RNA–Protein interactions for RNA: ENST00000567339.1

GGA2-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 3

Gene GGA2, Length 293 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-210ENST00000567339 ARHGAP5Q13017 1502 aa15.4■□□□□ 0.06
GGA2-210ENST00000567339 GPATCH8Q9UKJ3 1502 aaKnown RBP15.4■□□□□ 0.06
GGA2-210ENST00000567339 AKNAQ7Z591 1439 aa15.39■□□□□ 0.05
GGA2-210ENST00000567339 KANK4Q5T7N3 995 aaPredicted RBP15.38■□□□□ 0.05
GGA2-210ENST00000567339 ITSN2Q9NZM3 1697 aa15.38■□□□□ 0.05
GGA2-210ENST00000567339 ADGRL1O94910 1474 aa15.36■□□□□ 0.05
GGA2-210ENST00000567339 PLEKHH2Q8IVE3 1493 aa15.36■□□□□ 0.05
GGA2-210ENST00000567339 CFDP1Q9UEE9 299 aaPredicted RBP15.36■□□□□ 0.05
GGA2-210ENST00000567339 CDC42BPAQ5VT25 1732 aa15.36■□□□□ 0.05
GGA2-210ENST00000567339 CDC42BPBQ9Y5S2 1711 aa15.34■□□□□ 0.05
GGA2-210ENST00000567339 DENND4BO75064 1496 aaPredicted RBP15.34■□□□□ 0.05
GGA2-210ENST00000567339 COL17A1Q9UMD9 1497 aaPredicted RBP15.33■□□□□ 0.05
GGA2-210ENST00000567339 MIA2Q96PC5 1412 aa15.33■□□□□ 0.04
GGA2-210ENST00000567339 KIAA1107Q9UPP5 1409 aa15.33■□□□□ 0.04
GGA2-210ENST00000567339 MYOM3Q5VTT5 1437 aa15.32■□□□□ 0.04
GGA2-210ENST00000567339 POGZQ7Z3K3 1410 aa15.32■□□□□ 0.04
GGA2-210ENST00000567339 SCAPERQ9BY12 1400 aa15.32■□□□□ 0.04
GGA2-210ENST00000567339 ABCC1P33527 1531 aa15.32■□□□□ 0.04
GGA2-210ENST00000567339 ZNF518AQ6AHZ1 1483 aa15.31■□□□□ 0.04
GGA2-210ENST00000567339 SAMD9LQ8IVG5 1584 aa15.28■□□□□ 0.04
GGA2-210ENST00000567339 ZMYM4Q5VZL5 1548 aa15.28■□□□□ 0.04
GGA2-210ENST00000567339 MAGI2Q86UL8 1455 aa15.28■□□□□ 0.04
GGA2-210ENST00000567339 ZNF777Q9ULD5 760 aaPredicted RBP15.28■□□□□ 0.04
GGA2-210ENST00000567339 RICTORQ6R327 1708 aa15.27■□□□□ 0.04
GGA2-210ENST00000567339 RAPGEF3O95398 923 aa15.27■□□□□ 0.04
GGA2-210ENST00000567339 FRMPD1Q5SYB0 1578 aa15.27■□□□□ 0.03
GGA2-210ENST00000567339 RSPH4AQ5TD94 716 aa15.26■□□□□ 0.03
GGA2-210ENST00000567339 CAMSAP2Q08AD1 1489 aa15.26■□□□□ 0.03
GGA2-210ENST00000567339 KDM5CP41229 1560 aa15.25■□□□□ 0.03
GGA2-210ENST00000567339 SYCP2Q9BX26 1530 aa15.25■□□□□ 0.03
GGA2-210ENST00000567339 FGD6Q6ZV73 1430 aa15.24■□□□□ 0.03
GGA2-210ENST00000567339 ARHGEF12Q9NZN5 1544 aa15.22■□□□□ 0.03
GGA2-210ENST00000567339 MBD5Q9P267 1494 aa15.22■□□□□ 0.03
GGA2-210ENST00000567339 MLH3Q9UHC1 1453 aa15.22■□□□□ 0.03
GGA2-210ENST00000567339 TRAPPC8Q9Y2L5 1435 aa15.22■□□□□ 0.03
GGA2-210ENST00000567339 ARHGEF5Q12774 1597 aa15.21■□□□□ 0.03
GGA2-210ENST00000567339 ARHGEF40Q8TER5 1519 aa15.21■□□□□ 0.03
GGA2-210ENST00000567339 TCOF1Q13428 1488 aaKnown RBP15.2■□□□□ 0.02
GGA2-210ENST00000567339 CCDC141Q6ZP82 1450 aa15.2■□□□□ 0.02
GGA2-210ENST00000567339 ZNF644Q9H582 1327 aaPredicted RBP15.2■□□□□ 0.02
GGA2-210ENST00000567339 HECW2Q9P2P5 1572 aa15.2■□□□□ 0.02
GGA2-210ENST00000567339 AFAP1Q8N556 730 aa15.2■□□□□ 0.02
GGA2-210ENST00000567339 ZFYVE16Q7Z3T8 1539 aa15.2■□□□□ 0.02
GGA2-210ENST00000567339 PTPN23Q9H3S7 1636 aa15.19■□□□□ 0.02
GGA2-210ENST00000567339 HNRNPMP52272 730 aaKnown RBP eCLIP15.19■□□□□ 0.021e-16■■□□□ 13.2
GGA2-210ENST00000567339 SPAG9O60271 1321 aaKnown RBP15.17■□□□□ 0.02
GGA2-210ENST00000567339 RTEL1-TNFRSF6BF6WH68 1400 aa15.17■□□□□ 0.02
GGA2-210ENST00000567339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.16■□□□□ 0.02
GGA2-210ENST00000567339 TSPY4P0CV99 314 aa15.15■□□□□ 0.02
GGA2-210ENST00000567339 TSPY10P0CW01 314 aa15.15■□□□□ 0.02
GGA2-210ENST00000567339 ATP7AQ04656 1500 aa15.15■□□□□ 0.02
GGA2-210ENST00000567339 ATP10AO60312 1499 aa15.14■□□□□ 0.01
GGA2-210ENST00000567339 SHANK2Q9UPX8 1470 aa15.14■□□□□ 0.01
GGA2-210ENST00000567339 MYT1LQ9UL68 1186 aa15.14■□□□□ 0.01
GGA2-210ENST00000567339 C9orf84Q5VXU9 1444 aa15.14■□□□□ 0.01
GGA2-210ENST00000567339 YEATS2Q9ULM3 1422 aa15.14■□□□□ 0.01
GGA2-210ENST00000567339 INO80Q9ULG1 1556 aaPredicted RBP15.14■□□□□ 0.01
GGA2-210ENST00000567339 REREQ9P2R6 1566 aa15.13■□□□□ 0.01
GGA2-210ENST00000567339 RRBP1Q9P2E9 1410 aaKnown RBP15.12■□□□□ 0.01
GGA2-210ENST00000567339 DIP2CQ9Y2E4 1556 aa15.11■□□□□ 0.01
GGA2-210ENST00000567339 MAST1Q9Y2H9 1570 aa15.11■□□□□ 0.01
GGA2-210ENST00000567339 KIDINS220Q9ULH0 1771 aa15.11■□□□□ 0.01
GGA2-210ENST00000567339 DNMT1P26358 1616 aaKnown RBP15.11■□□□□ 0.01
GGA2-210ENST00000567339 PPARGC1BQ86YN6 1023 aaKnown RBP15.11■□□□□ 0.01
GGA2-210ENST00000567339 ABCC5O15440 1437 aa15.1■□□□□ 0.01
GGA2-210ENST00000567339 DAPK1P53355 1430 aa15.1■□□□□ 0.01
GGA2-210ENST00000567339 FAM50AQ14320 339 aaKnown RBP15.1■□□□□ 0.01
GGA2-210ENST00000567339 ABCA6Q8N139 1617 aa15.09■□□□□ 0.01
GGA2-210ENST00000567339 AGLP35573 1532 aa15.07■□□□□ 0
GGA2-210ENST00000567339 CROCC2H7BZ55 1655 aa15.07■□□□□ 0
GGA2-210ENST00000567339 PLXNC1O60486 1568 aa15.07■□□□□ 0
GGA2-210ENST00000567339 A2MP01023 1474 aa15.06■□□□□ 0
GGA2-210ENST00000567339 ADGBQ8N7X0 1667 aa15.06■□□□□ 0
GGA2-210ENST00000567339 ARID4BQ4LE39 1312 aaPredicted RBP15.05■□□□□ -0
GGA2-210ENST00000567339 ANKRD30AQ9BXX3 1397 aa15.05■□□□□ -0
GGA2-210ENST00000567339 ADGRL2O95490 1459 aa15.04■□□□□ -0
GGA2-210ENST00000567339 DHX29Q7Z478 1369 aaKnown RBP15.04■□□□□ -0
GGA2-210ENST00000567339 ROCK1Q13464 1354 aa15.02■□□□□ -0
GGA2-210ENST00000567339 DUOX2Q9NRD8 1548 aa15.02□□□□□ -0.01
GGA2-210ENST00000567339 NCOA1Q15788 1441 aa15.01□□□□□ -0.01
GGA2-210ENST00000567339 KIF15Q9NS87 1388 aa15.01□□□□□ -0.01
GGA2-210ENST00000567339 BCORL1Q5H9F3 1711 aa15□□□□□ -0.01
GGA2-210ENST00000567339 ERBINQ96RT1 1412 aa15□□□□□ -0.01
GGA2-210ENST00000567339 PPP6R1Q9UPN7 881 aa14.99□□□□□ -0.01
GGA2-210ENST00000567339 FAM135AQ9P2D6 1515 aa14.97□□□□□ -0.01
GGA2-210ENST00000567339 EIF2AK4Q9P2K8 1649 aaKnown RBP14.97□□□□□ -0.01
GGA2-210ENST00000567339 SIGLEC1Q9BZZ2 1709 aa14.97□□□□□ -0.01
GGA2-210ENST00000567339 ADAMTSL3P82987 1691 aa14.97□□□□□ -0.01
GGA2-210ENST00000567339 PTPRKQ15262 1439 aa14.96□□□□□ -0.01
GGA2-210ENST00000567339 CHIC2Q9UKJ5 165 aa14.96□□□□□ -0.01
GGA2-210ENST00000567339 CNTLNQ9NXG0 1405 aa14.95□□□□□ -0.02
GGA2-210ENST00000567339 KDM4FA0A1W2PPD8 638 aa14.95□□□□□ -0.02
GGA2-210ENST00000567339 RRP7BPQ9NSQ0 103 aa14.95□□□□□ -0.02
GGA2-210ENST00000567339 KIF3BO15066 747 aa14.93□□□□□ -0.02
GGA2-210ENST00000567339 ESF1Q9H501 851 aaKnown RBP14.93□□□□□ -0.02
GGA2-210ENST00000567339 ANKRD50Q9ULJ7 1429 aa14.92□□□□□ -0.02
GGA2-210ENST00000567339 RNF17Q9BXT8 1623 aaKnown RBP14.92□□□□□ -0.02
GGA2-210ENST00000567339 ITGAEP38570 1179 aa14.92□□□□□ -0.02
GGA2-210ENST00000567339 MLECQ14165 292 aa14.92□□□□□ -0.02
GGA2-210ENST00000567339 MADDQ8WXG6 1647 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms