RNA–Protein interactions for RNA: ENST00000566197.1

BBS4-209, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-209ENST00000566197 AKNAQ7Z591 1439 aa13.3□□□□□ -0.28
BBS4-209ENST00000566197 CDC42BPAQ5VT25 1732 aa13.3□□□□□ -0.28
BBS4-209ENST00000566197 DENND4BO75064 1496 aaPredicted RBP13.29□□□□□ -0.28
BBS4-209ENST00000566197 PREX2Q70Z35 1606 aa13.29□□□□□ -0.28
BBS4-209ENST00000566197 PLCH2O75038 1416 aa13.29□□□□□ -0.28
BBS4-209ENST00000566197 CEP162Q5TB80 1403 aa13.29□□□□□ -0.28
BBS4-209ENST00000566197 ARHGEF40Q8TER5 1519 aa13.29□□□□□ -0.28
BBS4-209ENST00000566197 ZMYM4Q5VZL5 1548 aa13.28□□□□□ -0.28
BBS4-209ENST00000566197 RAPGEF3O95398 923 aa13.27□□□□□ -0.29
BBS4-209ENST00000566197 ARHGAP5Q13017 1502 aa13.26□□□□□ -0.29
BBS4-209ENST00000566197 CERKQ8TCT0 537 aa13.25□□□□□ -0.29
BBS4-209ENST00000566197 BCORL1Q5H9F3 1711 aa13.24□□□□□ -0.29
BBS4-209ENST00000566197 EFCAB2Q5VUJ9 269 aa13.23□□□□□ -0.29
BBS4-209ENST00000566197 ITSN2Q9NZM3 1697 aa13.23□□□□□ -0.29
BBS4-209ENST00000566197 POGZQ7Z3K3 1410 aa13.22□□□□□ -0.29
BBS4-209ENST00000566197 ADAMTSL3P82987 1691 aa13.22□□□□□ -0.29
BBS4-209ENST00000566197 ZFYVE16Q7Z3T8 1539 aa13.22□□□□□ -0.29
BBS4-209ENST00000566197 MAGI2Q86UL8 1455 aa13.22□□□□□ -0.29
BBS4-209ENST00000566197 SCAPERQ9BY12 1400 aa13.22□□□□□ -0.29
BBS4-209ENST00000566197 ABCC1P33527 1531 aa13.19□□□□□ -0.3
BBS4-209ENST00000566197 EHBP1L1Q8N3D4 1523 aa13.19□□□□□ -0.3
BBS4-209ENST00000566197 KDM5CP41229 1560 aa13.19□□□□□ -0.3
BBS4-209ENST00000566197 SIGLEC1Q9BZZ2 1709 aa13.19□□□□□ -0.3
BBS4-209ENST00000566197 ZNF518AQ6AHZ1 1483 aa13.18□□□□□ -0.3
BBS4-209ENST00000566197 LOC105371045A0A1W2PR82 267 aa13.18□□□□□ -0.3
BBS4-209ENST00000566197 MTUS2Q5JR59 1369 aa13.17□□□□□ -0.3
BBS4-209ENST00000566197 MADDQ8WXG6 1647 aa13.17□□□□□ -0.3
BBS4-209ENST00000566197 SUPT6HQ7KZ85 1726 aaKnown RBP13.16□□□□□ -0.3
BBS4-209ENST00000566197 SAMD9LQ8IVG5 1584 aa13.16□□□□□ -0.3
BBS4-209ENST00000566197 RIMS1Q86UR5 1692 aaKnown RBP13.15□□□□□ -0.3
BBS4-209ENST00000566197 YEATS2Q9ULM3 1422 aa13.15□□□□□ -0.3
BBS4-209ENST00000566197 FER1L4A9Z1Z3 1794 aa13.15□□□□□ -0.3
BBS4-209ENST00000566197 TIAM1Q13009 1591 aa13.15□□□□□ -0.3
BBS4-209ENST00000566197 GPATCH8Q9UKJ3 1502 aaKnown RBP13.14□□□□□ -0.31
BBS4-209ENST00000566197 ARID4BQ4LE39 1312 aaPredicted RBP13.13□□□□□ -0.31
BBS4-209ENST00000566197 VPS8Q8N3P4 1428 aa13.13□□□□□ -0.31
BBS4-209ENST00000566197 ABCA6Q8N139 1617 aa13.13□□□□□ -0.31
BBS4-209ENST00000566197 KIDINS220Q9ULH0 1771 aa13.13□□□□□ -0.31
BBS4-209ENST00000566197 ARHGEF12Q9NZN5 1544 aa13.13□□□□□ -0.31
BBS4-209ENST00000566197 DIP2CQ9Y2E4 1556 aa13.12□□□□□ -0.31
BBS4-209ENST00000566197 ATP10AO60312 1499 aa13.12□□□□□ -0.31
BBS4-209ENST00000566197 C9orf84Q5VXU9 1444 aa13.12□□□□□ -0.31
BBS4-209ENST00000566197 REREQ9P2R6 1566 aa13.11□□□□□ -0.31
BBS4-209ENST00000566197 PTPRMP28827 1452 aa13.11□□□□□ -0.31
BBS4-209ENST00000566197 CCNB3Q8WWL7 1395 aa13.11□□□□□ -0.31
BBS4-209ENST00000566197 SYCP2Q9BX26 1530 aa13.11□□□□□ -0.31
BBS4-209ENST00000566197 PLEKHH2Q8IVE3 1493 aa13.1□□□□□ -0.31
BBS4-209ENST00000566197 MLH3Q9UHC1 1453 aa13.1□□□□□ -0.31
BBS4-209ENST00000566197 TRAPPC8Q9Y2L5 1435 aa13.1□□□□□ -0.31
BBS4-209ENST00000566197 AFAP1Q8N556 730 aa13.09□□□□□ -0.31
BBS4-209ENST00000566197 MAP3K1Q13233 1512 aa13.08□□□□□ -0.32
BBS4-209ENST00000566197 CFDP1Q9UEE9 299 aaPredicted RBP13.07□□□□□ -0.32
BBS4-209ENST00000566197 MYT1LQ9UL68 1186 aa13.07□□□□□ -0.32
BBS4-209ENST00000566197 ZNF777Q9ULD5 760 aaPredicted RBP13.07□□□□□ -0.32
BBS4-209ENST00000566197 NCOA2Q15596 1464 aa13.07□□□□□ -0.32
BBS4-209ENST00000566197 INO80Q9ULG1 1556 aaPredicted RBP13.07□□□□□ -0.32
BBS4-209ENST00000566197 KIAA1107Q9UPP5 1409 aa13.06□□□□□ -0.32
BBS4-209ENST00000566197 ADGBQ8N7X0 1667 aa13.05□□□□□ -0.32
BBS4-209ENST00000566197 LRRC9Q6ZRR7 1453 aa13.05□□□□□ -0.32
BBS4-209ENST00000566197 ATP7AQ04656 1500 aa13.05□□□□□ -0.32
BBS4-209ENST00000566197 AGLP35573 1532 aa13.03□□□□□ -0.32
BBS4-209ENST00000566197 HNRNPMP52272 730 aaKnown RBP eCLIP13.02□□□□□ -0.33
BBS4-209ENST00000566197 MLECQ14165 292 aa13.02□□□□□ -0.33
BBS4-209ENST00000566197 SPAG9O60271 1321 aaKnown RBP13.01□□□□□ -0.33
BBS4-209ENST00000566197 CAMSAP2Q08AD1 1489 aa13.01□□□□□ -0.33
BBS4-209ENST00000566197 SETD1BQ9UPS6 1966 aaKnown RBP13.01□□□□□ -0.33
BBS4-209ENST00000566197 PREX1Q8TCU6 1659 aa13□□□□□ -0.33
BBS4-209ENST00000566197 C3P01024 1663 aa12.99□□□□□ -0.33
BBS4-209ENST00000566197 PLXNC1O60486 1568 aa12.99□□□□□ -0.33
BBS4-209ENST00000566197 ARHGEF5Q12774 1597 aa12.99□□□□□ -0.33
BBS4-209ENST00000566197 MBD5Q9P267 1494 aa12.99□□□□□ -0.33
BBS4-209ENST00000566197 MROH2AA6NES4 1674 aa12.99□□□□□ -0.33
BBS4-209ENST00000566197 ZNF644Q9H582 1327 aaPredicted RBP12.98□□□□□ -0.33
BBS4-209ENST00000566197 CCDC141Q6ZP82 1450 aa12.97□□□□□ -0.33
BBS4-209ENST00000566197 HSPA2P54652 639 aa12.96□□□□□ -0.33
BBS4-209ENST00000566197 APLP2Q06481 763 aa12.96□□□□□ -0.33
BBS4-209ENST00000566197 A2MP01023 1474 aa12.96□□□□□ -0.34
BBS4-209ENST00000566197 RTEL1-TNFRSF6BF6WH68 1400 aa12.96□□□□□ -0.34
BBS4-209ENST00000566197 KANK4Q5T7N3 995 aaPredicted RBP12.95□□□□□ -0.34
BBS4-209ENST00000566197 CLTCQ00610 1675 aaKnown RBP12.95□□□□□ -0.34
BBS4-209ENST00000566197 MYOM3Q5VTT5 1437 aa12.94□□□□□ -0.34
BBS4-209ENST00000566197 CROCC2H7BZ55 1655 aa12.93□□□□□ -0.34
BBS4-209ENST00000566197 RSPH4AQ5TD94 716 aa12.93□□□□□ -0.34
BBS4-209ENST00000566197 PLPPR3Q6T4P5 718 aa12.93□□□□□ -0.34
BBS4-209ENST00000566197 MIA2Q96PC5 1412 aa12.93□□□□□ -0.34
BBS4-209ENST00000566197 CNTLNQ9NXG0 1405 aa12.93□□□□□ -0.34
BBS4-209ENST00000566197 MAST1Q9Y2H9 1570 aa12.93□□□□□ -0.34
BBS4-209ENST00000566197 PTPN23Q9H3S7 1636 aa12.92□□□□□ -0.34
BBS4-209ENST00000566197 ESF1Q9H501 851 aaKnown RBP12.91□□□□□ -0.34
BBS4-209ENST00000566197 DHX29Q7Z478 1369 aaKnown RBP12.88□□□□□ -0.35
BBS4-209ENST00000566197 EIF2AK4Q9P2K8 1649 aaKnown RBP12.88□□□□□ -0.35
BBS4-209ENST00000566197 TSPY4P0CV99 314 aa12.87□□□□□ -0.35
BBS4-209ENST00000566197 TSPY10P0CW01 314 aa12.87□□□□□ -0.35
BBS4-209ENST00000566197 CEBPAP49715 358 aaPredicted RBP12.87□□□□□ -0.35
BBS4-209ENST00000566197 DNMT1P26358 1616 aaKnown RBP12.87□□□□□ -0.35
BBS4-209ENST00000566197 FAM135AQ9P2D6 1515 aa12.87□□□□□ -0.35
BBS4-209ENST00000566197 UHRF1BP1Q6BDS2 1440 aa12.86□□□□□ -0.35
BBS4-209ENST00000566197 RNF17Q9BXT8 1623 aaKnown RBP12.85□□□□□ -0.35
BBS4-209ENST00000566197 STRCQ7RTU9 1775 aa12.85□□□□□ -0.35
BBS4-209ENST00000566197 FGD6Q6ZV73 1430 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms