RNA–Protein interactions for RNA: ENST00000566901.5

CFDP1-207, Transcript of craniofacial development protein 1, humanhuman

TSL 1 (best)

Gene CFDP1, Length 1,167 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-207ENST00000566901 PHLDB1Q86UU1 1377 aa19.15■□□□□ 0.66
CFDP1-207ENST00000566901 KIF14Q15058 1648 aa19.13■□□□□ 0.65
CFDP1-207ENST00000566901 MYOM3Q5VTT5 1437 aa19.12■□□□□ 0.65
CFDP1-207ENST00000566901 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.12■□□□□ 0.65
CFDP1-207ENST00000566901 PCGF6Q9BYE7 350 aa19.12■□□□□ 0.65
CFDP1-207ENST00000566901 CCNB3Q8WWL7 1395 aa19.11■□□□□ 0.65
CFDP1-207ENST00000566901 COL17A1Q9UMD9 1497 aaPredicted RBP19.1■□□□□ 0.65
CFDP1-207ENST00000566901 PLEKHD1A6NEE1 506 aa19.1■□□□□ 0.65
CFDP1-207ENST00000566901 ARID3CA6NKF2 412 aa19.1■□□□□ 0.65
CFDP1-207ENST00000566901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.1■□□□□ 0.65
CFDP1-207ENST00000566901 HNRNPUL2Q1KMD3 747 aaKnown RBP19.1■□□□□ 0.65
CFDP1-207ENST00000566901 FGD6Q6ZV73 1430 aa19.09■□□□□ 0.65
CFDP1-207ENST00000566901 KCNH8Q96L42 1107 aa19.08■□□□□ 0.64
CFDP1-207ENST00000566901 MIA2Q96PC5 1412 aa19.08■□□□□ 0.64
CFDP1-207ENST00000566901 ITSN2Q9NZM3 1697 aa19.07■□□□□ 0.64
CFDP1-207ENST00000566901 CD109Q6YHK3 1445 aa19.05■□□□□ 0.64
CFDP1-207ENST00000566901 TCOF1Q13428 1488 aaKnown RBP19.04■□□□□ 0.64
CFDP1-207ENST00000566901 PTPN23Q9H3S7 1636 aa19.01■□□□□ 0.63
CFDP1-207ENST00000566901 GPATCH8Q9UKJ3 1502 aaKnown RBP19■□□□□ 0.63
CFDP1-207ENST00000566901 HECW2Q9P2P5 1572 aa18.99■□□□□ 0.63
CFDP1-207ENST00000566901 CDC42BPAQ5VT25 1732 aa18.98■□□□□ 0.63
CFDP1-207ENST00000566901 PREX2Q70Z35 1606 aa18.97■□□□□ 0.63
CFDP1-207ENST00000566901 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.97■□□□□ 0.63
CFDP1-207ENST00000566901 TTC37Q6PGP7 1564 aa18.96■□□□□ 0.63
CFDP1-207ENST00000566901 ARAP3Q8WWN8 1544 aa18.95■□□□□ 0.62
CFDP1-207ENST00000566901 MYO5CQ9NQX4 1742 aa18.93■□□□□ 0.62
CFDP1-207ENST00000566901 ABCA9Q8IUA7 1624 aa18.92■□□□□ 0.62
CFDP1-207ENST00000566901 ILDR1Q86SU0 546 aaPredicted RBP18.92■□□□□ 0.62
CFDP1-207ENST00000566901 CAMSAP2Q08AD1 1489 aa18.89■□□□□ 0.61
CFDP1-207ENST00000566901 CDC42BPBQ9Y5S2 1711 aa18.88■□□□□ 0.61
CFDP1-207ENST00000566901 FAM50AQ14320 339 aaKnown RBP18.88■□□□□ 0.61
CFDP1-207ENST00000566901 CFDP1Q9UEE9 299 aaPredicted RBP18.88■□□□□ 0.61
CFDP1-207ENST00000566901 PLCH2O75038 1416 aa18.87■□□□□ 0.61
CFDP1-207ENST00000566901 DNMT1P26358 1616 aaKnown RBP18.87■□□□□ 0.61
CFDP1-207ENST00000566901 PLEKHH2Q8IVE3 1493 aa18.85■□□□□ 0.61
CFDP1-207ENST00000566901 AKNAQ7Z591 1439 aa18.84■□□□□ 0.61
CFDP1-207ENST00000566901 ARHGEF5Q12774 1597 aa18.84■□□□□ 0.61
CFDP1-207ENST00000566901 ARHGAP5Q13017 1502 aa18.84■□□□□ 0.61
CFDP1-207ENST00000566901 SAMD9LQ8IVG5 1584 aa18.82■□□□□ 0.6
CFDP1-207ENST00000566901 SHANK2Q9UPX8 1470 aa18.81■□□□□ 0.6
CFDP1-207ENST00000566901 CROCC2H7BZ55 1655 aa18.81■□□□□ 0.6
CFDP1-207ENST00000566901 DAPK1P53355 1430 aa18.81■□□□□ 0.6
CFDP1-207ENST00000566901 KIAA1107Q9UPP5 1409 aa18.81■□□□□ 0.6
CFDP1-207ENST00000566901 CNKSR2Q8WXI2 1034 aa18.79■□□□□ 0.6
CFDP1-207ENST00000566901 PTPRKQ15262 1439 aa18.79■□□□□ 0.6
CFDP1-207ENST00000566901 CFAP74Q9C0B2 1584 aa18.78■□□□□ 0.6
CFDP1-207ENST00000566901 ABCC5O15440 1437 aa18.78■□□□□ 0.6
CFDP1-207ENST00000566901 ROCK1Q13464 1354 aa18.78■□□□□ 0.6
CFDP1-207ENST00000566901 NEO1Q92859 1461 aa18.77■□□□□ 0.6
CFDP1-207ENST00000566901 ARID4BQ4LE39 1312 aaPredicted RBP18.77■□□□□ 0.6
CFDP1-207ENST00000566901 HFM1A2PYH4 1435 aa18.77■□□□□ 0.6
CFDP1-207ENST00000566901 RAPGEF3O95398 923 aa18.77■□□□□ 0.6
CFDP1-207ENST00000566901 ABCC1P33527 1531 aa18.77■□□□□ 0.6
CFDP1-207ENST00000566901 MBD5Q9P267 1494 aa18.77■□□□□ 0.59
CFDP1-207ENST00000566901 EFCAB2Q5VUJ9 269 aa18.76■□□□□ 0.59
CFDP1-207ENST00000566901 ADGRL2O95490 1459 aa18.76■□□□□ 0.59
CFDP1-207ENST00000566901 ZNF644Q9H582 1327 aaPredicted RBP18.75■□□□□ 0.59
CFDP1-207ENST00000566901 RSPH4AQ5TD94 716 aa18.75■□□□□ 0.59
CFDP1-207ENST00000566901 CCDC141Q6ZP82 1450 aa18.75■□□□□ 0.59
CFDP1-207ENST00000566901 ADGBQ8N7X0 1667 aa18.75■□□□□ 0.59
CFDP1-207ENST00000566901 ADAMTSL3P82987 1691 aa18.74■□□□□ 0.59
CFDP1-207ENST00000566901 GCC2Q8IWJ2 1684 aa18.74■□□□□ 0.59
CFDP1-207ENST00000566901 SYCP2Q9BX26 1530 aa18.74■□□□□ 0.59
CFDP1-207ENST00000566901 SETD5Q9C0A6 1442 aa18.74■□□□□ 0.59
CFDP1-207ENST00000566901 FRMPD1Q5SYB0 1578 aa18.73■□□□□ 0.59
CFDP1-207ENST00000566901 MAST1Q9Y2H9 1570 aa18.73■□□□□ 0.59
CFDP1-207ENST00000566901 FANCAO15360 1455 aa18.73■□□□□ 0.59
CFDP1-207ENST00000566901 ITGAEP38570 1179 aa18.73■□□□□ 0.59
CFDP1-207ENST00000566901 BCORL1Q5H9F3 1711 aa18.72■□□□□ 0.59
CFDP1-207ENST00000566901 HRCP23327 699 aa18.72■□□□□ 0.59
CFDP1-207ENST00000566901 PTPRMP28827 1452 aa18.71■□□□□ 0.59
CFDP1-207ENST00000566901 MADDQ8WXG6 1647 aa18.71■□□□□ 0.59
CFDP1-207ENST00000566901 ZNF777Q9ULD5 760 aaPredicted RBP18.71■□□□□ 0.59
CFDP1-207ENST00000566901 ARHGEF40Q8TER5 1519 aa18.7■□□□□ 0.58
CFDP1-207ENST00000566901 NAIPQ13075 1403 aa18.7■□□□□ 0.58
CFDP1-207ENST00000566901 RIMS1Q86UR5 1692 aaKnown RBP18.69■□□□□ 0.58
CFDP1-207ENST00000566901 C9orf84Q5VXU9 1444 aa18.68■□□□□ 0.58
CFDP1-207ENST00000566901 DENND4BO75064 1496 aaPredicted RBP18.67■□□□□ 0.58
CFDP1-207ENST00000566901 RICTORQ6R327 1708 aa18.67■□□□□ 0.58
CFDP1-207ENST00000566901 HOXD11P31277 338 aaPredicted RBP18.67■□□□□ 0.58
CFDP1-207ENST00000566901 ARHGEF12Q9NZN5 1544 aa18.67■□□□□ 0.58
CFDP1-207ENST00000566901 RAB3GAP2Q9H2M9 1393 aa18.67■□□□□ 0.58
CFDP1-207ENST00000566901 ACIN1Q9UKV3 1341 aaKnown RBP18.66■□□□□ 0.58
CFDP1-207ENST00000566901 NCOA1Q15788 1441 aa18.66■□□□□ 0.58
CFDP1-207ENST00000566901 ANKRD30AQ9BXX3 1397 aa18.65■□□□□ 0.58
CFDP1-207ENST00000566901 PLXNC1O60486 1568 aa18.64■□□□□ 0.58
CFDP1-207ENST00000566901 TSPY4P0CV99 314 aa18.62■□□□□ 0.57
CFDP1-207ENST00000566901 TSPY10P0CW01 314 aa18.62■□□□□ 0.57
CFDP1-207ENST00000566901 HNRNPMP52272 730 aaKnown RBP eCLIP18.62■□□□□ 0.57
CFDP1-207ENST00000566901 RTEL1-TNFRSF6BF6WH68 1400 aa18.62■□□□□ 0.57
CFDP1-207ENST00000566901 ZFYVE16Q7Z3T8 1539 aa18.6■□□□□ 0.57
CFDP1-207ENST00000566901 TRAPPC8Q9Y2L5 1435 aa18.6■□□□□ 0.57
CFDP1-207ENST00000566901 ZNF518AQ6AHZ1 1483 aa18.59■□□□□ 0.57
CFDP1-207ENST00000566901 SCAPERQ9BY12 1400 aa18.59■□□□□ 0.57
CFDP1-207ENST00000566901 INO80Q9ULG1 1556 aaPredicted RBP18.59■□□□□ 0.57
CFDP1-207ENST00000566901 POGZQ7Z3K3 1410 aa18.58■□□□□ 0.57
CFDP1-207ENST00000566901 CHIC2Q9UKJ5 165 aa18.58■□□□□ 0.56
CFDP1-207ENST00000566901 KDM5CP41229 1560 aa18.58■□□□□ 0.56
CFDP1-207ENST00000566901 ZMYM4Q5VZL5 1548 aa18.57■□□□□ 0.56
CFDP1-207ENST00000566901 FER1L4A9Z1Z3 1794 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms