RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 EFCAB2Q5VUJ9 269 aa24.99■■□□□ 1.59
CDR2-206ENST00000567406 SIGLEC1Q9BZZ2 1709 aa24.99■■□□□ 1.59
CDR2-206ENST00000567406 ZFYVE16Q7Z3T8 1539 aa24.98■■□□□ 1.59
CDR2-206ENST00000567406 MLECQ14165 292 aa24.98■■□□□ 1.59
CDR2-206ENST00000567406 MYO5CQ9NQX4 1742 aa24.98■■□□□ 1.59
CDR2-206ENST00000567406 ZMYM4Q5VZL5 1548 aa24.97■■□□□ 1.59
CDR2-206ENST00000567406 POGZQ7Z3K3 1410 aa24.96■■□□□ 1.59
CDR2-206ENST00000567406 RIMS1Q86UR5 1692 aaKnown RBP24.94■■□□□ 1.58
CDR2-206ENST00000567406 PCF11O94913 1555 aaKnown RBP24.93■■□□□ 1.58
CDR2-206ENST00000567406 CLIP1P30622 1438 aa24.93■■□□□ 1.58
CDR2-206ENST00000567406 ARHGAP5Q13017 1502 aa24.91■■□□□ 1.58
CDR2-206ENST00000567406 MAGI2Q86UL8 1455 aa24.91■■□□□ 1.58
CDR2-206ENST00000567406 AFAP1Q8N556 730 aa24.91■■□□□ 1.58
CDR2-206ENST00000567406 CASKIN1Q8WXD9 1431 aa24.91■■□□□ 1.58
CDR2-206ENST00000567406 MYT1LQ9UL68 1186 aa24.87■■□□□ 1.57
CDR2-206ENST00000567406 ATP10AO60312 1499 aa24.85■■□□□ 1.57
CDR2-206ENST00000567406 CDC42BPBQ9Y5S2 1711 aa24.84■■□□□ 1.57
CDR2-206ENST00000567406 CCDC18Q5T9S5 1454 aa24.83■■□□□ 1.57
CDR2-206ENST00000567406 LMTK3Q96Q04 1460 aa24.83■■□□□ 1.56
CDR2-206ENST00000567406 C9orf84Q5VXU9 1444 aa24.81■■□□□ 1.56
CDR2-206ENST00000567406 HSPA2P54652 639 aa24.81■■□□□ 1.56
CDR2-206ENST00000567406 ZNF518AQ6AHZ1 1483 aa24.81■■□□□ 1.56
CDR2-206ENST00000567406 ARHGEF12Q9NZN5 1544 aa24.79■■□□□ 1.56
CDR2-206ENST00000567406 FYCO1Q9BQS8 1478 aa24.78■■□□□ 1.56
CDR2-206ENST00000567406 TRAPPC8Q9Y2L5 1435 aa24.78■■□□□ 1.56
CDR2-206ENST00000567406 FER1L4A9Z1Z3 1794 aa24.77■■□□□ 1.56
CDR2-206ENST00000567406 KDM5CP41229 1560 aa24.76■■□□□ 1.55
CDR2-206ENST00000567406 PREX2Q70Z35 1606 aa24.76■■□□□ 1.55
CDR2-206ENST00000567406 CEBPAP49715 358 aaPredicted RBP24.76■■□□□ 1.55
CDR2-206ENST00000567406 ZNF777Q9ULD5 760 aaPredicted RBP24.76■■□□□ 1.55
CDR2-206ENST00000567406 CDC42BPAQ5VT25 1732 aa24.73■■□□□ 1.55
CDR2-206ENST00000567406 ABCC1P33527 1531 aa24.72■■□□□ 1.55
CDR2-206ENST00000567406 DIP2CQ9Y2E4 1556 aa24.71■■□□□ 1.55
CDR2-206ENST00000567406 ABCA6Q8N139 1617 aa24.69■■□□□ 1.54
CDR2-206ENST00000567406 ITSN2Q9NZM3 1697 aa24.69■■□□□ 1.54
CDR2-206ENST00000567406 MLH3Q9UHC1 1453 aa24.68■■□□□ 1.54
CDR2-206ENST00000567406 HNRNPMP52272 730 aaKnown RBP eCLIP24.67■■□□□ 1.54
CDR2-206ENST00000567406 GPATCH8Q9UKJ3 1502 aaKnown RBP24.66■■□□□ 1.54
CDR2-206ENST00000567406 SAMD9LQ8IVG5 1584 aa24.63■■□□□ 1.53
CDR2-206ENST00000567406 KIDINS220Q9ULH0 1771 aa24.62■■□□□ 1.53
CDR2-206ENST00000567406 CFDP1Q9UEE9 299 aaPredicted RBP24.61■■□□□ 1.53
CDR2-206ENST00000567406 MTUS2Q5JR59 1369 aa24.61■■□□□ 1.53
CDR2-206ENST00000567406 SYCP2Q9BX26 1530 aa24.61■■□□□ 1.53
CDR2-206ENST00000567406 CCNB3Q8WWL7 1395 aa24.6■■□□□ 1.53
CDR2-206ENST00000567406 FBXO41Q8TF61 875 aa24.6■■□□□ 1.53
CDR2-206ENST00000567406 REREQ9P2R6 1566 aa24.59■■□□□ 1.53
CDR2-206ENST00000567406 CEP162Q5TB80 1403 aa24.58■■□□□ 1.53
CDR2-206ENST00000567406 SPAG9O60271 1321 aaKnown RBP24.58■■□□□ 1.52
CDR2-206ENST00000567406 ZNF644Q9H582 1327 aaPredicted RBP24.56■■□□□ 1.52
CDR2-206ENST00000567406 ESF1Q9H501 851 aaKnown RBP24.55■■□□□ 1.52
CDR2-206ENST00000567406 AGLP35573 1532 aa24.55■■□□□ 1.52
CDR2-206ENST00000567406 LOC105371045A0A1W2PR82 267 aa24.54■■□□□ 1.52
CDR2-206ENST00000567406 PREX1Q8TCU6 1659 aa24.53■■□□□ 1.52
CDR2-206ENST00000567406 C3P01024 1663 aa24.51■■□□□ 1.51
CDR2-206ENST00000567406 KIAA1107Q9UPP5 1409 aa24.49■■□□□ 1.51
CDR2-206ENST00000567406 TIAM1Q13009 1591 aa24.48■■□□□ 1.51
CDR2-206ENST00000567406 UHRF1BP1Q6BDS2 1440 aa24.48■■□□□ 1.51
CDR2-206ENST00000567406 SUPT6HQ7KZ85 1726 aaKnown RBP24.48■■□□□ 1.51
CDR2-206ENST00000567406 SETD1BQ9UPS6 1966 aaKnown RBP24.47■■□□□ 1.51
CDR2-206ENST00000567406 ATP7AQ04656 1500 aa24.46■■□□□ 1.51
CDR2-206ENST00000567406 PLEKHH2Q8IVE3 1493 aa24.46■■□□□ 1.51
CDR2-206ENST00000567406 EHBP1L1Q8N3D4 1523 aa24.45■■□□□ 1.51
CDR2-206ENST00000567406 STRCQ7RTU9 1775 aa24.43■■□□□ 1.5
CDR2-206ENST00000567406 INO80Q9ULG1 1556 aaPredicted RBP24.42■■□□□ 1.5
CDR2-206ENST00000567406 GGT6Q6P531 493 aa24.42■■□□□ 1.5
CDR2-206ENST00000567406 CERKQ8TCT0 537 aa24.42■■□□□ 1.5
CDR2-206ENST00000567406 A2MP01023 1474 aa24.42■■□□□ 1.5
CDR2-206ENST00000567406 CNTLNQ9NXG0 1405 aa24.4■■□□□ 1.5
CDR2-206ENST00000567406 ZMYM3Q14202 1370 aa24.4■■□□□ 1.5
CDR2-206ENST00000567406 MBD5Q9P267 1494 aa24.39■■□□□ 1.5
CDR2-206ENST00000567406 PLXNC1O60486 1568 aa24.37■■□□□ 1.49
CDR2-206ENST00000567406 NCOA2Q15596 1464 aa24.36■■□□□ 1.49
CDR2-206ENST00000567406 CLTCQ00610 1675 aaKnown RBP24.35■■□□□ 1.49
CDR2-206ENST00000567406 DMRT2Q9Y5R5 561 aa24.34■■□□□ 1.49
CDR2-206ENST00000567406 MROH2AA6NES4 1674 aa24.31■■□□□ 1.48
CDR2-206ENST00000567406 CAMSAP2Q08AD1 1489 aa24.3■■□□□ 1.48
CDR2-206ENST00000567406 ADGBQ8N7X0 1667 aa24.3■■□□□ 1.48
CDR2-206ENST00000567406 VPS8Q8N3P4 1428 aa24.29■■□□□ 1.48
CDR2-206ENST00000567406 KANK4Q5T7N3 995 aaPredicted RBP24.28■■□□□ 1.48
CDR2-206ENST00000567406 RTEL1-TNFRSF6BF6WH68 1400 aa24.27■■□□□ 1.48
CDR2-206ENST00000567406 NPATQ14207 1427 aa24.27■■□□□ 1.48
CDR2-206ENST00000567406 DHX29Q7Z478 1369 aaKnown RBP24.27■■□□□ 1.48
CDR2-206ENST00000567406 NCOA1Q15788 1441 aa24.26■■□□□ 1.47
CDR2-206ENST00000567406 CCDC141Q6ZP82 1450 aa24.26■■□□□ 1.47
CDR2-206ENST00000567406 KIF3BO15066 747 aa24.25■■□□□ 1.47
CDR2-206ENST00000567406 NCKAP5LQ9HCH0 1330 aa24.25■■□□□ 1.47
CDR2-206ENST00000567406 PTPRKQ15262 1439 aa24.25■■□□□ 1.47
CDR2-206ENST00000567406 LRRC9Q6ZRR7 1453 aa24.25■■□□□ 1.47
CDR2-206ENST00000567406 CAMSAP1Q5T5Y3 1602 aa24.24■■□□□ 1.47
CDR2-206ENST00000567406 PTPRTO14522 1441 aa24.24■■□□□ 1.47
CDR2-206ENST00000567406 PPP6R1Q9UPN7 881 aa24.2■■□□□ 1.46
CDR2-206ENST00000567406 TSPY4P0CV99 314 aa24.19■■□□□ 1.46
CDR2-206ENST00000567406 TSPY10P0CW01 314 aa24.19■■□□□ 1.46
CDR2-206ENST00000567406 RSPH4AQ5TD94 716 aa24.19■■□□□ 1.46
CDR2-206ENST00000567406 FBXO31Q5XUX0 539 aaPredicted RBP24.19■■□□□ 1.46
CDR2-206ENST00000567406 MYO3AQ8NEV4 1616 aa24.18■■□□□ 1.46
CDR2-206ENST00000567406 ARHGEF5Q12774 1597 aa24.14■■□□□ 1.45
CDR2-206ENST00000567406 CEP170BQ9Y4F5 1589 aaPredicted RBP24.14■■□□□ 1.45
CDR2-206ENST00000567406 WASHC2CQ9Y4E1 1318 aa24.13■■□□□ 1.45
CDR2-206ENST00000567406 LTBP4Q8N2S1 1624 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms