RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 RIMBP2O15034 1052 aa11.48□□□□□ -0.57
PALB2-204ENST00000566069 VARS2Q5ST30 1063 aaKnown RBP11.48□□□□□ -0.57
PALB2-204ENST00000566069 ZSWIM6Q9HCJ5 1215 aa11.47□□□□□ -0.57
PALB2-204ENST00000566069 BCL11BQ9C0K0 894 aaPredicted RBP11.46□□□□□ -0.57
PALB2-204ENST00000566069 NLRP6P59044 892 aa11.44□□□□□ -0.58
PALB2-204ENST00000566069 ZNF687Q8N1G0 1237 aa11.43□□□□□ -0.58
PALB2-204ENST00000566069 MFRPQ9BY79 579 aa11.43□□□□□ -0.58
PALB2-204ENST00000566069 ARSIQ5FYB1 569 aa11.42□□□□□ -0.58
PALB2-204ENST00000566069 STK24Q9Y6E0 443 aa11.41□□□□□ -0.58
PALB2-204ENST00000566069 KHSRPQ92945 711 aaKnown RBP eCLIP11.4□□□□□ -0.58
PALB2-204ENST00000566069 KIF3CO14782 793 aa11.37□□□□□ -0.59
PALB2-204ENST00000566069 PKD2Q13563 968 aa11.35□□□□□ -0.59
PALB2-204ENST00000566069 TAOK2Q9UL54 1235 aa11.35□□□□□ -0.59
PALB2-204ENST00000566069 STK25O00506 426 aa11.34□□□□□ -0.59
PALB2-204ENST00000566069 C2orf72A6NCS6 295 aa11.33□□□□□ -0.6
PALB2-204ENST00000566069 ECM2O94769 699 aaPredicted RBP11.33□□□□□ -0.6
PALB2-204ENST00000566069 ZNF316A6NFI3 1004 aaPredicted RBP11.32□□□□□ -0.6
PALB2-204ENST00000566069 RNF166Q96A37 237 aaPredicted RBP11.32□□□□□ -0.6
PALB2-204ENST00000566069 RGL2O15211 777 aa11.31□□□□□ -0.6
PALB2-204ENST00000566069 MYT1LQ9UL68 1186 aa11.3□□□□□ -0.6
PALB2-204ENST00000566069 PPP1R37O75864 691 aa11.26□□□□□ -0.61
PALB2-204ENST00000566069 POTEEQ6S8J3 1075 aa11.25□□□□□ -0.61
PALB2-204ENST00000566069 NUDT7P0C024 238 aa11.24□□□□□ -0.61
PALB2-204ENST00000566069 ANKRD13DQ6ZTN6 518 aa11.24□□□□□ -0.61
PALB2-204ENST00000566069 SLC34A2O95436 690 aa11.23□□□□□ -0.61
PALB2-204ENST00000566069 PCDHGA4Q9Y5G9 962 aa11.22□□□□□ -0.61
PALB2-204ENST00000566069 LSM11P83369 360 aaKnown RBP eCLIP11.21□□□□□ -0.61
PALB2-204ENST00000566069 LHX6Q9UPM6 363 aa11.21□□□□□ -0.61
PALB2-204ENST00000566069 PTGER2P43116 358 aa11.18□□□□□ -0.62
PALB2-204ENST00000566069 AXIN2Q9Y2T1 843 aa11.17□□□□□ -0.62
PALB2-204ENST00000566069 KDM4FA0A1W2PPD8 638 aa11.16□□□□□ -0.62
PALB2-204ENST00000566069 TMC2Q8TDI7 906 aa11.16□□□□□ -0.62
PALB2-204ENST00000566069 PBX2P40425 430 aa11.12□□□□□ -0.63
PALB2-204ENST00000566069 PTCD2Q8WV60 388 aaKnown RBP11.09□□□□□ -0.63
PALB2-204ENST00000566069 FOXK1P85037 733 aa11.07□□□□□ -0.64
PALB2-204ENST00000566069 ARHGAP33O14559 1287 aa11.04□□□□□ -0.64
PALB2-204ENST00000566069 PLPP6Q8IY26 295 aa11.04□□□□□ -0.64
PALB2-204ENST00000566069 HS6ST3Q8IZP7 471 aa11.04□□□□□ -0.64
PALB2-204ENST00000566069 GPHNQ9NQX3 736 aaPredicted RBP11.04□□□□□ -0.64
PALB2-204ENST00000566069 DSG2Q14126 1118 aa11.02□□□□□ -0.65
PALB2-204ENST00000566069 DMRTA1Q5VZB9 504 aa11.01□□□□□ -0.65
PALB2-204ENST00000566069 ADGRD1Q6QNK2 874 aa11.01□□□□□ -0.65
PALB2-204ENST00000566069 PSDA5PKW4 1024 aaPredicted RBP10.99□□□□□ -0.65
PALB2-204ENST00000566069 PSEN2P49810 448 aa10.99□□□□□ -0.65
PALB2-204ENST00000566069 HRO43593 1189 aa10.98□□□□□ -0.65
PALB2-204ENST00000566069 NKX1-1Q15270 411 aaPredicted RBP10.98□□□□□ -0.65
PALB2-204ENST00000566069 TK2O00142 265 aa10.95□□□□□ -0.66
PALB2-204ENST00000566069 CHGAP10645 457 aaKnown RBP10.95□□□□□ -0.66
PALB2-204ENST00000566069 HCSTQ9UBK5 93 aa10.94□□□□□ -0.66
PALB2-204ENST00000566069 DNAJC5Q9H3Z4 198 aa10.93□□□□□ -0.66
PALB2-204ENST00000566069 PPP4R3BQ5MIZ7 849 aa10.91□□□□□ -0.66
PALB2-204ENST00000566069 PLA2G2EQ9NZK7 142 aa10.91□□□□□ -0.66
PALB2-204ENST00000566069 TBC1D12O60347 775 aa10.9□□□□□ -0.66
PALB2-204ENST00000566069 OXER1Q8TDS5 423 aa10.9□□□□□ -0.66
PALB2-204ENST00000566069 CRISPLD2Q9H0B8 497 aa10.89□□□□□ -0.67
PALB2-204ENST00000566069 UPF1Q92900 1129 aaKnown RBP eCLIP10.85□□□□□ -0.67
PALB2-204ENST00000566069 KCNK17Q96T54 332 aa10.85□□□□□ -0.67
PALB2-204ENST00000566069 VPS9D1Q9Y2B5 631 aa10.84□□□□□ -0.67
PALB2-204ENST00000566069 NCKAP5LQ9HCH0 1330 aa10.84□□□□□ -0.67
PALB2-204ENST00000566069 KCTD12Q96CX2 325 aaKnown RBP10.83□□□□□ -0.68
PALB2-204ENST00000566069 PPP1R15BQ5SWA1 713 aa10.81□□□□□ -0.68
PALB2-204ENST00000566069 ZNF454Q8N9F8 522 aa10.8□□□□□ -0.68
PALB2-204ENST00000566069 ANO8Q9HCE9 1232 aaPredicted RBP10.8□□□□□ -0.68
PALB2-204ENST00000566069 BCL2L12Q9HB09 334 aa10.79□□□□□ -0.68
PALB2-204ENST00000566069 FOSBP53539 338 aa10.78□□□□□ -0.68
PALB2-204ENST00000566069 BHMG1C9JSJ3 638 aaPredicted RBP10.77□□□□□ -0.69
PALB2-204ENST00000566069 GTPBP6O43824 516 aaPredicted RBP10.77□□□□□ -0.69
PALB2-204ENST00000566069 SLC4A5Q9BY07 1137 aa10.77□□□□□ -0.69
PALB2-204ENST00000566069 PDE4AP27815 886 aa10.76□□□□□ -0.69
PALB2-204ENST00000566069 RYDENQ9NUL5 291 aaKnown RBP10.76□□□□□ -0.69
PALB2-204ENST00000566069 STAC3Q96MF2 364 aa10.75□□□□□ -0.69
PALB2-204ENST00000566069 KCNH8Q96L42 1107 aa10.73□□□□□ -0.69
PALB2-204ENST00000566069 ZBED2Q9BTP6 218 aa10.73□□□□□ -0.69
PALB2-204ENST00000566069 EVI5O60447 810 aa10.72□□□□□ -0.69
PALB2-204ENST00000566069 PTPN5P54829 565 aa10.72□□□□□ -0.69
PALB2-204ENST00000566069 LARP6Q9BRS8 491 aaKnown RBP10.71□□□□□ -0.69
PALB2-204ENST00000566069 ADAM33Q9BZ11 813 aa10.71□□□□□ -0.69
PALB2-204ENST00000566069 PTPREP23469 700 aa10.7□□□□□ -0.7
PALB2-204ENST00000566069 JPH4Q96JJ6 628 aa10.69□□□□□ -0.7
PALB2-204ENST00000566069 MFSD10Q14728 455 aa10.68□□□□□ -0.7
PALB2-204ENST00000566069 THSD4Q6ZMP0 1018 aa10.68□□□□□ -0.7
PALB2-204ENST00000566069 ZDHHC16Q969W1 377 aa10.68□□□□□ -0.7
PALB2-204ENST00000566069 EMILIN3Q9NT22 766 aa10.67□□□□□ -0.7
PALB2-204ENST00000566069 DDX27Q96GQ7 796 aaKnown RBP10.66□□□□□ -0.7
PALB2-204ENST00000566069 MAP3K9P80192 1104 aa10.63□□□□□ -0.71
PALB2-204ENST00000566069 IFFO2Q5TF58 517 aa10.63□□□□□ -0.71
PALB2-204ENST00000566069 PCDHGA10Q9Y5H3 936 aa10.63□□□□□ -0.71
PALB2-204ENST00000566069 CADPS2Q86UW7 1296 aa10.62□□□□□ -0.71
PALB2-204ENST00000566069 WNT2BQ93097 391 aa10.62□□□□□ -0.71
PALB2-204ENST00000566069 MRPL50Q8N5N7 158 aaKnown RBP10.61□□□□□ -0.71
PALB2-204ENST00000566069 COL9A1P20849 921 aa10.59□□□□□ -0.71
PALB2-204ENST00000566069 GOLGA8CPA6NN73 597 aa10.58□□□□□ -0.72
PALB2-204ENST00000566069 PROX2Q3B8N5 592 aa10.58□□□□□ -0.72
PALB2-204ENST00000566069 PPP1R3GB7ZBB8 358 aa10.57□□□□□ -0.72
PALB2-204ENST00000566069 NBPF3Q9H094 633 aa10.56□□□□□ -0.72
PALB2-204ENST00000566069 RABGEF1Q9UJ41 708 aa10.55□□□□□ -0.72
PALB2-204ENST00000566069 A0A0G2JS52 829 aa10.53□□□□□ -0.72
PALB2-204ENST00000566069 RGS20O76081 388 aa10.52□□□□□ -0.73
PALB2-204ENST00000566069 PHF14O94880 888 aa10.52□□□□□ -0.73
PALB2-204ENST00000566069 TYW1BQ6NUM6 668 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms