RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 CABP2Q9NPB3 220 aa10.59□□□□□ -0.71
CNOT1-209ENST00000566240 SLAIN1Q8ND83 568 aa10.57□□□□□ -0.72
CNOT1-209ENST00000566240 PHF8Q9UPP1 1060 aa10.56□□□□□ -0.72
CNOT1-209ENST00000566240 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.54□□□□□ -0.72
CNOT1-209ENST00000566240 LMOD2Q6P5Q4 547 aa10.53□□□□□ -0.72
CNOT1-209ENST00000566240 ARHGEF1Q92888 912 aaKnown RBP10.52□□□□□ -0.73
CNOT1-209ENST00000566240 E2F4Q16254 413 aa10.51□□□□□ -0.73
CNOT1-209ENST00000566240 OCEL1Q9H607 264 aa10.51□□□□□ -0.73
CNOT1-209ENST00000566240 TULP1O00294 542 aaPredicted RBP10.48□□□□□ -0.73
CNOT1-209ENST00000566240 ST18O60284 1047 aa10.48□□□□□ -0.73
CNOT1-209ENST00000566240 CDAN1Q8IWY9 1227 aa10.45□□□□□ -0.74
CNOT1-209ENST00000566240 NCKAP5LQ9HCH0 1330 aa10.44□□□□□ -0.74
CNOT1-209ENST00000566240 PDE4AP27815 886 aa10.44□□□□□ -0.74
CNOT1-209ENST00000566240 PDCD7Q8N8D1 485 aaKnown RBP10.44□□□□□ -0.74
CNOT1-209ENST00000566240 MS4A4AQ96JQ5 239 aa10.44□□□□□ -0.74
CNOT1-209ENST00000566240 LARP6Q9BRS8 491 aaKnown RBP10.43□□□□□ -0.74
CNOT1-209ENST00000566240 GOLGA2Q08379 1002 aa10.42□□□□□ -0.74
CNOT1-209ENST00000566240 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.42□□□□□ -0.74
CNOT1-209ENST00000566240 SEMA3EO15041 775 aa10.41□□□□□ -0.74
CNOT1-209ENST00000566240 TMEM132AQ24JP5 1023 aa10.41□□□□□ -0.74
CNOT1-209ENST00000566240 GTF3C3Q9Y5Q9 886 aa10.41□□□□□ -0.74
CNOT1-209ENST00000566240 TESPA1A2RU30 521 aaPredicted RBP10.4□□□□□ -0.74
CNOT1-209ENST00000566240 MFSD10Q14728 455 aa10.39□□□□□ -0.75
CNOT1-209ENST00000566240 MKRN3Q13064 507 aaKnown RBP10.38□□□□□ -0.75
CNOT1-209ENST00000566240 ZC3H15Q8WU90 426 aaKnown RBP10.38□□□□□ -0.75
CNOT1-209ENST00000566240 CRISPLD2Q9H0B8 497 aa10.38□□□□□ -0.75
CNOT1-209ENST00000566240 DDX27Q96GQ7 796 aaKnown RBP10.36□□□□□ -0.75
CNOT1-209ENST00000566240 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.35□□□□□ -0.751e-11■■□□□ 11.9
CNOT1-209ENST00000566240 C3orf67Q6ZVT6 689 aa10.34□□□□□ -0.75
CNOT1-209ENST00000566240 TMEM121BQ9BXQ6 578 aaPredicted RBP10.34□□□□□ -0.75
CNOT1-209ENST00000566240 ARIH1Q9Y4X5 557 aaPredicted RBP10.34□□□□□ -0.75
CNOT1-209ENST00000566240 SNPHO15079 494 aa10.33□□□□□ -0.76
CNOT1-209ENST00000566240 SMYD5Q6GMV2 418 aa10.33□□□□□ -0.76
CNOT1-209ENST00000566240 MARVELD3Q96A59 401 aa10.32□□□□□ -0.76
CNOT1-209ENST00000566240 L3MBTL3Q96JM7 780 aaPredicted RBP10.32□□□□□ -0.76
CNOT1-209ENST00000566240 TIMELESSQ9UNS1 1208 aa10.32□□□□□ -0.76
CNOT1-209ENST00000566240 CAMK2BQ13554 666 aa10.31□□□□□ -0.76
CNOT1-209ENST00000566240 BRPF1P55201 1214 aaPredicted RBP10.29□□□□□ -0.76
CNOT1-209ENST00000566240 ILDR1Q86SU0 546 aaPredicted RBP10.29□□□□□ -0.76
CNOT1-209ENST00000566240 DPY19L2Q6NUT2 758 aa10.28□□□□□ -0.76
CNOT1-209ENST00000566240 SLC24A3Q9HC58 644 aa10.27□□□□□ -0.77
CNOT1-209ENST00000566240 ERICH6Q7L0X2 663 aa10.26□□□□□ -0.77
CNOT1-209ENST00000566240 GPHNQ9NQX3 736 aaPredicted RBP10.25□□□□□ -0.77
CNOT1-209ENST00000566240 ZMYND10O75800 440 aa10.24□□□□□ -0.77
CNOT1-209ENST00000566240 PPP1R15BQ5SWA1 713 aa10.23□□□□□ -0.77
CNOT1-209ENST00000566240 EMP3P54852 163 aa10.22□□□□□ -0.77
CNOT1-209ENST00000566240 NEUROD2Q15784 382 aa10.22□□□□□ -0.77
CNOT1-209ENST00000566240 SPNS2Q8IVW8 549 aa10.2□□□□□ -0.78
CNOT1-209ENST00000566240 BOLA1Q9Y3E2 137 aa10.2□□□□□ -0.78
CNOT1-209ENST00000566240 MMRN1Q13201 1228 aa10.19□□□□□ -0.78
CNOT1-209ENST00000566240 BARGINQ6ZT62 677 aa10.19□□□□□ -0.78
CNOT1-209ENST00000566240 MLLT3P42568 568 aaPredicted RBP10.18□□□□□ -0.78
CNOT1-209ENST00000566240 RBM26Q5T8P6 1007 aaKnown RBP10.17□□□□□ -0.78
CNOT1-209ENST00000566240 POTEB3A0JP26 581 aa10.16□□□□□ -0.78
CNOT1-209ENST00000566240 G3V3G9 751 aa10.16□□□□□ -0.78
CNOT1-209ENST00000566240 DSG2Q14126 1118 aa10.16□□□□□ -0.78
CNOT1-209ENST00000566240 POTEBQ6S5H4 581 aa10.16□□□□□ -0.78
CNOT1-209ENST00000566240 DPYSL4O14531 572 aa10.15□□□□□ -0.78
CNOT1-209ENST00000566240 MICALL2Q8IY33 904 aa10.15□□□□□ -0.78
CNOT1-209ENST00000566240 HS3ST6Q96QI5 342 aa10.15□□□□□ -0.78
CNOT1-209ENST00000566240 EMILIN3Q9NT22 766 aa10.15□□□□□ -0.78
CNOT1-209ENST00000566240 FAM205CA6NFA0 338 aa10.14□□□□□ -0.79
CNOT1-209ENST00000566240 SPDYE16A6NNV3 312 aaPredicted RBP10.14□□□□□ -0.79
CNOT1-209ENST00000566240 HOXB3P14651 431 aaPredicted RBP10.14□□□□□ -0.79
CNOT1-209ENST00000566240 GPIHBP1Q8IV16 184 aa10.14□□□□□ -0.79
CNOT1-209ENST00000566240 TMC2Q8TDI7 906 aa10.14□□□□□ -0.79
CNOT1-209ENST00000566240 KRTAP3-3Q9BYR6 98 aa10.13□□□□□ -0.79
CNOT1-209ENST00000566240 KRTAP3-2Q9BYR7 98 aa10.13□□□□□ -0.79
CNOT1-209ENST00000566240 FOXK1P85037 733 aa10.12□□□□□ -0.79
CNOT1-209ENST00000566240 PDIA6Q15084 440 aa10.11□□□□□ -0.79
CNOT1-209ENST00000566240 C14orf37Q86TY3 774 aa10.11□□□□□ -0.79
CNOT1-209ENST00000566240 AK7Q96M32 723 aa10.11□□□□□ -0.79
CNOT1-209ENST00000566240 KRI1Q8N9T8 703 aaKnown RBP10.1□□□□□ -0.79
CNOT1-209ENST00000566240 PLPP6Q8IY26 295 aa10.07□□□□□ -0.8
CNOT1-209ENST00000566240 C2orf72A6NCS6 295 aa10.05□□□□□ -0.8
CNOT1-209ENST00000566240 KIF3CO14782 793 aa10.04□□□□□ -0.8
CNOT1-209ENST00000566240 HOXB1P14653 301 aaPredicted RBP10.04□□□□□ -0.8
CNOT1-209ENST00000566240 TMEM92Q6UXU6 159 aa10.04□□□□□ -0.8
CNOT1-209ENST00000566240 ZNF710Q8N1W2 664 aa10.04□□□□□ -0.8
CNOT1-209ENST00000566240 DOK7Q18PE1 504 aa10.03□□□□□ -0.8
CNOT1-209ENST00000566240 MAP3K9P80192 1104 aa10.02□□□□□ -0.81
CNOT1-209ENST00000566240 TRIM66O15016 1216 aa10.01□□□□□ -0.81
CNOT1-209ENST00000566240 GPBP1L1Q9HC44 474 aaPredicted RBP10.01□□□□□ -0.81
CNOT1-209ENST00000566240 DAXXQ9UER7 740 aaPredicted RBP10□□□□□ -0.81
CNOT1-209ENST00000566240 GRXCR2A6NFK2 248 aa9.99□□□□□ -0.81
CNOT1-209ENST00000566240 GPR37O15354 613 aa9.98□□□□□ -0.81
CNOT1-209ENST00000566240 PDE4DQ08499 809 aa9.98□□□□□ -0.81
CNOT1-209ENST00000566240 KDM4CQ9H3R0 1056 aa9.98□□□□□ -0.81
CNOT1-209ENST00000566240 IL27Q8NEV9 243 aa9.97□□□□□ -0.81
CNOT1-209ENST00000566240 ERBB3P21860 1342 aa9.97□□□□□ -0.81
CNOT1-209ENST00000566240 NUTM2FA1L443 756 aa9.96□□□□□ -0.82
CNOT1-209ENST00000566240 RIMBP2O15034 1052 aa9.96□□□□□ -0.82
CNOT1-209ENST00000566240 UPF1Q92900 1129 aaKnown RBP eCLIP9.96□□□□□ -0.82
CNOT1-209ENST00000566240 MINK1Q8N4C8 1332 aaPredicted RBP9.94□□□□□ -0.82
CNOT1-209ENST00000566240 VARS2Q5ST30 1063 aaKnown RBP9.94□□□□□ -0.82
CNOT1-209ENST00000566240 OXER1Q8TDS5 423 aa9.94□□□□□ -0.82
CNOT1-209ENST00000566240 OSBPP22059 807 aa9.93□□□□□ -0.82
CNOT1-209ENST00000566240 PTGER2P43116 358 aa9.93□□□□□ -0.82
CNOT1-209ENST00000566240 ARXQ96QS3 562 aa9.92□□□□□ -0.82
CNOT1-209ENST00000566240 TBC1D12O60347 775 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms