RNA–Protein interactions for RNA: ENST00000567811.1

SMPD3-210, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-210ENST00000567811 AFAP1Q8N556 730 aa11.44□□□□□ -0.58
SMPD3-210ENST00000567811 MYT1LQ9UL68 1186 aa11.44□□□□□ -0.58
SMPD3-210ENST00000567811 ZNF777Q9ULD5 760 aaPredicted RBP11.43□□□□□ -0.58
SMPD3-210ENST00000567811 FRMPD1Q5SYB0 1578 aa11.42□□□□□ -0.58
SMPD3-210ENST00000567811 ARHGAP5Q13017 1502 aa11.42□□□□□ -0.58
SMPD3-210ENST00000567811 MAGI2Q86UL8 1455 aa11.41□□□□□ -0.58
SMPD3-210ENST00000567811 MTUS2Q5JR59 1369 aa11.41□□□□□ -0.58
SMPD3-210ENST00000567811 CFDP1Q9UEE9 299 aaPredicted RBP11.4□□□□□ -0.58
SMPD3-210ENST00000567811 CDC42BPAQ5VT25 1732 aa11.4□□□□□ -0.58
SMPD3-210ENST00000567811 HNRNPMP52272 730 aaKnown RBP eCLIP11.39□□□□□ -0.59
SMPD3-210ENST00000567811 POGZQ7Z3K3 1410 aa11.38□□□□□ -0.59
SMPD3-210ENST00000567811 MLECQ14165 292 aa11.38□□□□□ -0.59
SMPD3-210ENST00000567811 CCNB3Q8WWL7 1395 aa11.38□□□□□ -0.59
SMPD3-210ENST00000567811 ATP10AO60312 1499 aa11.38□□□□□ -0.59
SMPD3-210ENST00000567811 ADAMTSL3P82987 1691 aa11.37□□□□□ -0.59
SMPD3-210ENST00000567811 YEATS2Q9ULM3 1422 aa11.37□□□□□ -0.59
SMPD3-210ENST00000567811 ZMYM4Q5VZL5 1548 aa11.37□□□□□ -0.59
SMPD3-210ENST00000567811 ZFYVE16Q7Z3T8 1539 aa11.37□□□□□ -0.59
SMPD3-210ENST00000567811 GPATCH8Q9UKJ3 1502 aaKnown RBP11.37□□□□□ -0.59
SMPD3-210ENST00000567811 PREX2Q70Z35 1606 aa11.37□□□□□ -0.59
SMPD3-210ENST00000567811 BCORL1Q5H9F3 1711 aa11.37□□□□□ -0.59
SMPD3-210ENST00000567811 ZNF518AQ6AHZ1 1483 aa11.36□□□□□ -0.59
SMPD3-210ENST00000567811 TRAPPC8Q9Y2L5 1435 aa11.35□□□□□ -0.59
SMPD3-210ENST00000567811 ARHGEF40Q8TER5 1519 aa11.34□□□□□ -0.59
SMPD3-210ENST00000567811 ARHGEF12Q9NZN5 1544 aa11.34□□□□□ -0.59
SMPD3-210ENST00000567811 PTPRMP28827 1452 aa11.33□□□□□ -0.6
SMPD3-210ENST00000567811 APLP2Q06481 763 aa11.33□□□□□ -0.6
SMPD3-210ENST00000567811 MLH3Q9UHC1 1453 aa11.32□□□□□ -0.6
SMPD3-210ENST00000567811 PLPPR3Q6T4P5 718 aa11.32□□□□□ -0.6
SMPD3-210ENST00000567811 ITSN2Q9NZM3 1697 aa11.32□□□□□ -0.6
SMPD3-210ENST00000567811 VPS8Q8N3P4 1428 aa11.32□□□□□ -0.6
SMPD3-210ENST00000567811 SPAG9O60271 1321 aaKnown RBP11.32□□□□□ -0.6
SMPD3-210ENST00000567811 ZNF644Q9H582 1327 aaPredicted RBP11.32□□□□□ -0.6
SMPD3-210ENST00000567811 SETD1BQ9UPS6 1966 aaKnown RBP11.31□□□□□ -0.6
SMPD3-210ENST00000567811 RSPH4AQ5TD94 716 aa11.31□□□□□ -0.6
SMPD3-210ENST00000567811 C9orf84Q5VXU9 1444 aa11.31□□□□□ -0.6
SMPD3-210ENST00000567811 KIAA1107Q9UPP5 1409 aa11.31□□□□□ -0.6
SMPD3-210ENST00000567811 KDM5CP41229 1560 aa11.31□□□□□ -0.6
SMPD3-210ENST00000567811 ABCC1P33527 1531 aa11.3□□□□□ -0.6
SMPD3-210ENST00000567811 SIGLEC1Q9BZZ2 1709 aa11.3□□□□□ -0.6
SMPD3-210ENST00000567811 SAMD9LQ8IVG5 1584 aa11.3□□□□□ -0.6
SMPD3-210ENST00000567811 KANK4Q5T7N3 995 aaPredicted RBP11.3□□□□□ -0.6
SMPD3-210ENST00000567811 MADDQ8WXG6 1647 aa11.3□□□□□ -0.6
SMPD3-210ENST00000567811 PLEKHH2Q8IVE3 1493 aa11.3□□□□□ -0.6
SMPD3-210ENST00000567811 EHBP1L1Q8N3D4 1523 aa11.3□□□□□ -0.6
SMPD3-210ENST00000567811 KIDINS220Q9ULH0 1771 aa11.29□□□□□ -0.6
SMPD3-210ENST00000567811 ESF1Q9H501 851 aaKnown RBP11.29□□□□□ -0.6
SMPD3-210ENST00000567811 RIMS1Q86UR5 1692 aaKnown RBP11.29□□□□□ -0.6
SMPD3-210ENST00000567811 SUPT6HQ7KZ85 1726 aaKnown RBP11.29□□□□□ -0.6
SMPD3-210ENST00000567811 HECW2Q9P2P5 1572 aa11.28□□□□□ -0.6
SMPD3-210ENST00000567811 TIAM1Q13009 1591 aa11.28□□□□□ -0.6
SMPD3-210ENST00000567811 NCOA2Q15596 1464 aa11.27□□□□□ -0.6
SMPD3-210ENST00000567811 CEBPAP49715 358 aaPredicted RBP11.27□□□□□ -0.61
SMPD3-210ENST00000567811 LRRC9Q6ZRR7 1453 aa11.26□□□□□ -0.61
SMPD3-210ENST00000567811 FER1L4A9Z1Z3 1794 aa11.26□□□□□ -0.61
SMPD3-210ENST00000567811 MAP3K1Q13233 1512 aa11.26□□□□□ -0.61
SMPD3-210ENST00000567811 SYCP2Q9BX26 1530 aa11.26□□□□□ -0.61
SMPD3-210ENST00000567811 DIP2CQ9Y2E4 1556 aa11.26□□□□□ -0.61
SMPD3-210ENST00000567811 TSPY4P0CV99 314 aa11.26□□□□□ -0.61
SMPD3-210ENST00000567811 TSPY10P0CW01 314 aa11.26□□□□□ -0.61
SMPD3-210ENST00000567811 ABCA6Q8N139 1617 aa11.24□□□□□ -0.61
SMPD3-210ENST00000567811 MBD5Q9P267 1494 aa11.24□□□□□ -0.61
SMPD3-210ENST00000567811 AGLP35573 1532 aa11.24□□□□□ -0.61
SMPD3-210ENST00000567811 REREQ9P2R6 1566 aa11.24□□□□□ -0.61
SMPD3-210ENST00000567811 GGT6Q6P531 493 aa11.23□□□□□ -0.61
SMPD3-210ENST00000567811 RTEL1-TNFRSF6BF6WH68 1400 aa11.22□□□□□ -0.61
SMPD3-210ENST00000567811 PPP6R1Q9UPN7 881 aa11.22□□□□□ -0.61
SMPD3-210ENST00000567811 ATP7AQ04656 1500 aa11.21□□□□□ -0.61
SMPD3-210ENST00000567811 A2MP01023 1474 aa11.2□□□□□ -0.62
SMPD3-210ENST00000567811 HSPA2P54652 639 aa11.2□□□□□ -0.62
SMPD3-210ENST00000567811 DHX29Q7Z478 1369 aaKnown RBP11.19□□□□□ -0.62
SMPD3-210ENST00000567811 ADGBQ8N7X0 1667 aa11.19□□□□□ -0.62
SMPD3-210ENST00000567811 CAMSAP2Q08AD1 1489 aa11.19□□□□□ -0.62
SMPD3-210ENST00000567811 ZMYM3Q14202 1370 aa11.18□□□□□ -0.62
SMPD3-210ENST00000567811 KIF3BO15066 747 aa11.18□□□□□ -0.62
SMPD3-210ENST00000567811 MIA2Q96PC5 1412 aa11.18□□□□□ -0.62
SMPD3-210ENST00000567811 INO80Q9ULG1 1556 aaPredicted RBP11.17□□□□□ -0.62
SMPD3-210ENST00000567811 CCDC141Q6ZP82 1450 aa11.17□□□□□ -0.62
SMPD3-210ENST00000567811 LMTK3Q96Q04 1460 aa11.17□□□□□ -0.62
SMPD3-210ENST00000567811 C3P01024 1663 aa11.17□□□□□ -0.62
SMPD3-210ENST00000567811 MYOM3Q5VTT5 1437 aa11.17□□□□□ -0.62
SMPD3-210ENST00000567811 CNTLNQ9NXG0 1405 aa11.17□□□□□ -0.62
SMPD3-210ENST00000567811 ARHGEF5Q12774 1597 aa11.16□□□□□ -0.62
SMPD3-210ENST00000567811 PREX1Q8TCU6 1659 aa11.14□□□□□ -0.63
SMPD3-210ENST00000567811 DMRT2Q9Y5R5 561 aa11.13□□□□□ -0.63
SMPD3-210ENST00000567811 WASHC2CQ9Y4E1 1318 aa11.12□□□□□ -0.63
SMPD3-210ENST00000567811 PLXNC1O60486 1568 aa11.12□□□□□ -0.63
SMPD3-210ENST00000567811 MROH2AA6NES4 1674 aa11.12□□□□□ -0.63
SMPD3-210ENST00000567811 CLTCQ00610 1675 aaKnown RBP11.12□□□□□ -0.63
SMPD3-210ENST00000567811 CFAP65Q6ZU64 1925 aaKnown RBP11.12□□□□□ -0.63
SMPD3-210ENST00000567811 UHRF1BP1Q6BDS2 1440 aa11.11□□□□□ -0.63
SMPD3-210ENST00000567811 RRP7BPQ9NSQ0 103 aa11.11□□□□□ -0.63
SMPD3-210ENST00000567811 ILDR1Q86SU0 546 aaPredicted RBP11.1□□□□□ -0.63
SMPD3-210ENST00000567811 NPATQ14207 1427 aa11.09□□□□□ -0.63
SMPD3-210ENST00000567811 PTPN23Q9H3S7 1636 aa11.09□□□□□ -0.63
SMPD3-210ENST00000567811 MAST1Q9Y2H9 1570 aa11.09□□□□□ -0.63
SMPD3-210ENST00000567811 FAM50AQ14320 339 aaKnown RBP11.09□□□□□ -0.63
SMPD3-210ENST00000567811 CHIC2Q9UKJ5 165 aa11.09□□□□□ -0.63
SMPD3-210ENST00000567811 ABCC5O15440 1437 aa11.09□□□□□ -0.63
SMPD3-210ENST00000567811 FBXO31Q5XUX0 539 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms