Q5TF58 517 aa13.42□□□□□ -0.26
LYRM1-208ENST00000567954 ESF1Q9H501 851 aaKnown RBP13.42□□□□□ -0.26
LYRM1-208ENST00000567954 PLA2R1Q13018 1463 aa13.42□□□□□ -0.26
LYRM1-208ENST00000567954 TCOF1Q13428 1488 aaKnown RBP13.41□□□□□ -0.26
LYRM1-208ENST00000567954 ALKQ9UM73 1620 aa13.39□□□□□ -0.27
LYRM1-208ENST00000567954 HECW1Q76N89 1606 aa13.39□□□□□ -0.27
LYRM1-208ENST00000567954 RAPGEF2Q9Y4G8 1499 aa13.38□□□□□ -0.27
LYRM1-208ENST00000567954 SHANK2Q9UPX8 1470 aa13.37□□□□□ -0.27
LYRM1-208ENST00000567954 FAM9AQ8IZU1 332 aaPredicted RBP13.37□□□□□ -0.27
LYRM1-208ENST00000567954 NPATQ14207 1427 aa13.36□□□□□ -0.27
LYRM1-208ENST00000567954 SETD1AO15047 1707 aaKnown RBP13.36□□□□□ -0.27
LYRM1-208ENST00000567954 GOLGA3Q08378 1498 aa13.35□□□□□ -0.27
LYRM1-208ENST00000567954 SCAPERQ9BY12 1400 aa13.33□□□□□ -0.28
LYRM1-208ENST00000567954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.33□□□□□ -0.28
LYRM1-208ENST00000567954 HNRNPUL2Q1KMD3 747 aaKnown RBP13.33□□□□□ -0.28
LYRM1-208ENST00000567954 C3P01024 1663 aa13.32□□□□□ -0.28
LYRM1-208ENST00000567954 CNTLNQ9NXG0 1405 aa13.31□□□□□ -0.28
LYRM1-208ENST00000567954 TRIM52Q96A61 297 aa13.29□□□□□ -0.28
LYRM1-208ENST00000567954 CFAP74Q9C0B2 1584 aa13.28□□□□□ -0.28
LYRM1-208ENST00000567954 FOXD1Q16676 465 aa13.27□□□□□ -0.29
LYRM1-208ENST00000567954 PLEKHD1A6NEE1 506 aa13.26□□□□□ -0.29
LYRM1-208ENST00000567954 ZMYM3Q14202 1370 aa13.26□□□□□ -0.29
LYRM1-208ENST00000567954 ZRANB1Q9UGI0 708 aa13.26□□□□□ -0.29
LYRM1-208ENST00000567954 AGLP35573 1532 aa13.25□□□□□ -0.29
LYRM1-208ENST00000567954 RBM33Q96EV2 1170 aaKnown RBP13.24□□□□□ -0.29
LYRM1-208ENST00000567954 ZNF772Q68DY9 489 aaPredicted RBP13.22□□□□□ -0.29
LYRM1-208ENST00000567954 MYT1LQ9UL68 1186 aa13.21□□□□□ -0.29
LYRM1-208ENST00000567954 AFAP1Q8N556 730 aa13.2□□□□□ -0.3
LYRM1-208ENST00000567954 FAM135BQ49AJ0 1406 aa13.2□□□□□ -0.3
LYRM1-208ENST00000567954 RXRBP28702 533 aa13.19□□□□□ -0.3
LYRM1-208ENST00000567954 REREQ9P2R6 1566 aa13.19□□□□□ -0.3
LYRM1-208ENST00000567954 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.18□□□□□ -0.3
LYRM1-208ENST00000567954 LRRC7Q96NW7 1537 aa13.18□□□□□ -0.3
LYRM1-208ENST00000567954 VWDEQ8N2E2 1590 aa13.18□□□□□ -0.3
LYRM1-208ENST00000567954 CEP170BQ9Y4F5 1589 aaPredicted RBP13.18□□□□□ -0.3
LYRM1-208ENST00000567954 PLCH2O75038 1416 aa13.17□□□□□ -0.3
LYRM1-208ENST00000567954 EFCAB2Q5VUJ9 269 aa13.17□□□□□ -0.3
LYRM1-208ENST00000567954 ZNF518AQ6AHZ1 1483 aa13.16□□□□□ -0.3
LYRM1-208ENST00000567954 ANKLE2Q86XL3 938 aa13.16□□□□□ -0.3
LYRM1-208ENST00000567954 P3H3Q8IVL6 736 aa13.16□□□□□ -0.3
LYRM1-208ENST00000567954 CDK12Q9NYV4 1490 aaPredicted RBP13.14□□□□□ -0.31
LYRM1-208ENST00000567954 ZNF142P52746 1687 aaPredicted RBP13.14□□□□□ -0.31
LYRM1-208ENST00000567954 SETBP1Q9Y6X0 1596 aa13.13□□□□□ -0.31
LYRM1-208ENST00000567954 RNF17Q9BXT8 1623 aaKnown RBP13.13□□□□□ -0.31
LYRM1-208ENST00000567954 NEURL4Q96JN8 1562 aa13.11□□□□□ -0.31
LYRM1-208ENST00000567954 DIP2CQ9Y2E4 1556 aa13.11□□□□□ -0.31
LYRM1-208ENST00000567954 A2ML1A8K2U0 1454 aa13.11□□□□□ -0.31
LYRM1-208ENST00000567954 MYO3AQ8NEV4 1616 aa13.11□□□□□ -0.31
LYRM1-208ENST00000567954 JCADQ9P266 1359 aa13.1□□□□□ -0.31
LYRM1-208ENST00000567954 NUP153P49790 1475 aaKnown RBP13.1□□□□□ -0.31
LYRM1-208ENST00000567954 MLH3Q9UHC1 1453 aa13.1□□□□□ -0.31
LYRM1-208ENST00000567954 KDM5CP41229 1560 aa13.09□□□□□ -0.31
LYRM1-208ENST00000567954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.08□□□□□ -0.31
LYRM1-208ENST00000567954 NPHP4O75161 1426 aaPredicted RBP13.08□□□□□ -0.32
LYRM1-208ENST00000567954 MEX3CQ5U5Q3 659 aaKnown RBP13.07□□□□□ -0.32
LYRM1-208ENST00000567954 MED14O60244 1454 aa13.07□□□□□ -0.32
LYRM1-208ENST00000567954 DNMT1P26358 1616 aaKnown RBP13.06□□□□□ -0.32
LYRM1-208ENST00000567954 MROH2AA6NES4 1674 aa13.05□□□□□ -0.32
LYRM1-208ENST00000567954 RAPGEF6Q8TEU7 1601 aa13.04□□□□□ -0.32
LYRM1-208ENST00000567954 THEMISQ8N1K5 641 aaPredicted RBP13.04□□□□□ -0.32
LYRM1-208ENST00000567954 SPATA31A6Q5VVP1 1343 aa13.04□□□□□ -0.32
LYRM1-208ENST00000567954 NUTM2BA6NNL0 878 aaPredicted RBP13.03□□□□□ -0.32
LYRM1-208ENST00000567954 NUTM2EB1AL46 878 aaPredicted RBP13.03□□□□□ -0.32
LYRM1-208ENST00000567954 YY1P25490 414 aa13.03□□□□□ -0.32
LYRM1-208ENST00000567954 NUTM2DQ5VT03 806 aaPredicted RBP13.03□□□□□ -0.32
LYRM1-208ENST00000567954 NUTM2AQ8IVF1 878 aaPredicted RBP13.03□□□□□ -0.32
LYRM1-208ENST00000567954 SYNMO15061 1565 aa13.02□□□□□ -0.33
LYRM1-208ENST00000567954 CDK13Q14004 1512 aaKnown RBP13.01□□□□□ -0.33
LYRM1-208ENST00000567954 ABCA6Q8N139 1617 aa13.01□□□□□ -0.33
LYRM1-208ENST00000567954 SUPT6HQ7KZ85 1726 aaKnown RBP13.01□□□□□ -0.33
LYRM1-208ENST00000567954 LRP6O75581 1613 aa12.99□□□□□ -0.33
LYRM1-208ENST00000567954 ATAD2Q6PL18 1390 aa12.99□□□□□ -0.33
LYRM1-208ENST00000567954 RGS12O14924 1447 aa12.98□□□□□ -0.33
LYRM1-208ENST00000567954 POLR1AO95602 1720 aaPredicted RBP12.97□□□□□ -0.33
LYRM1-208ENST00000567954 RBM6P78332 1123 aaKnown RBP12.96□□□□□ -0.33
LYRM1-208ENST00000567954 CCDC125Q86Z20 511 aa12.96□□□□□ -0.33
LYRM1-208ENST00000567954 TNRQ92752 1358 aa12.95□□□□□ -0.34
LYRM1-208ENST00000567954 ABCC1P33527 1531 aa12.95□□□□□ -0.34
LYRM1-208ENST00000567954 GGT6Q6P531 493 aa12.95□□□□□ -0.34
LYRM1-208ENST00000567954 CTTNBP2Q8WZ74 1663 aa12.95□□□□□ -0.34
LYRM1-208ENST00000567954 STRCP1A6NGW2 1772 aa12.94□□□□□ -0.34
LYRM1-208ENST00000567954 KDM5DQ9BY66 1539 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms