RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CFAP44Q96MT7 982 aa10.96□□□□□ -0.65
CAPN3-217ENST00000567817 SNPHO15079 494 aa10.94□□□□□ -0.66
CAPN3-217ENST00000567817 KIF3CO14782 793 aa10.93□□□□□ -0.66
CAPN3-217ENST00000567817 TMC2Q8TDI7 906 aa10.93□□□□□ -0.66
CAPN3-217ENST00000567817 C2orf72A6NCS6 295 aa10.91□□□□□ -0.66
CAPN3-217ENST00000567817 CRISPLD2Q9H0B8 497 aa10.88□□□□□ -0.67
CAPN3-217ENST00000567817 GPHNQ9NQX3 736 aaPredicted RBP10.88□□□□□ -0.67
CAPN3-217ENST00000567817 PDE4AP27815 886 aa10.85□□□□□ -0.67
CAPN3-217ENST00000567817 DOK7Q18PE1 504 aa10.85□□□□□ -0.67
CAPN3-217ENST00000567817 NCKAP5LQ9HCH0 1330 aa10.84□□□□□ -0.67
CAPN3-217ENST00000567817 HOXB3P14651 431 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-217ENST00000567817 FOXK1P85037 733 aa10.84□□□□□ -0.67
CAPN3-217ENST00000567817 PLCB2Q00722 1185 aa10.84□□□□□ -0.67
CAPN3-217ENST00000567817 CADPS2Q86UW7 1296 aa10.83□□□□□ -0.68
CAPN3-217ENST00000567817 FAM163AQ96GL9 167 aaPredicted RBP10.82□□□□□ -0.68
CAPN3-217ENST00000567817 RIMBP2O15034 1052 aa10.81□□□□□ -0.68
CAPN3-217ENST00000567817 DSG2Q14126 1118 aa10.8□□□□□ -0.68
CAPN3-217ENST00000567817 ST18O60284 1047 aa10.79□□□□□ -0.68
CAPN3-217ENST00000567817 MFSD10Q14728 455 aa10.79□□□□□ -0.68
CAPN3-217ENST00000567817 LCE2DQ5TA82 110 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-217ENST00000567817 PLPP6Q8IY26 295 aa10.79□□□□□ -0.68
CAPN3-217ENST00000567817 ZNF710Q8N1W2 664 aa10.79□□□□□ -0.68
CAPN3-217ENST00000567817 LARP6Q9BRS8 491 aaKnown RBP10.79□□□□□ -0.68
CAPN3-217ENST00000567817 PPP1R15BQ5SWA1 713 aa10.78□□□□□ -0.68
CAPN3-217ENST00000567817 DDX27Q96GQ7 796 aaKnown RBP10.78□□□□□ -0.68
CAPN3-217ENST00000567817 ZSWIM6Q9HCJ5 1215 aa10.78□□□□□ -0.68
CAPN3-217ENST00000567817 SLC34A2O95436 690 aa10.77□□□□□ -0.69
CAPN3-217ENST00000567817 CCDC180Q9P1Z9 1646 aa10.73□□□□□ -0.69
CAPN3-217ENST00000567817 TSHZ2Q9NRE2 1034 aa10.73□□□□□ -0.69
CAPN3-217ENST00000567817 HOXB1P14653 301 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-217ENST00000567817 GPR153Q6NV75 609 aa10.71□□□□□ -0.69
CAPN3-217ENST00000567817 PTCD2Q8WV60 388 aaKnown RBP10.7□□□□□ -0.7
CAPN3-217ENST00000567817 PCDHGA4Q9Y5G9 962 aa10.68□□□□□ -0.7
CAPN3-217ENST00000567817 POTEMA6NI47 508 aa10.67□□□□□ -0.7
CAPN3-217ENST00000567817 EMP3P54852 163 aa10.66□□□□□ -0.7
CAPN3-217ENST00000567817 ARSIQ5FYB1 569 aa10.66□□□□□ -0.7
CAPN3-217ENST00000567817 POTEGQ6S5H5 508 aa10.66□□□□□ -0.7
CAPN3-217ENST00000567817 TBC1D12O60347 775 aa10.65□□□□□ -0.7
CAPN3-217ENST00000567817 HAP1P54257 671 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-217ENST00000567817 CAMK2BQ13554 666 aa10.65□□□□□ -0.7
CAPN3-217ENST00000567817 OXER1Q8TDS5 423 aa10.65□□□□□ -0.7
CAPN3-217ENST00000567817 MARVELD3Q96A59 401 aa10.65□□□□□ -0.7
CAPN3-217ENST00000567817 WDR70Q9NW82 654 aa10.65□□□□□ -0.7
CAPN3-217ENST00000567817 UPF1Q92900 1129 aaKnown RBP eCLIP10.63□□□□□ -0.71
CAPN3-217ENST00000567817 KHSRPQ92945 711 aaKnown RBP eCLIP10.62□□□□□ -0.71
CAPN3-217ENST00000567817 NUDT7P0C024 238 aa10.61□□□□□ -0.71
CAPN3-217ENST00000567817 EMILIN3Q9NT22 766 aa10.61□□□□□ -0.71
CAPN3-217ENST00000567817 E2F4Q16254 413 aa10.59□□□□□ -0.71
CAPN3-217ENST00000567817 KDM4FA0A1W2PPD8 638 aa10.58□□□□□ -0.72
CAPN3-217ENST00000567817 ERBB3P21860 1342 aa10.58□□□□□ -0.72
CAPN3-217ENST00000567817 FAM205CA6NFA0 338 aa10.57□□□□□ -0.72
CAPN3-217ENST00000567817 ZNF316A6NFI3 1004 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-217ENST00000567817 HS3ST6Q96QI5 342 aa10.57□□□□□ -0.72
CAPN3-217ENST00000567817 MAP3K9P80192 1104 aa10.56□□□□□ -0.72
CAPN3-217ENST00000567817 ARIH1Q9Y4X5 557 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-217ENST00000567817 PSDA5PKW4 1024 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-217ENST00000567817 DPYSL4O14531 572 aa10.53□□□□□ -0.72
CAPN3-217ENST00000567817 VARS2Q5ST30 1063 aaKnown RBP10.53□□□□□ -0.72
CAPN3-217ENST00000567817 LHX6Q9UPM6 363 aa10.53□□□□□ -0.72
CAPN3-217ENST00000567817 EVI5O60447 810 aa10.52□□□□□ -0.73
CAPN3-217ENST00000567817 PCDH10Q9P2E7 1040 aa10.52□□□□□ -0.73
CAPN3-217ENST00000567817 POTEB3A0JP26 581 aa10.51□□□□□ -0.73
CAPN3-217ENST00000567817 POTEBQ6S5H4 581 aa10.51□□□□□ -0.73
CAPN3-217ENST00000567817 ANO8Q9HCE9 1232 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-217ENST00000567817 P3H3Q8IVL6 736 aa10.5□□□□□ -0.73
CAPN3-217ENST00000567817 VSIG10Q8N0Z9 540 aa10.5□□□□□ -0.73
CAPN3-217ENST00000567817 CDAN1Q8IWY9 1227 aa10.49□□□□□ -0.73
CAPN3-217ENST00000567817 PDIA6Q15084 440 aa10.48□□□□□ -0.73
CAPN3-217ENST00000567817 ZNF687Q8N1G0 1237 aa10.47□□□□□ -0.73
CAPN3-217ENST00000567817 KCNV2Q8TDN2 545 aa10.47□□□□□ -0.73
CAPN3-217ENST00000567817 KDM2AQ9Y2K7 1162 aa10.47□□□□□ -0.73
CAPN3-217ENST00000567817 SPDYE16A6NNV3 312 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-217ENST00000567817 ARHGEF1Q92888 912 aaKnown RBP10.46□□□□□ -0.73
CAPN3-217ENST00000567817 PPP4R3BQ5MIZ7 849 aa10.45□□□□□ -0.74
CAPN3-217ENST00000567817 JPH4Q96JJ6 628 aa10.45□□□□□ -0.74
CAPN3-217ENST00000567817 FOSBP53539 338 aa10.43□□□□□ -0.74
CAPN3-217ENST00000567817 ZNF454Q8N9F8 522 aa10.43□□□□□ -0.74
CAPN3-217ENST00000567817 PBX2P40425 430 aa10.41□□□□□ -0.74
CAPN3-217ENST00000567817 PTGER2P43116 358 aa10.41□□□□□ -0.74
CAPN3-217ENST00000567817 RB1CC1Q8TDY2 1594 aa10.4□□□□□ -0.74
CAPN3-217ENST00000567817 PHF14O94880 888 aa10.4□□□□□ -0.74
CAPN3-217ENST00000567817 KRTAP3-3Q9BYR6 98 aa10.39□□□□□ -0.75
CAPN3-217ENST00000567817 KRTAP3-2Q9BYR7 98 aa10.39□□□□□ -0.75
CAPN3-217ENST00000567817 ZDHHC16Q969W1 377 aa10.37□□□□□ -0.75
CAPN3-217ENST00000567817 EPAS1Q99814 870 aa10.37□□□□□ -0.75
CAPN3-217ENST00000567817 PCDHGA10Q9Y5H3 936 aa10.37□□□□□ -0.75
CAPN3-217ENST00000567817 TYW1BQ6NUM6 668 aa10.36□□□□□ -0.75
CAPN3-217ENST00000567817 FBXW7Q969H0 707 aa10.36□□□□□ -0.75
CAPN3-217ENST00000567817 BCL2L12Q9HB09 334 aa10.36□□□□□ -0.75
CAPN3-217ENST00000567817 POTEEQ6S8J3 1075 aa10.35□□□□□ -0.75
CAPN3-217ENST00000567817 DDX12PQ92771 950 aa10.35□□□□□ -0.75
CAPN3-217ENST00000567817 ARHGAP33O14559 1287 aa10.34□□□□□ -0.75
CAPN3-217ENST00000567817 KCNH8Q96L42 1107 aa10.34□□□□□ -0.75
CAPN3-217ENST00000567817 NBR1Q14596 966 aa10.32□□□□□ -0.76
CAPN3-217ENST00000567817 ADAM33Q9BZ11 813 aa10.32□□□□□ -0.76
CAPN3-217ENST00000567817 PTPREP23469 700 aa10.31□□□□□ -0.76
CAPN3-217ENST00000567817 LSM11P83369 360 aaKnown RBP eCLIP10.31□□□□□ -0.76
CAPN3-217ENST00000567817 AXIN2Q9Y2T1 843 aa10.31□□□□□ -0.76
CAPN3-217ENST00000567817 KCNK17Q96T54 332 aa10.3□□□□□ -0.76
CAPN3-217ENST00000567817 GRXCR2A6NFK2 248 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms