RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 ARHGAP5Q13017 1502 aa25.82■■□□□ 1.72
RNF40-207ENST00000565931 AKNAQ7Z591 1439 aa25.81■■□□□ 1.72
RNF40-207ENST00000565931 MYO5CQ9NQX4 1742 aa25.81■■□□□ 1.72
RNF40-207ENST00000565931 PREX2Q70Z35 1606 aa25.79■■□□□ 1.72
RNF40-207ENST00000565931 ZNF777Q9ULD5 760 aaPredicted RBP25.78■■□□□ 1.72
RNF40-207ENST00000565931 CDC42BPAQ5VT25 1732 aa25.77■■□□□ 1.72
RNF40-207ENST00000565931 MYOM3Q5VTT5 1437 aa25.77■■□□□ 1.72
RNF40-207ENST00000565931 COL17A1Q9UMD9 1497 aaPredicted RBP25.77■■□□□ 1.72
RNF40-207ENST00000565931 CDC42BPBQ9Y5S2 1711 aa25.76■■□□□ 1.71
RNF40-207ENST00000565931 ZNF644Q9H582 1327 aaPredicted RBP25.73■■□□□ 1.71
RNF40-207ENST00000565931 CFAP74Q9C0B2 1584 aa25.73■■□□□ 1.71
RNF40-207ENST00000565931 MIA2Q96PC5 1412 aa25.72■■□□□ 1.71
RNF40-207ENST00000565931 SCAPERQ9BY12 1400 aa25.72■■□□□ 1.71
RNF40-207ENST00000565931 ADGRL1O94910 1474 aa25.72■■□□□ 1.71
RNF40-207ENST00000565931 ITSN2Q9NZM3 1697 aa25.71■■□□□ 1.71
RNF40-207ENST00000565931 DENND4BO75064 1496 aaPredicted RBP25.68■■□□□ 1.7
RNF40-207ENST00000565931 RAPGEF3O95398 923 aa25.68■■□□□ 1.7
RNF40-207ENST00000565931 KIAA1107Q9UPP5 1409 aa25.68■■□□□ 1.7
RNF40-207ENST00000565931 KDM6BO15054 1643 aa25.67■■□□□ 1.7
RNF40-207ENST00000565931 FGD6Q6ZV73 1430 aa25.67■■□□□ 1.7
RNF40-207ENST00000565931 SAMD9LQ8IVG5 1584 aa25.67■■□□□ 1.7
RNF40-207ENST00000565931 ARHGEF12Q9NZN5 1544 aa25.67■■□□□ 1.7
RNF40-207ENST00000565931 PLEKHH2Q8IVE3 1493 aa25.66■■□□□ 1.7
RNF40-207ENST00000565931 HNRNPMP52272 730 aaKnown RBP eCLIP25.66■■□□□ 1.7
RNF40-207ENST00000565931 ABCC1P33527 1531 aa25.65■■□□□ 1.7
RNF40-207ENST00000565931 CAMSAP2Q08AD1 1489 aa25.63■■□□□ 1.69
RNF40-207ENST00000565931 AFAP1Q8N556 730 aa25.62■■□□□ 1.69
RNF40-207ENST00000565931 POGZQ7Z3K3 1410 aa25.62■■□□□ 1.69
RNF40-207ENST00000565931 TRAPPC8Q9Y2L5 1435 aa25.62■■□□□ 1.69
RNF40-207ENST00000565931 MBD5Q9P267 1494 aa25.6■■□□□ 1.69
RNF40-207ENST00000565931 SYCP2Q9BX26 1530 aa25.59■■□□□ 1.69
RNF40-207ENST00000565931 TCOF1Q13428 1488 aaKnown RBP25.59■■□□□ 1.69
RNF40-207ENST00000565931 RSPH4AQ5TD94 716 aa25.57■■□□□ 1.68
RNF40-207ENST00000565931 ZNF518AQ6AHZ1 1483 aa25.56■■□□□ 1.68
RNF40-207ENST00000565931 FRMPD1Q5SYB0 1578 aa25.56■■□□□ 1.68
RNF40-207ENST00000565931 PTPN23Q9H3S7 1636 aa25.55■■□□□ 1.68
RNF40-207ENST00000565931 FAM50AQ14320 339 aaKnown RBP25.54■■□□□ 1.68
RNF40-207ENST00000565931 RRBP1Q9P2E9 1410 aaKnown RBP25.52■■□□□ 1.68
RNF40-207ENST00000565931 RICTORQ6R327 1708 aa25.51■■□□□ 1.68
RNF40-207ENST00000565931 CCDC141Q6ZP82 1450 aa25.5■■□□□ 1.67
RNF40-207ENST00000565931 KDM5CP41229 1560 aa25.49■■□□□ 1.67
RNF40-207ENST00000565931 ZMYM4Q5VZL5 1548 aa25.49■■□□□ 1.67
RNF40-207ENST00000565931 SPAG9O60271 1321 aaKnown RBP25.49■■□□□ 1.67
RNF40-207ENST00000565931 ARHGEF5Q12774 1597 aa25.48■■□□□ 1.67
RNF40-207ENST00000565931 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.48■■□□□ 1.67
RNF40-207ENST00000565931 MAGI2Q86UL8 1455 aa25.47■■□□□ 1.67
RNF40-207ENST00000565931 MLH3Q9UHC1 1453 aa25.47■■□□□ 1.67
RNF40-207ENST00000565931 TSPY4P0CV99 314 aa25.47■■□□□ 1.67
RNF40-207ENST00000565931 TSPY10P0CW01 314 aa25.47■■□□□ 1.67
RNF40-207ENST00000565931 ABCC5O15440 1437 aa25.46■■□□□ 1.67
RNF40-207ENST00000565931 MYT1LQ9UL68 1186 aa25.45■■□□□ 1.66
RNF40-207ENST00000565931 YEATS2Q9ULM3 1422 aa25.44■■□□□ 1.66
RNF40-207ENST00000565931 DAPK1P53355 1430 aa25.43■■□□□ 1.66
RNF40-207ENST00000565931 RTEL1-TNFRSF6BF6WH68 1400 aa25.41■■□□□ 1.66
RNF40-207ENST00000565931 ZFYVE16Q7Z3T8 1539 aa25.4■■□□□ 1.66
RNF40-207ENST00000565931 HECW2Q9P2P5 1572 aa25.39■■□□□ 1.65
RNF40-207ENST00000565931 C9orf84Q5VXU9 1444 aa25.37■■□□□ 1.65
RNF40-207ENST00000565931 DNMT1P26358 1616 aaKnown RBP25.37■■□□□ 1.65
RNF40-207ENST00000565931 SHANK2Q9UPX8 1470 aa25.36■■□□□ 1.65
RNF40-207ENST00000565931 ATP7AQ04656 1500 aa25.36■■□□□ 1.65
RNF40-207ENST00000565931 PTPRKQ15262 1439 aa25.36■■□□□ 1.65
RNF40-207ENST00000565931 INO80Q9ULG1 1556 aaPredicted RBP25.35■■□□□ 1.65
RNF40-207ENST00000565931 ATP10AO60312 1499 aa25.34■■□□□ 1.65
RNF40-207ENST00000565931 ARHGEF40Q8TER5 1519 aa25.34■■□□□ 1.65
RNF40-207ENST00000565931 ITGAEP38570 1179 aa25.34■■□□□ 1.65
RNF40-207ENST00000565931 CHIC2Q9UKJ5 165 aa25.34■■□□□ 1.65
RNF40-207ENST00000565931 MAST1Q9Y2H9 1570 aa25.34■■□□□ 1.65
RNF40-207ENST00000565931 KIDINS220Q9ULH0 1771 aa25.33■■□□□ 1.65
RNF40-207ENST00000565931 DIP2CQ9Y2E4 1556 aa25.31■■□□□ 1.64
RNF40-207ENST00000565931 ABCA6Q8N139 1617 aa25.29■■□□□ 1.64
RNF40-207ENST00000565931 ANKRD30AQ9BXX3 1397 aa25.28■■□□□ 1.64
RNF40-207ENST00000565931 RRP7BPQ9NSQ0 103 aa25.27■■□□□ 1.64
RNF40-207ENST00000565931 NCOA1Q15788 1441 aa25.27■■□□□ 1.64
RNF40-207ENST00000565931 CROCC2H7BZ55 1655 aa25.26■■□□□ 1.63
RNF40-207ENST00000565931 DHX29Q7Z478 1369 aaKnown RBP25.26■■□□□ 1.63
RNF40-207ENST00000565931 ADGRL2O95490 1459 aa25.26■■□□□ 1.63
RNF40-207ENST00000565931 A2MP01023 1474 aa25.26■■□□□ 1.63
RNF40-207ENST00000565931 ROCK1Q13464 1354 aa25.24■■□□□ 1.63
RNF40-207ENST00000565931 REREQ9P2R6 1566 aa25.23■■□□□ 1.63
RNF40-207ENST00000565931 KIF15Q9NS87 1388 aa25.23■■□□□ 1.63
RNF40-207ENST00000565931 ARID4BQ4LE39 1312 aaPredicted RBP25.22■■□□□ 1.63
RNF40-207ENST00000565931 PLXNC1O60486 1568 aa25.22■■□□□ 1.63
RNF40-207ENST00000565931 AGLP35573 1532 aa25.18■■□□□ 1.62
RNF40-207ENST00000565931 DUOX2Q9NRD8 1548 aa25.17■■□□□ 1.62
RNF40-207ENST00000565931 ADGBQ8N7X0 1667 aa25.16■■□□□ 1.62
RNF40-207ENST00000565931 SIGLEC1Q9BZZ2 1709 aa25.15■■□□□ 1.62
RNF40-207ENST00000565931 KIF3BO15066 747 aa25.13■■□□□ 1.61
RNF40-207ENST00000565931 MLECQ14165 292 aa25.13■■□□□ 1.61
RNF40-207ENST00000565931 ERBINQ96RT1 1412 aa25.11■■□□□ 1.61
RNF40-207ENST00000565931 ANKRD50Q9ULJ7 1429 aa25.11■■□□□ 1.61
RNF40-207ENST00000565931 TRIM26Q12899 539 aaPredicted RBP25.09■■□□□ 1.61
RNF40-207ENST00000565931 GGT6Q6P531 493 aa25.08■■□□□ 1.61
RNF40-207ENST00000565931 NAIPQ13075 1403 aa25.08■■□□□ 1.61
RNF40-207ENST00000565931 HFM1A2PYH4 1435 aa25.06■■□□□ 1.6
RNF40-207ENST00000565931 KDM4FA0A1W2PPD8 638 aa25.04■■□□□ 1.6
RNF40-207ENST00000565931 PPP6R1Q9UPN7 881 aa25.02■■□□□ 1.6
RNF40-207ENST00000565931 EIF2AK4Q9P2K8 1649 aaKnown RBP25.01■■□□□ 1.59
RNF40-207ENST00000565931 BCORL1Q5H9F3 1711 aa25.01■■□□□ 1.59
RNF40-207ENST00000565931 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.97■■□□□ 1.593e-7■■□□□ 11.5
RNF40-207ENST00000565931 ADAMTSL3P82987 1691 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms