RNA–Protein interactions for RNA: ENST00000565908.6

TCF4-230, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-230ENST00000565908 POGZQ7Z3K3 1410 aa38.38■■■■□ 3.73
TCF4-230ENST00000565908 ZMYM4Q5VZL5 1548 aa38.36■■■■□ 3.73
TCF4-230ENST00000565908 MTUS2Q5JR59 1369 aa38.34■■■■□ 3.73
TCF4-230ENST00000565908 MAGI2Q86UL8 1455 aa38.32■■■■□ 3.72
TCF4-230ENST00000565908 ARHGEF40Q8TER5 1519 aa38.32■■■■□ 3.72
TCF4-230ENST00000565908 PREX2Q70Z35 1606 aa38.31■■■■□ 3.72
TCF4-230ENST00000565908 CDC42BPBQ9Y5S2 1711 aa38.29■■■■□ 3.72
TCF4-230ENST00000565908 ZFYVE16Q7Z3T8 1539 aa38.26■■■■□ 3.72
TCF4-230ENST00000565908 ZNF518AQ6AHZ1 1483 aa38.25■■■■□ 3.71
TCF4-230ENST00000565908 VPS8Q8N3P4 1428 aa38.25■■■■□ 3.71
TCF4-230ENST00000565908 ARID4BQ4LE39 1312 aaPredicted RBP38.23■■■■□ 3.71
TCF4-230ENST00000565908 YEATS2Q9ULM3 1422 aa38.22■■■■□ 3.71
TCF4-230ENST00000565908 GPATCH8Q9UKJ3 1502 aaKnown RBP38.22■■■■□ 3.71
TCF4-230ENST00000565908 CDC42BPAQ5VT25 1732 aa38.21■■■■□ 3.71
TCF4-230ENST00000565908 EHBP1L1Q8N3D4 1523 aa38.21■■■■□ 3.71
TCF4-230ENST00000565908 CCNB3Q8WWL7 1395 aa38.19■■■■□ 3.7
TCF4-230ENST00000565908 AFAP1Q8N556 730 aa38.18■■■■□ 3.7
TCF4-230ENST00000565908 ABCC1P33527 1531 aa38.17■■■■□ 3.7
TCF4-230ENST00000565908 KDM5CP41229 1560 aa38.14■■■■□ 3.7
TCF4-230ENST00000565908 ZNF777Q9ULD5 760 aaPredicted RBP38.13■■■■□ 3.69
TCF4-230ENST00000565908 CFDP1Q9UEE9 299 aaPredicted RBP38.12■■■■□ 3.69
TCF4-230ENST00000565908 ARHGEF12Q9NZN5 1544 aa38.12■■■■□ 3.69
TCF4-230ENST00000565908 TRAPPC8Q9Y2L5 1435 aa38.09■■■■□ 3.69
TCF4-230ENST00000565908 ATP10AO60312 1499 aa38.09■■■■□ 3.69
TCF4-230ENST00000565908 ADAMTSL3P82987 1691 aa38.08■■■■□ 3.69
TCF4-230ENST00000565908 TIAM1Q13009 1591 aa38.08■■■■□ 3.69
TCF4-230ENST00000565908 BCORL1Q5H9F3 1711 aa38.08■■■■□ 3.69
TCF4-230ENST00000565908 MYT1LQ9UL68 1186 aa38.07■■■■□ 3.68
TCF4-230ENST00000565908 ITSN2Q9NZM3 1697 aa38.06■■■■□ 3.68
TCF4-230ENST00000565908 SAMD9LQ8IVG5 1584 aa38.05■■■■□ 3.68
TCF4-230ENST00000565908 C9orf84Q5VXU9 1444 aa38.04■■■■□ 3.68
TCF4-230ENST00000565908 MLH3Q9UHC1 1453 aa38.04■■■■□ 3.68
TCF4-230ENST00000565908 HECW2Q9P2P5 1572 aa38.04■■■■□ 3.68
TCF4-230ENST00000565908 PLEKHH2Q8IVE3 1493 aa38.03■■■■□ 3.68
TCF4-230ENST00000565908 KIAA1107Q9UPP5 1409 aa38.01■■■■□ 3.68
TCF4-230ENST00000565908 SYCP2Q9BX26 1530 aa37.98■■■■□ 3.67
TCF4-230ENST00000565908 MAP3K1Q13233 1512 aa37.97■■■■□ 3.67
TCF4-230ENST00000565908 NCOA2Q15596 1464 aa37.97■■■■□ 3.67
TCF4-230ENST00000565908 HNRNPMP52272 730 aaKnown RBP eCLIP37.97■■■■□ 3.677e-6■■■□□ 17
TCF4-230ENST00000565908 PTPRMP28827 1452 aa37.96■■■■□ 3.67
TCF4-230ENST00000565908 SUPT6HQ7KZ85 1726 aaKnown RBP37.96■■■■□ 3.67
TCF4-230ENST00000565908 LRRC9Q6ZRR7 1453 aa37.96■■■■□ 3.67
TCF4-230ENST00000565908 SIGLEC1Q9BZZ2 1709 aa37.95■■■■□ 3.67
TCF4-230ENST00000565908 MADDQ8WXG6 1647 aa37.94■■■■□ 3.66
TCF4-230ENST00000565908 DIP2CQ9Y2E4 1556 aa37.93■■■■□ 3.66
TCF4-230ENST00000565908 MLECQ14165 292 aa37.9■■■■□ 3.66
TCF4-230ENST00000565908 SPAG9O60271 1321 aaKnown RBP37.88■■■■□ 3.66
TCF4-230ENST00000565908 ABCA6Q8N139 1617 aa37.88■■■■□ 3.65
TCF4-230ENST00000565908 REREQ9P2R6 1566 aa37.88■■■■□ 3.65
TCF4-230ENST00000565908 ZNF644Q9H582 1327 aaPredicted RBP37.87■■■■□ 3.65
TCF4-230ENST00000565908 KANK4Q5T7N3 995 aaPredicted RBP37.85■■■■□ 3.65
TCF4-230ENST00000565908 KIDINS220Q9ULH0 1771 aa37.84■■■■□ 3.65
TCF4-230ENST00000565908 APLP2Q06481 763 aa37.84■■■■□ 3.65
TCF4-230ENST00000565908 RIMS1Q86UR5 1692 aaKnown RBP37.81■■■■□ 3.64
TCF4-230ENST00000565908 MBD5Q9P267 1494 aa37.79■■■■□ 3.64
TCF4-230ENST00000565908 AGLP35573 1532 aa37.77■■■■□ 3.64
TCF4-230ENST00000565908 ATP7AQ04656 1500 aa37.77■■■■□ 3.64
TCF4-230ENST00000565908 CAMSAP2Q08AD1 1489 aa37.74■■■■□ 3.63
TCF4-230ENST00000565908 INO80Q9ULG1 1556 aaPredicted RBP37.72■■■■□ 3.63
TCF4-230ENST00000565908 FER1L4A9Z1Z3 1794 aa37.71■■■■□ 3.63
TCF4-230ENST00000565908 RSPH4AQ5TD94 716 aa37.71■■■■□ 3.63
TCF4-230ENST00000565908 CCDC141Q6ZP82 1450 aa37.66■■■■□ 3.62
TCF4-230ENST00000565908 RTEL1-TNFRSF6BF6WH68 1400 aa37.66■■■■□ 3.62
TCF4-230ENST00000565908 PLPPR3Q6T4P5 718 aa37.65■■■■□ 3.62
TCF4-230ENST00000565908 MYOM3Q5VTT5 1437 aa37.64■■■■□ 3.62
TCF4-230ENST00000565908 MIA2Q96PC5 1412 aa37.63■■■■□ 3.61
TCF4-230ENST00000565908 A2MP01023 1474 aa37.63■■■■□ 3.61
TCF4-230ENST00000565908 ESF1Q9H501 851 aaKnown RBP37.59■■■■□ 3.61
TCF4-230ENST00000565908 ARHGEF5Q12774 1597 aa37.58■■■■□ 3.61
TCF4-230ENST00000565908 PLXNC1O60486 1568 aa37.57■■■■□ 3.6
TCF4-230ENST00000565908 TSPY4P0CV99 314 aa37.55■■■■□ 3.6
TCF4-230ENST00000565908 TSPY10P0CW01 314 aa37.55■■■■□ 3.6
TCF4-230ENST00000565908 ADGBQ8N7X0 1667 aa37.53■■■■□ 3.6
TCF4-230ENST00000565908 CEBPAP49715 358 aaPredicted RBP37.51■■■■□ 3.6
TCF4-230ENST00000565908 CNTLNQ9NXG0 1405 aa37.51■■■■□ 3.59
TCF4-230ENST00000565908 LMTK3Q96Q04 1460 aa37.5■■■■□ 3.59
TCF4-230ENST00000565908 DHX29Q7Z478 1369 aaKnown RBP37.49■■■■□ 3.59
TCF4-230ENST00000565908 GGT6Q6P531 493 aa37.42■■■■□ 3.58
TCF4-230ENST00000565908 PPP6R1Q9UPN7 881 aa37.4■■■■□ 3.58
TCF4-230ENST00000565908 FGD6Q6ZV73 1430 aa37.38■■■■□ 3.57
TCF4-230ENST00000565908 MAST1Q9Y2H9 1570 aa37.38■■■■□ 3.57
TCF4-230ENST00000565908 PTPN23Q9H3S7 1636 aa37.36■■■■□ 3.57
TCF4-230ENST00000565908 C3P01024 1663 aa37.35■■■■□ 3.57
TCF4-230ENST00000565908 KIF3BO15066 747 aa37.33■■■■□ 3.57
TCF4-230ENST00000565908 ZMYM3Q14202 1370 aa37.32■■■■□ 3.57
TCF4-230ENST00000565908 HSPA2P54652 639 aa37.32■■■■□ 3.56
TCF4-230ENST00000565908 TCOF1Q13428 1488 aaKnown RBP37.32■■■■□ 3.56
TCF4-230ENST00000565908 MROH2AA6NES4 1674 aa37.31■■■■□ 3.56
TCF4-230ENST00000565908 PREX1Q8TCU6 1659 aa37.3■■■■□ 3.56
TCF4-230ENST00000565908 UHRF1BP1Q6BDS2 1440 aa37.28■■■■□ 3.56
TCF4-230ENST00000565908 ABCC5O15440 1437 aa37.27■■■■□ 3.56
TCF4-230ENST00000565908 SHANK2Q9UPX8 1470 aa37.26■■■■□ 3.55
TCF4-230ENST00000565908 CLTCQ00610 1675 aaKnown RBP37.25■■■■□ 3.55
TCF4-230ENST00000565908 SETD1BQ9UPS6 1966 aaKnown RBP37.25■■■■□ 3.55
TCF4-230ENST00000565908 NPATQ14207 1427 aa37.24■■■■□ 3.55
TCF4-230ENST00000565908 DAPK1P53355 1430 aa37.22■■■■□ 3.55
TCF4-230ENST00000565908 DNMT1P26358 1616 aaKnown RBP37.19■■■■□ 3.54
TCF4-230ENST00000565908 FAM135AQ9P2D6 1515 aa37.19■■■■□ 3.54
TCF4-230ENST00000565908 CROCC2H7BZ55 1655 aa37.16■■■■□ 3.54
TCF4-230ENST00000565908 DUOX2Q9NRD8 1548 aa37.15■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms