RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-231ENST00000566279 ARHGAP5Q13017 1502 aa15.26■□□□□ 0.03
TCF4-231ENST00000566279 FANCAO15360 1455 aa15.25■□□□□ 0.03
TCF4-231ENST00000566279 PLCH2O75038 1416 aa15.25■□□□□ 0.03
TCF4-231ENST00000566279 GPATCH8Q9UKJ3 1502 aaKnown RBP15.25■□□□□ 0.03
TCF4-231ENST00000566279 TEX14Q8IWB6 1497 aa15.24■□□□□ 0.03
TCF4-231ENST00000566279 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
TCF4-231ENST00000566279 COL17A1Q9UMD9 1497 aaPredicted RBP15.23■□□□□ 0.03
TCF4-231ENST00000566279 KDM6BO15054 1643 aa15.22■□□□□ 0.03
TCF4-231ENST00000566279 ZNF777Q9ULD5 760 aaPredicted RBP15.22■□□□□ 0.03
TCF4-231ENST00000566279 ITSN2Q9NZM3 1697 aa15.22■□□□□ 0.03
TCF4-231ENST00000566279 PHLDB1Q86UU1 1377 aa15.21■□□□□ 0.03
TCF4-231ENST00000566279 SAMD9LQ8IVG5 1584 aa15.2■□□□□ 0.02
TCF4-231ENST00000566279 ZNF644Q9H582 1327 aaPredicted RBP15.2■□□□□ 0.02
TCF4-231ENST00000566279 AKNAQ7Z591 1439 aa15.19■□□□□ 0.02
TCF4-231ENST00000566279 CFAP74Q9C0B2 1584 aa15.19■□□□□ 0.02
TCF4-231ENST00000566279 NEO1Q92859 1461 aa15.18■□□□□ 0.02
TCF4-231ENST00000566279 CFDP1Q9UEE9 299 aaPredicted RBP15.18■□□□□ 0.02
TCF4-231ENST00000566279 ARAP3Q8WWN8 1544 aa15.18■□□□□ 0.02
TCF4-231ENST00000566279 ADGRL1O94910 1474 aa15.18■□□□□ 0.02
TCF4-231ENST00000566279 RAPGEF3O95398 923 aa15.17■□□□□ 0.02
TCF4-231ENST00000566279 EFCAB2Q5VUJ9 269 aa15.17■□□□□ 0.02
TCF4-231ENST00000566279 MYOM3Q5VTT5 1437 aa15.16■□□□□ 0.02
TCF4-231ENST00000566279 ARHGEF12Q9NZN5 1544 aa15.16■□□□□ 0.02
TCF4-231ENST00000566279 ABCC1P33527 1531 aa15.15■□□□□ 0.02
TCF4-231ENST00000566279 SYCP2Q9BX26 1530 aa15.15■□□□□ 0.02
TCF4-231ENST00000566279 FRMPD1Q5SYB0 1578 aa15.15■□□□□ 0.02
TCF4-231ENST00000566279 SCAPERQ9BY12 1400 aa15.14■□□□□ 0.01
TCF4-231ENST00000566279 RICTORQ6R327 1708 aa15.14■□□□□ 0.01
TCF4-231ENST00000566279 CAMSAP2Q08AD1 1489 aa15.13■□□□□ 0.01
TCF4-231ENST00000566279 HNRNPMP52272 730 aaKnown RBP eCLIP15.13■□□□□ 0.017e-6■■■□□ 17
TCF4-231ENST00000566279 DENND4BO75064 1496 aaPredicted RBP15.11■□□□□ 0.01
TCF4-231ENST00000566279 TRAPPC8Q9Y2L5 1435 aa15.11■□□□□ 0.01
TCF4-231ENST00000566279 PTPN23Q9H3S7 1636 aa15.11■□□□□ 0.01
TCF4-231ENST00000566279 FGD6Q6ZV73 1430 aa15.11■□□□□ 0.01
TCF4-231ENST00000566279 AFAP1Q8N556 730 aa15.1■□□□□ 0.01
TCF4-231ENST00000566279 POGZQ7Z3K3 1410 aa15.1■□□□□ 0.01
TCF4-231ENST00000566279 MIA2Q96PC5 1412 aa15.07■□□□□ 0
TCF4-231ENST00000566279 MBD5Q9P267 1494 aa15.07■□□□□ 0
TCF4-231ENST00000566279 DHX57Q6P158 1386 aaKnown RBP15.06■□□□□ 0
TCF4-231ENST00000566279 FAM50AQ14320 339 aaKnown RBP15.05■□□□□ 0
TCF4-231ENST00000566279 ZNF518AQ6AHZ1 1483 aa15.05■□□□□ -0
TCF4-231ENST00000566279 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.05■□□□□ -0
TCF4-231ENST00000566279 ITGAEP38570 1179 aa15.05■□□□□ -0
TCF4-231ENST00000566279 KDM5CP41229 1560 aa15.04■□□□□ -0
TCF4-231ENST00000566279 YEATS2Q9ULM3 1422 aa15.04■□□□□ -0
TCF4-231ENST00000566279 KIAA1107Q9UPP5 1409 aa15.04■□□□□ -0
TCF4-231ENST00000566279 PLEKHH2Q8IVE3 1493 aa15.04■□□□□ -0
TCF4-231ENST00000566279 TCOF1Q13428 1488 aaKnown RBP15.03■□□□□ -0
TCF4-231ENST00000566279 MYT1LQ9UL68 1186 aa15.03■□□□□ -0
TCF4-231ENST00000566279 ZMYM4Q5VZL5 1548 aa15.02■□□□□ -0
TCF4-231ENST00000566279 HECW2Q9P2P5 1572 aa15.02■□□□□ -0
TCF4-231ENST00000566279 KIDINS220Q9ULH0 1771 aa15.02□□□□□ -0.01
TCF4-231ENST00000566279 CCDC141Q6ZP82 1450 aa15.01□□□□□ -0.01
TCF4-231ENST00000566279 ARHGEF5Q12774 1597 aa15□□□□□ -0.01
TCF4-231ENST00000566279 ABCA6Q8N139 1617 aa15□□□□□ -0.01
TCF4-231ENST00000566279 SIGLEC1Q9BZZ2 1709 aa15□□□□□ -0.01
TCF4-231ENST00000566279 CLSPNQ9HAW4 1339 aa15□□□□□ -0.01
TCF4-231ENST00000566279 ZFYVE16Q7Z3T8 1539 aa15□□□□□ -0.01
TCF4-231ENST00000566279 DNMT1P26358 1616 aaKnown RBP15□□□□□ -0.01
TCF4-231ENST00000566279 CROCC2H7BZ55 1655 aa15□□□□□ -0.01
TCF4-231ENST00000566279 INO80Q9ULG1 1556 aaPredicted RBP14.99□□□□□ -0.01
TCF4-231ENST00000566279 ARHGEF40Q8TER5 1519 aa14.99□□□□□ -0.01
TCF4-231ENST00000566279 RAB3GAP2Q9H2M9 1393 aa14.99□□□□□ -0.01
TCF4-231ENST00000566279 ATP7AQ04656 1500 aa14.98□□□□□ -0.01
TCF4-231ENST00000566279 SPAG9O60271 1321 aaKnown RBP14.98□□□□□ -0.01
TCF4-231ENST00000566279 ABCC5O15440 1437 aa14.98□□□□□ -0.01
TCF4-231ENST00000566279 DAPK1P53355 1430 aa14.98□□□□□ -0.01
TCF4-231ENST00000566279 SETD5Q9C0A6 1442 aa14.98□□□□□ -0.01
TCF4-231ENST00000566279 DIP2CQ9Y2E4 1556 aa14.97□□□□□ -0.01
TCF4-231ENST00000566279 CHIC2Q9UKJ5 165 aa14.96□□□□□ -0.01
TCF4-231ENST00000566279 MLH3Q9UHC1 1453 aa14.96□□□□□ -0.01
TCF4-231ENST00000566279 PTPRKQ15262 1439 aa14.95□□□□□ -0.02
TCF4-231ENST00000566279 C9orf84Q5VXU9 1444 aa14.95□□□□□ -0.02
TCF4-231ENST00000566279 ADGBQ8N7X0 1667 aa14.94□□□□□ -0.02
TCF4-231ENST00000566279 MAGI2Q86UL8 1455 aa14.94□□□□□ -0.02
TCF4-231ENST00000566279 TSPY4P0CV99 314 aa14.93□□□□□ -0.02
TCF4-231ENST00000566279 TSPY10P0CW01 314 aa14.93□□□□□ -0.02
TCF4-231ENST00000566279 MAST1Q9Y2H9 1570 aa14.92□□□□□ -0.02
TCF4-231ENST00000566279 RSPH4AQ5TD94 716 aa14.9□□□□□ -0.02
TCF4-231ENST00000566279 ATP10AO60312 1499 aa14.9□□□□□ -0.02
TCF4-231ENST00000566279 SHANK2Q9UPX8 1470 aa14.9□□□□□ -0.02
TCF4-231ENST00000566279 RRP7BPQ9NSQ0 103 aa14.89□□□□□ -0.03
TCF4-231ENST00000566279 RTEL1-TNFRSF6BF6WH68 1400 aa14.89□□□□□ -0.03
TCF4-231ENST00000566279 ARID4BQ4LE39 1312 aaPredicted RBP14.88□□□□□ -0.03
TCF4-231ENST00000566279 PLXNC1O60486 1568 aa14.88□□□□□ -0.03
TCF4-231ENST00000566279 MLECQ14165 292 aa14.87□□□□□ -0.03
TCF4-231ENST00000566279 A2MP01023 1474 aa14.87□□□□□ -0.03
TCF4-231ENST00000566279 HFM1A2PYH4 1435 aa14.87□□□□□ -0.03
TCF4-231ENST00000566279 KIF15Q9NS87 1388 aa14.85□□□□□ -0.03
TCF4-231ENST00000566279 NCOA1Q15788 1441 aa14.84□□□□□ -0.03
TCF4-231ENST00000566279 REREQ9P2R6 1566 aa14.84□□□□□ -0.03
TCF4-231ENST00000566279 ADGRL2O95490 1459 aa14.84□□□□□ -0.03
TCF4-231ENST00000566279 BCORL1Q5H9F3 1711 aa14.83□□□□□ -0.04
TCF4-231ENST00000566279 ANKRD30AQ9BXX3 1397 aa14.83□□□□□ -0.04
TCF4-231ENST00000566279 ZNF316A6NFI3 1004 aaPredicted RBP14.83□□□□□ -0.04
TCF4-231ENST00000566279 NAIPQ13075 1403 aa14.82□□□□□ -0.04
TCF4-231ENST00000566279 DHX29Q7Z478 1369 aaKnown RBP14.82□□□□□ -0.04
TCF4-231ENST00000566279 DUOX2Q9NRD8 1548 aa14.81□□□□□ -0.04
TCF4-231ENST00000566279 GCC2Q8IWJ2 1684 aa14.8□□□□□ -0.04
TCF4-231ENST00000566279 MADDQ8WXG6 1647 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms