RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 RICTORQ6R327 1708 aa27.29■■□□□ 1.96
COMMD4-220ENST00000567720 ARHGAP5Q13017 1502 aa27.28■■□□□ 1.96
COMMD4-220ENST00000567720 AKNAQ7Z591 1439 aa27.23■■□□□ 1.95
COMMD4-220ENST00000567720 PHLDB1Q86UU1 1377 aa27.22■■□□□ 1.95
COMMD4-220ENST00000567720 GPATCH8Q9UKJ3 1502 aaKnown RBP27.21■■□□□ 1.95
COMMD4-220ENST00000567720 NCOA2Q15596 1464 aa27.21■■□□□ 1.95
COMMD4-220ENST00000567720 SAMD9LQ8IVG5 1584 aa27.2■■□□□ 1.94
COMMD4-220ENST00000567720 ABCC1P33527 1531 aa27.2■■□□□ 1.94
COMMD4-220ENST00000567720 ADGRL1O94910 1474 aa27.19■■□□□ 1.94
COMMD4-220ENST00000567720 KANK4Q5T7N3 995 aaPredicted RBP27.14■■□□□ 1.94
COMMD4-220ENST00000567720 DENND4BO75064 1496 aaPredicted RBP27.13■■□□□ 1.93
COMMD4-220ENST00000567720 CCNB3Q8WWL7 1395 aa27.13■■□□□ 1.93
COMMD4-220ENST00000567720 ZMYM4Q5VZL5 1548 aa27.13■■□□□ 1.93
COMMD4-220ENST00000567720 POGZQ7Z3K3 1410 aa27.12■■□□□ 1.93
COMMD4-220ENST00000567720 EFCAB2Q5VUJ9 269 aa27.1■■□□□ 1.93
COMMD4-220ENST00000567720 ARHGEF40Q8TER5 1519 aa27.09■■□□□ 1.93
COMMD4-220ENST00000567720 SYCP2Q9BX26 1530 aa27.09■■□□□ 1.93
COMMD4-220ENST00000567720 KDM5CP41229 1560 aa27.09■■□□□ 1.93
COMMD4-220ENST00000567720 SCAPERQ9BY12 1400 aa27.08■■□□□ 1.93
COMMD4-220ENST00000567720 ARHGEF12Q9NZN5 1544 aa27.08■■□□□ 1.93
COMMD4-220ENST00000567720 RAPGEF3O95398 923 aa27.05■■□□□ 1.92
COMMD4-220ENST00000567720 APLP2Q06481 763 aa27.05■■□□□ 1.92
COMMD4-220ENST00000567720 ZNF518AQ6AHZ1 1483 aa27.03■■□□□ 1.92
COMMD4-220ENST00000567720 HECW2Q9P2P5 1572 aa27.02■■□□□ 1.92
COMMD4-220ENST00000567720 CAMSAP2Q08AD1 1489 aa27■■□□□ 1.91
COMMD4-220ENST00000567720 ZFYVE16Q7Z3T8 1539 aa26.99■■□□□ 1.91
COMMD4-220ENST00000567720 PLEKHH2Q8IVE3 1493 aa26.99■■□□□ 1.91
COMMD4-220ENST00000567720 MYOM3Q5VTT5 1437 aa26.99■■□□□ 1.91
COMMD4-220ENST00000567720 TRAPPC8Q9Y2L5 1435 aa26.99■■□□□ 1.91
COMMD4-220ENST00000567720 CFDP1Q9UEE9 299 aaPredicted RBP26.98■■□□□ 1.91
COMMD4-220ENST00000567720 SIGLEC1Q9BZZ2 1709 aa26.96■■□□□ 1.91
COMMD4-220ENST00000567720 ABCA6Q8N139 1617 aa26.95■■□□□ 1.91
COMMD4-220ENST00000567720 ZNF777Q9ULD5 760 aaPredicted RBP26.95■■□□□ 1.9
COMMD4-220ENST00000567720 KIAA1107Q9UPP5 1409 aa26.95■■□□□ 1.9
COMMD4-220ENST00000567720 INO80Q9ULG1 1556 aaPredicted RBP26.95■■□□□ 1.9
COMMD4-220ENST00000567720 KIDINS220Q9ULH0 1771 aa26.94■■□□□ 1.9
COMMD4-220ENST00000567720 MAGI2Q86UL8 1455 aa26.93■■□□□ 1.9
COMMD4-220ENST00000567720 YEATS2Q9ULM3 1422 aa26.93■■□□□ 1.9
COMMD4-220ENST00000567720 PTPN23Q9H3S7 1636 aa26.92■■□□□ 1.9
COMMD4-220ENST00000567720 DIP2CQ9Y2E4 1556 aa26.92■■□□□ 1.9
COMMD4-220ENST00000567720 MBD5Q9P267 1494 aa26.91■■□□□ 1.9
COMMD4-220ENST00000567720 ZNF644Q9H582 1327 aaPredicted RBP26.9■■□□□ 1.9
COMMD4-220ENST00000567720 MIA2Q96PC5 1412 aa26.9■■□□□ 1.9
COMMD4-220ENST00000567720 ARHGEF5Q12774 1597 aa26.9■■□□□ 1.9
COMMD4-220ENST00000567720 MLH3Q9UHC1 1453 aa26.88■■□□□ 1.89
COMMD4-220ENST00000567720 CROCC2H7BZ55 1655 aa26.88■■□□□ 1.89
COMMD4-220ENST00000567720 ATP7AQ04656 1500 aa26.86■■□□□ 1.89
COMMD4-220ENST00000567720 FGD6Q6ZV73 1430 aa26.86■■□□□ 1.89
COMMD4-220ENST00000567720 AFAP1Q8N556 730 aa26.86■■□□□ 1.89
COMMD4-220ENST00000567720 CCDC141Q6ZP82 1450 aa26.85■■□□□ 1.89
COMMD4-220ENST00000567720 HNRNPMP52272 730 aaKnown RBP eCLIP26.83■■□□□ 1.89
COMMD4-220ENST00000567720 TCOF1Q13428 1488 aaKnown RBP26.82■■□□□ 1.88
COMMD4-220ENST00000567720 REREQ9P2R6 1566 aa26.82■■□□□ 1.88
COMMD4-220ENST00000567720 ADGBQ8N7X0 1667 aa26.82■■□□□ 1.88
COMMD4-220ENST00000567720 BCORL1Q5H9F3 1711 aa26.8■■□□□ 1.88
COMMD4-220ENST00000567720 C9orf84Q5VXU9 1444 aa26.79■■□□□ 1.88
COMMD4-220ENST00000567720 DNMT1P26358 1616 aaKnown RBP26.79■■□□□ 1.88
COMMD4-220ENST00000567720 MAST1Q9Y2H9 1570 aa26.77■■□□□ 1.88
COMMD4-220ENST00000567720 ATP10AO60312 1499 aa26.77■■□□□ 1.88
COMMD4-220ENST00000567720 PLXNC1O60486 1568 aa26.75■■□□□ 1.87
COMMD4-220ENST00000567720 ADAMTSL3P82987 1691 aa26.74■■□□□ 1.87
COMMD4-220ENST00000567720 PPARGC1BQ86YN6 1023 aaKnown RBP26.73■■□□□ 1.87
COMMD4-220ENST00000567720 SPAG9O60271 1321 aaKnown RBP26.72■■□□□ 1.87
COMMD4-220ENST00000567720 SHANK2Q9UPX8 1470 aa26.69■■□□□ 1.86
COMMD4-220ENST00000567720 MADDQ8WXG6 1647 aa26.69■■□□□ 1.86
COMMD4-220ENST00000567720 RTEL1-TNFRSF6BF6WH68 1400 aa26.69■■□□□ 1.86
COMMD4-220ENST00000567720 FER1L4A9Z1Z3 1794 aa26.67■■□□□ 1.86
COMMD4-220ENST00000567720 MYT1LQ9UL68 1186 aa26.67■■□□□ 1.86
COMMD4-220ENST00000567720 DAPK1P53355 1430 aa26.66■■□□□ 1.86
COMMD4-220ENST00000567720 AGLP35573 1532 aa26.66■■□□□ 1.86
COMMD4-220ENST00000567720 KDM4FA0A1W2PPD8 638 aa26.65■■□□□ 1.86
COMMD4-220ENST00000567720 ABCC5O15440 1437 aa26.65■■□□□ 1.86
COMMD4-220ENST00000567720 RIMS1Q86UR5 1692 aaKnown RBP26.63■■□□□ 1.85
COMMD4-220ENST00000567720 A2MP01023 1474 aa26.62■■□□□ 1.85
COMMD4-220ENST00000567720 RSPH4AQ5TD94 716 aa26.61■■□□□ 1.85
COMMD4-220ENST00000567720 ARID4BQ4LE39 1312 aaPredicted RBP26.59■■□□□ 1.85
COMMD4-220ENST00000567720 RRBP1Q9P2E9 1410 aaKnown RBP26.56■■□□□ 1.84
COMMD4-220ENST00000567720 EIF2AK4Q9P2K8 1649 aaKnown RBP26.54■■□□□ 1.84
COMMD4-220ENST00000567720 FAM50AQ14320 339 aaKnown RBP26.53■■□□□ 1.84
COMMD4-220ENST00000567720 ADGRL2O95490 1459 aa26.52■■□□□ 1.84
COMMD4-220ENST00000567720 TSPY4P0CV99 314 aa26.52■■□□□ 1.84
COMMD4-220ENST00000567720 TSPY10P0CW01 314 aa26.52■■□□□ 1.84
COMMD4-220ENST00000567720 RNF17Q9BXT8 1623 aaKnown RBP26.5■■□□□ 1.83
COMMD4-220ENST00000567720 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.5■■□□□ 1.83
COMMD4-220ENST00000567720 DUOX2Q9NRD8 1548 aa26.49■■□□□ 1.83
COMMD4-220ENST00000567720 PTPRKQ15262 1439 aa26.48■■□□□ 1.83
COMMD4-220ENST00000567720 DHX29Q7Z478 1369 aaKnown RBP26.48■■□□□ 1.83
COMMD4-220ENST00000567720 MLECQ14165 292 aa26.47■■□□□ 1.83
COMMD4-220ENST00000567720 PTPRMP28827 1452 aa26.47■■□□□ 1.83
COMMD4-220ENST00000567720 MROH2AA6NES4 1674 aa26.46■■□□□ 1.83
COMMD4-220ENST00000567720 CLTCQ00610 1675 aaKnown RBP26.46■■□□□ 1.83
COMMD4-220ENST00000567720 KIF15Q9NS87 1388 aa26.46■■□□□ 1.83
COMMD4-220ENST00000567720 MROH1Q8NDA8 1641 aa26.45■■□□□ 1.82
COMMD4-220ENST00000567720 C3P01024 1663 aa26.44■■□□□ 1.82
COMMD4-220ENST00000567720 DEPDC5O75140 1603 aa26.42■■□□□ 1.82
COMMD4-220ENST00000567720 NCOA1Q15788 1441 aa26.41■■□□□ 1.82
COMMD4-220ENST00000567720 ERBINQ96RT1 1412 aa26.4■■□□□ 1.82
COMMD4-220ENST00000567720 ANKRD30AQ9BXX3 1397 aa26.4■■□□□ 1.82
COMMD4-220ENST00000567720 CHIC2Q9UKJ5 165 aa26.39■■□□□ 1.82
COMMD4-220ENST00000567720 ZC3H13Q5T200 1668 aaKnown RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms