RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 MYO5CQ9NQX4 1742 aa19.49■□□□□ 0.71
UBR1-206ENST00000566493 EFCAB2Q5VUJ9 269 aa19.49■□□□□ 0.71
UBR1-206ENST00000566493 ZMYM4Q5VZL5 1548 aa19.48■□□□□ 0.71
UBR1-206ENST00000566493 CLIP1P30622 1438 aa19.48■□□□□ 0.71
UBR1-206ENST00000566493 SCAPERQ9BY12 1400 aa19.48■□□□□ 0.71
UBR1-206ENST00000566493 KIF14Q15058 1648 aa19.47■□□□□ 0.71
UBR1-206ENST00000566493 MAGI2Q86UL8 1455 aa19.47■□□□□ 0.71
UBR1-206ENST00000566493 ZFYVE16Q7Z3T8 1539 aa19.46■□□□□ 0.71
UBR1-206ENST00000566493 TROQ12816 1431 aaPredicted RBP19.46■□□□□ 0.71
UBR1-206ENST00000566493 MADDQ8WXG6 1647 aa19.46■□□□□ 0.71
UBR1-206ENST00000566493 POGZQ7Z3K3 1410 aa19.45■□□□□ 0.7
UBR1-206ENST00000566493 LRRIQ1Q96JM4 1722 aa19.43■□□□□ 0.7
UBR1-206ENST00000566493 YEATS2Q9ULM3 1422 aa19.42■□□□□ 0.7
UBR1-206ENST00000566493 ARHGAP5Q13017 1502 aa19.41■□□□□ 0.7
UBR1-206ENST00000566493 CASKIN1Q8WXD9 1431 aa19.41■□□□□ 0.7
UBR1-206ENST00000566493 CCDC18Q5T9S5 1454 aa19.41■□□□□ 0.7
UBR1-206ENST00000566493 RIMS1Q86UR5 1692 aaKnown RBP19.4■□□□□ 0.7
UBR1-206ENST00000566493 ILDR1Q86SU0 546 aaPredicted RBP19.39■□□□□ 0.69
UBR1-206ENST00000566493 PCF11O94913 1555 aaKnown RBP19.39■□□□□ 0.69
UBR1-206ENST00000566493 MLECQ14165 292 aa19.38■□□□□ 0.69
UBR1-206ENST00000566493 MYT1LQ9UL68 1186 aa19.37■□□□□ 0.69
UBR1-206ENST00000566493 ATP10AO60312 1499 aa19.36■□□□□ 0.69
UBR1-206ENST00000566493 ZNF518AQ6AHZ1 1483 aa19.35■□□□□ 0.69
UBR1-206ENST00000566493 SIGLEC1Q9BZZ2 1709 aa19.34■□□□□ 0.69
UBR1-206ENST00000566493 FYCO1Q9BQS8 1478 aa19.34■□□□□ 0.69
UBR1-206ENST00000566493 CDC42BPBQ9Y5S2 1711 aa19.34■□□□□ 0.69
UBR1-206ENST00000566493 C9orf84Q5VXU9 1444 aa19.34■□□□□ 0.69
UBR1-206ENST00000566493 AFAP1Q8N556 730 aa19.33■□□□□ 0.68
UBR1-206ENST00000566493 FER1L4A9Z1Z3 1794 aa19.32■□□□□ 0.68
UBR1-206ENST00000566493 POTEDQ86YR6 584 aa19.31■□□□□ 0.68
UBR1-206ENST00000566493 PREX2Q70Z35 1606 aa19.31■□□□□ 0.68
UBR1-206ENST00000566493 KDM5CP41229 1560 aa19.29■□□□□ 0.68
UBR1-206ENST00000566493 LMTK3Q96Q04 1460 aa19.28■□□□□ 0.68
UBR1-206ENST00000566493 ARHGEF12Q9NZN5 1544 aa19.25■□□□□ 0.67
UBR1-206ENST00000566493 CDC42BPAQ5VT25 1732 aa19.25■□□□□ 0.67
UBR1-206ENST00000566493 ABCC1P33527 1531 aa19.25■□□□□ 0.67
UBR1-206ENST00000566493 MLH3Q9UHC1 1453 aa19.24■□□□□ 0.67
UBR1-206ENST00000566493 ITSN2Q9NZM3 1697 aa19.24■□□□□ 0.67
UBR1-206ENST00000566493 ZNF777Q9ULD5 760 aaPredicted RBP19.23■□□□□ 0.67
UBR1-206ENST00000566493 TRAPPC8Q9Y2L5 1435 aa19.23■□□□□ 0.67
UBR1-206ENST00000566493 DIP2CQ9Y2E4 1556 aa19.23■□□□□ 0.67
UBR1-206ENST00000566493 HSPA2P54652 639 aa19.21■□□□□ 0.67
UBR1-206ENST00000566493 REREQ9P2R6 1566 aa19.2■□□□□ 0.66
UBR1-206ENST00000566493 ABCA6Q8N139 1617 aa19.2■□□□□ 0.66
UBR1-206ENST00000566493 ESF1Q9H501 851 aaKnown RBP19.19■□□□□ 0.66
UBR1-206ENST00000566493 GPATCH8Q9UKJ3 1502 aaKnown RBP19.18■□□□□ 0.66
UBR1-206ENST00000566493 MTUS2Q5JR59 1369 aa19.18■□□□□ 0.66
UBR1-206ENST00000566493 CEBPAP49715 358 aaPredicted RBP19.17■□□□□ 0.66
UBR1-206ENST00000566493 CFDP1Q9UEE9 299 aaPredicted RBP19.17■□□□□ 0.66
UBR1-206ENST00000566493 CCNB3Q8WWL7 1395 aa19.17■□□□□ 0.66
UBR1-206ENST00000566493 SAMD9LQ8IVG5 1584 aa19.15■□□□□ 0.66
UBR1-206ENST00000566493 PREX1Q8TCU6 1659 aa19.15■□□□□ 0.66
UBR1-206ENST00000566493 KIDINS220Q9ULH0 1771 aa19.15■□□□□ 0.66
UBR1-206ENST00000566493 HNRNPMP52272 730 aaKnown RBP eCLIP19.15■□□□□ 0.66
UBR1-206ENST00000566493 FBXO41Q8TF61 875 aa19.15■□□□□ 0.66
UBR1-206ENST00000566493 AGLP35573 1532 aa19.15■□□□□ 0.66
UBR1-206ENST00000566493 SPAG9O60271 1321 aaKnown RBP19.14■□□□□ 0.65
UBR1-206ENST00000566493 SYCP2Q9BX26 1530 aa19.14■□□□□ 0.65
UBR1-206ENST00000566493 PLEKHH2Q8IVE3 1493 aa19.13■□□□□ 0.65
UBR1-206ENST00000566493 CEP162Q5TB80 1403 aa19.12■□□□□ 0.65
UBR1-206ENST00000566493 KIAA1107Q9UPP5 1409 aa19.11■□□□□ 0.65
UBR1-206ENST00000566493 SETD1BQ9UPS6 1966 aaKnown RBP19.1■□□□□ 0.65
UBR1-206ENST00000566493 EHBP1L1Q8N3D4 1523 aa19.09■□□□□ 0.65
UBR1-206ENST00000566493 UHRF1BP1Q6BDS2 1440 aa19.08■□□□□ 0.65
UBR1-206ENST00000566493 C3P01024 1663 aa19.08■□□□□ 0.65
UBR1-206ENST00000566493 CNTLNQ9NXG0 1405 aa19.07■□□□□ 0.64
UBR1-206ENST00000566493 ATP7AQ04656 1500 aa19.06■□□□□ 0.64
UBR1-206ENST00000566493 SUPT6HQ7KZ85 1726 aaKnown RBP19.05■□□□□ 0.64
UBR1-206ENST00000566493 TIAM1Q13009 1591 aa19.04■□□□□ 0.64
UBR1-206ENST00000566493 DMRT2Q9Y5R5 561 aa19.04■□□□□ 0.64
UBR1-206ENST00000566493 INO80Q9ULG1 1556 aaPredicted RBP19.02■□□□□ 0.64
UBR1-206ENST00000566493 A2MP01023 1474 aa19.02■□□□□ 0.63
UBR1-206ENST00000566493 ZNF644Q9H582 1327 aaPredicted RBP19.01■□□□□ 0.63
UBR1-206ENST00000566493 MROH2AA6NES4 1674 aa18.99■□□□□ 0.63
UBR1-206ENST00000566493 CERKQ8TCT0 537 aa18.99■□□□□ 0.63
UBR1-206ENST00000566493 ADGBQ8N7X0 1667 aa18.98■□□□□ 0.63
UBR1-206ENST00000566493 STRCQ7RTU9 1775 aa18.98■□□□□ 0.63
UBR1-206ENST00000566493 PLXNC1O60486 1568 aa18.98■□□□□ 0.63
UBR1-206ENST00000566493 ZMYM3Q14202 1370 aa18.97■□□□□ 0.63
UBR1-206ENST00000566493 GGT6Q6P531 493 aa18.97■□□□□ 0.63
UBR1-206ENST00000566493 NCOA2Q15596 1464 aa18.97■□□□□ 0.63
UBR1-206ENST00000566493 LOC105371045A0A1W2PR82 267 aa18.96■□□□□ 0.63
UBR1-206ENST00000566493 MBD5Q9P267 1494 aa18.96■□□□□ 0.63
UBR1-206ENST00000566493 CLTCQ00610 1675 aaKnown RBP18.95■□□□□ 0.62
UBR1-206ENST00000566493 NPATQ14207 1427 aa18.95■□□□□ 0.62
UBR1-206ENST00000566493 RTEL1-TNFRSF6BF6WH68 1400 aa18.94■□□□□ 0.62
UBR1-206ENST00000566493 MAPK8IP2Q13387 824 aaPredicted RBP18.93■□□□□ 0.62
UBR1-206ENST00000566493 RSPH4AQ5TD94 716 aa18.93■□□□□ 0.62
UBR1-206ENST00000566493 VPS8Q8N3P4 1428 aa18.92■□□□□ 0.62
UBR1-206ENST00000566493 PTPRTO14522 1441 aa18.91■□□□□ 0.62
UBR1-206ENST00000566493 CAMSAP2Q08AD1 1489 aa18.9■□□□□ 0.62
UBR1-206ENST00000566493 CCDC141Q6ZP82 1450 aa18.9■□□□□ 0.62
UBR1-206ENST00000566493 DHX29Q7Z478 1369 aaKnown RBP18.9■□□□□ 0.62
UBR1-206ENST00000566493 LRRC9Q6ZRR7 1453 aa18.88■□□□□ 0.61
UBR1-206ENST00000566493 TSPY4P0CV99 314 aa18.87■□□□□ 0.61
UBR1-206ENST00000566493 TSPY10P0CW01 314 aa18.87■□□□□ 0.61
UBR1-206ENST00000566493 NCOA1Q15788 1441 aa18.87■□□□□ 0.61
UBR1-206ENST00000566493 CAMSAP1Q5T5Y3 1602 aa18.86■□□□□ 0.61
UBR1-206ENST00000566493 KIF3BO15066 747 aa18.86■□□□□ 0.61
UBR1-206ENST00000566493 PTPRKQ15262 1439 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms