RNA–Protein interactions for RNA: ENST00000566119.5

EDC3-209, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-209ENST00000566119 ARID4BQ4LE39 1312 aaPredicted RBP32.99■■■□□ 2.87
EDC3-209ENST00000566119 POGZQ7Z3K3 1410 aa32.98■■■□□ 2.87
EDC3-209ENST00000566119 ZMYM4Q5VZL5 1548 aa32.95■■■□□ 2.87
EDC3-209ENST00000566119 YEATS2Q9ULM3 1422 aa32.94■■■□□ 2.86
EDC3-209ENST00000566119 MAGI2Q86UL8 1455 aa32.93■■■□□ 2.86
EDC3-209ENST00000566119 AFAP1Q8N556 730 aa32.92■■■□□ 2.86
EDC3-209ENST00000566119 ARHGEF40Q8TER5 1519 aa32.92■■■□□ 2.86
EDC3-209ENST00000566119 ZFYVE16Q7Z3T8 1539 aa32.89■■■□□ 2.86
EDC3-209ENST00000566119 MTUS2Q5JR59 1369 aa32.87■■■□□ 2.85
EDC3-209ENST00000566119 CDC42BPBQ9Y5S2 1711 aa32.86■■■□□ 2.85
EDC3-209ENST00000566119 ZNF518AQ6AHZ1 1483 aa32.85■■■□□ 2.85
EDC3-209ENST00000566119 PREX2Q70Z35 1606 aa32.84■■■□□ 2.85
EDC3-209ENST00000566119 ZNF777Q9ULD5 760 aaPredicted RBP32.82■■■□□ 2.84
EDC3-209ENST00000566119 GPATCH8Q9UKJ3 1502 aaKnown RBP32.82■■■□□ 2.84
EDC3-209ENST00000566119 ADAMTSL3P82987 1691 aa32.81■■■□□ 2.84
EDC3-209ENST00000566119 ARHGEF12Q9NZN5 1544 aa32.8■■■□□ 2.84
EDC3-209ENST00000566119 MYT1LQ9UL68 1186 aa32.79■■■□□ 2.84
EDC3-209ENST00000566119 BCORL1Q5H9F3 1711 aa32.78■■■□□ 2.84
EDC3-209ENST00000566119 CCNB3Q8WWL7 1395 aa32.78■■■□□ 2.84
EDC3-209ENST00000566119 ATP10AO60312 1499 aa32.78■■■□□ 2.84
EDC3-209ENST00000566119 TRAPPC8Q9Y2L5 1435 aa32.77■■■□□ 2.84
EDC3-209ENST00000566119 CDC42BPAQ5VT25 1732 aa32.77■■■□□ 2.84
EDC3-209ENST00000566119 CFDP1Q9UEE9 299 aaPredicted RBP32.76■■■□□ 2.83
EDC3-209ENST00000566119 PTPRMP28827 1452 aa32.75■■■□□ 2.83
EDC3-209ENST00000566119 ABCC1P33527 1531 aa32.75■■■□□ 2.83
EDC3-209ENST00000566119 KDM5CP41229 1560 aa32.75■■■□□ 2.83
EDC3-209ENST00000566119 MLECQ14165 292 aa32.73■■■□□ 2.83
EDC3-209ENST00000566119 C9orf84Q5VXU9 1444 aa32.71■■■□□ 2.83
EDC3-209ENST00000566119 VPS8Q8N3P4 1428 aa32.71■■■□□ 2.83
EDC3-209ENST00000566119 HNRNPMP52272 730 aaKnown RBP eCLIP32.71■■■□□ 2.83
EDC3-209ENST00000566119 SIGLEC1Q9BZZ2 1709 aa32.7■■■□□ 2.83
EDC3-209ENST00000566119 MLH3Q9UHC1 1453 aa32.69■■■□□ 2.82
EDC3-209ENST00000566119 MADDQ8WXG6 1647 aa32.69■■■□□ 2.82
EDC3-209ENST00000566119 EHBP1L1Q8N3D4 1523 aa32.68■■■□□ 2.82
EDC3-209ENST00000566119 SAMD9LQ8IVG5 1584 aa32.66■■■□□ 2.82
EDC3-209ENST00000566119 HECW2Q9P2P5 1572 aa32.65■■■□□ 2.82
EDC3-209ENST00000566119 ITSN2Q9NZM3 1697 aa32.64■■■□□ 2.82
EDC3-209ENST00000566119 KIAA1107Q9UPP5 1409 aa32.62■■■□□ 2.81
EDC3-209ENST00000566119 ZNF644Q9H582 1327 aaPredicted RBP32.61■■■□□ 2.81
EDC3-209ENST00000566119 SYCP2Q9BX26 1530 aa32.6■■■□□ 2.81
EDC3-209ENST00000566119 TIAM1Q13009 1591 aa32.59■■■□□ 2.81
EDC3-209ENST00000566119 DIP2CQ9Y2E4 1556 aa32.59■■■□□ 2.81
EDC3-209ENST00000566119 PLEKHH2Q8IVE3 1493 aa32.59■■■□□ 2.81
EDC3-209ENST00000566119 SPAG9O60271 1321 aaKnown RBP32.58■■■□□ 2.81
EDC3-209ENST00000566119 PLPPR3Q6T4P5 718 aa32.57■■■□□ 2.8
EDC3-209ENST00000566119 RIMS1Q86UR5 1692 aaKnown RBP32.56■■■□□ 2.8
EDC3-209ENST00000566119 NCOA2Q15596 1464 aa32.55■■■□□ 2.8
EDC3-209ENST00000566119 ABCA6Q8N139 1617 aa32.55■■■□□ 2.8
EDC3-209ENST00000566119 KANK4Q5T7N3 995 aaPredicted RBP32.52■■■□□ 2.8
EDC3-209ENST00000566119 KIDINS220Q9ULH0 1771 aa32.51■■■□□ 2.79
EDC3-209ENST00000566119 REREQ9P2R6 1566 aa32.51■■■□□ 2.79
EDC3-209ENST00000566119 LRRC9Q6ZRR7 1453 aa32.51■■■□□ 2.79
EDC3-209ENST00000566119 SUPT6HQ7KZ85 1726 aaKnown RBP32.48■■■□□ 2.79
EDC3-209ENST00000566119 MBD5Q9P267 1494 aa32.47■■■□□ 2.79
EDC3-209ENST00000566119 MAP3K1Q13233 1512 aa32.46■■■□□ 2.79
EDC3-209ENST00000566119 AGLP35573 1532 aa32.46■■■□□ 2.79
EDC3-209ENST00000566119 CEBPAP49715 358 aaPredicted RBP32.43■■■□□ 2.78
EDC3-209ENST00000566119 FER1L4A9Z1Z3 1794 aa32.42■■■□□ 2.78
EDC3-209ENST00000566119 ATP7AQ04656 1500 aa32.41■■■□□ 2.78
EDC3-209ENST00000566119 APLP2Q06481 763 aa32.39■■■□□ 2.78
EDC3-209ENST00000566119 ESF1Q9H501 851 aaKnown RBP32.37■■■□□ 2.77
EDC3-209ENST00000566119 LMTK3Q96Q04 1460 aa32.36■■■□□ 2.77
EDC3-209ENST00000566119 RSPH4AQ5TD94 716 aa32.36■■■□□ 2.77
EDC3-209ENST00000566119 INO80Q9ULG1 1556 aaPredicted RBP32.36■■■□□ 2.77
EDC3-209ENST00000566119 CAMSAP2Q08AD1 1489 aa32.35■■■□□ 2.77
EDC3-209ENST00000566119 A2MP01023 1474 aa32.34■■■□□ 2.77
EDC3-209ENST00000566119 RTEL1-TNFRSF6BF6WH68 1400 aa32.32■■■□□ 2.76
EDC3-209ENST00000566119 HSPA2P54652 639 aa32.3■■■□□ 2.76
EDC3-209ENST00000566119 CCDC141Q6ZP82 1450 aa32.29■■■□□ 2.76
EDC3-209ENST00000566119 TSPY4P0CV99 314 aa32.26■■■□□ 2.75
EDC3-209ENST00000566119 TSPY10P0CW01 314 aa32.26■■■□□ 2.75
EDC3-209ENST00000566119 GGT6Q6P531 493 aa32.25■■■□□ 2.75
EDC3-209ENST00000566119 MYOM3Q5VTT5 1437 aa32.25■■■□□ 2.75
EDC3-209ENST00000566119 PLXNC1O60486 1568 aa32.24■■■□□ 2.75
EDC3-209ENST00000566119 DHX29Q7Z478 1369 aaKnown RBP32.23■■■□□ 2.75
EDC3-209ENST00000566119 MIA2Q96PC5 1412 aa32.23■■■□□ 2.75
EDC3-209ENST00000566119 CNTLNQ9NXG0 1405 aa32.23■■■□□ 2.75
EDC3-209ENST00000566119 ARHGEF5Q12774 1597 aa32.19■■■□□ 2.74
EDC3-209ENST00000566119 ADGBQ8N7X0 1667 aa32.17■■■□□ 2.74
EDC3-209ENST00000566119 ZMYM3Q14202 1370 aa32.17■■■□□ 2.74
EDC3-209ENST00000566119 PPP6R1Q9UPN7 881 aa32.15■■■□□ 2.74
EDC3-209ENST00000566119 C3P01024 1663 aa32.14■■■□□ 2.74
EDC3-209ENST00000566119 KIF3BO15066 747 aa32.13■■■□□ 2.73
EDC3-209ENST00000566119 UHRF1BP1Q6BDS2 1440 aa32.11■■■□□ 2.73
EDC3-209ENST00000566119 PREX1Q8TCU6 1659 aa32.08■■■□□ 2.73
EDC3-209ENST00000566119 NPATQ14207 1427 aa32.03■■■□□ 2.72
EDC3-209ENST00000566119 MROH2AA6NES4 1674 aa32.03■■■□□ 2.72
EDC3-209ENST00000566119 SETD1BQ9UPS6 1966 aaKnown RBP32.02■■■□□ 2.72
EDC3-209ENST00000566119 MAST1Q9Y2H9 1570 aa32.02■■■□□ 2.72
EDC3-209ENST00000566119 CLTCQ00610 1675 aaKnown RBP32.02■■■□□ 2.72
EDC3-209ENST00000566119 FGD6Q6ZV73 1430 aa32.01■■■□□ 2.72
EDC3-209ENST00000566119 ILDR1Q86SU0 546 aaPredicted RBP31.99■■■□□ 2.71
EDC3-209ENST00000566119 ABCC5O15440 1437 aa31.99■■■□□ 2.71
EDC3-209ENST00000566119 PTPN23Q9H3S7 1636 aa31.98■■■□□ 2.71
EDC3-209ENST00000566119 WASHC2CQ9Y4E1 1318 aa31.98■■■□□ 2.71
EDC3-209ENST00000566119 PTPRKQ15262 1439 aa31.97■■■□□ 2.71
EDC3-209ENST00000566119 TCOF1Q13428 1488 aaKnown RBP31.94■■■□□ 2.7
EDC3-209ENST00000566119 RRP7BPQ9NSQ0 103 aa31.92■■■□□ 2.7
EDC3-209ENST00000566119 DAPK1P53355 1430 aa31.91■■■□□ 2.7
EDC3-209ENST00000566119 DMRT2Q9Y5R5 561 aa31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms