RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 KDM2AQ9Y2K7 1162 aa4.84□□□□□ -1.63
CHD9-216ENST00000565803 AQRO60306 1485 aaKnown RBP eCLIP4.84□□□□□ -1.646e-7■■□□□ 14.1
CHD9-216ENST00000565803 AKT1S1Q96B36 256 aa4.84□□□□□ -1.64
CHD9-216ENST00000565803 UBTFP17480 764 aaKnown RBP4.83□□□□□ -1.64
CHD9-216ENST00000565803 PAXIP1Q6ZW49 1069 aaPredicted RBP4.83□□□□□ -1.64
CHD9-216ENST00000565803 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.83□□□□□ -1.64
CHD9-216ENST00000565803 PREX1Q8TCU6 1659 aa4.83□□□□□ -1.64
CHD9-216ENST00000565803 LTBP4Q8N2S1 1624 aa4.83□□□□□ -1.64
CHD9-216ENST00000565803 ERICH3Q5RHP9 1530 aa4.83□□□□□ -1.64
CHD9-216ENST00000565803 ARAP3Q8WWN8 1544 aa4.83□□□□□ -1.64
CHD9-216ENST00000565803 TTC37Q6PGP7 1564 aa4.83□□□□□ -1.64
CHD9-216ENST00000565803 MNX1P50219 401 aaPredicted RBP4.82□□□□□ -1.64
CHD9-216ENST00000565803 STRCQ7RTU9 1775 aa4.82□□□□□ -1.64
CHD9-216ENST00000565803 PLB1Q6P1J6 1458 aa4.82□□□□□ -1.64
CHD9-216ENST00000565803 PLEKHG5O94827 1062 aa4.82□□□□□ -1.64
CHD9-216ENST00000565803 STAG3Q9UJ98 1225 aa4.82□□□□□ -1.64
CHD9-216ENST00000565803 FER1L4A9Z1Z3 1794 aa4.81□□□□□ -1.64
CHD9-216ENST00000565803 POLR3GLQ9BT43 218 aa4.8□□□□□ -1.64
CHD9-216ENST00000565803 PTPRMP28827 1452 aa4.8□□□□□ -1.64
CHD9-216ENST00000565803 MED1Q15648 1581 aaPredicted RBP4.8□□□□□ -1.64
CHD9-216ENST00000565803 PTPRTO14522 1441 aa4.8□□□□□ -1.64
CHD9-216ENST00000565803 CDK11BP21127 795 aaKnown RBP4.8□□□□□ -1.64
CHD9-216ENST00000565803 IFNLR1Q8IU57 520 aaPredicted RBP4.8□□□□□ -1.64
CHD9-216ENST00000565803 CDK11AQ9UQ88 783 aaPredicted RBP4.8□□□□□ -1.64
CHD9-216ENST00000565803 KIF21BO75037 1637 aa4.79□□□□□ -1.64
CHD9-216ENST00000565803 VASPP50552 380 aaPredicted RBP4.79□□□□□ -1.64
CHD9-216ENST00000565803 COL17A1Q9UMD9 1497 aaPredicted RBP4.78□□□□□ -1.64
CHD9-216ENST00000565803 KDM5BQ9UGL1 1544 aa4.78□□□□□ -1.64
CHD9-216ENST00000565803 TSPOAP1O95153 1857 aa4.78□□□□□ -1.64
CHD9-216ENST00000565803 ABCC2Q92887 1545 aa4.78□□□□□ -1.64
CHD9-216ENST00000565803 PHLDB1Q86UU1 1377 aa4.77□□□□□ -1.65
CHD9-216ENST00000565803 RBM42Q9BTD8 480 aaKnown RBP4.77□□□□□ -1.65
CHD9-216ENST00000565803 DISP3Q9P2K9 1392 aa4.76□□□□□ -1.65
CHD9-216ENST00000565803 BIVM-ERCC5R4GMW8 1640 aa4.76□□□□□ -1.65
CHD9-216ENST00000565803 ZNF692Q9BU19 519 aaPredicted RBP4.76□□□□□ -1.65
CHD9-216ENST00000565803 ZMYM4Q5VZL5 1548 aa4.76□□□□□ -1.65
CHD9-216ENST00000565803 FHAD1B1AJZ9 1412 aa4.76□□□□□ -1.65
CHD9-216ENST00000565803 ARHGEF40Q8TER5 1519 aa4.76□□□□□ -1.65
CHD9-216ENST00000565803 MADDQ8WXG6 1647 aa4.75□□□□□ -1.65
CHD9-216ENST00000565803 FRMPD1Q5SYB0 1578 aa4.75□□□□□ -1.65
CHD9-216ENST00000565803 FGD5Q6ZNL6 1462 aa4.75□□□□□ -1.65
CHD9-216ENST00000565803 CUL7Q14999 1698 aa4.75□□□□□ -1.65
CHD9-216ENST00000565803 CERKQ8TCT0 537 aa4.74□□□□□ -1.65
CHD9-216ENST00000565803 CREBZFQ9NS37 354 aa4.74□□□□□ -1.65
CHD9-216ENST00000565803 SOGA1O94964 1423 aa4.74□□□□□ -1.65
CHD9-216ENST00000565803 FAM9AQ8IZU1 332 aaPredicted RBP4.74□□□□□ -1.65
CHD9-216ENST00000565803 CUX1P39880 1505 aa4.74□□□□□ -1.65
CHD9-216ENST00000565803 REM2Q8IYK8 340 aaPredicted RBP4.74□□□□□ -1.65
CHD9-216ENST00000565803 REREQ9P2R6 1566 aa4.73□□□□□ -1.65
CHD9-216ENST00000565803 ZNF142P52746 1687 aaPredicted RBP4.73□□□□□ -1.65
CHD9-216ENST00000565803 FXR2P51116 673 aaKnown RBP eCLIP4.72□□□□□ -1.657e-7■■■□□ 17
CHD9-216ENST00000565803 PKD2Q13563 968 aa4.72□□□□□ -1.65
CHD9-216ENST00000565803 CCDC9Q9Y3X0 531 aaKnown RBP4.72□□□□□ -1.65
CHD9-216ENST00000565803 ZCCHC11Q5TAX3 1644 aaKnown RBP4.71□□□□□ -1.65
CHD9-216ENST00000565803 LOC105371045A0A1W2PR82 267 aa4.71□□□□□ -1.65
CHD9-216ENST00000565803 TSHZ2Q9NRE2 1034 aa4.71□□□□□ -1.65
CHD9-216ENST00000565803 NUBP1P53384 320 aa4.71□□□□□ -1.66
CHD9-216ENST00000565803 RAD54L2Q9Y4B4 1467 aa4.71□□□□□ -1.66
CHD9-216ENST00000565803 ZBTB7CA1YPR0 619 aa4.71□□□□□ -1.66
CHD9-216ENST00000565803 HRCP23327 699 aa4.71□□□□□ -1.66
CHD9-216ENST00000565803 CHRM1P11229 460 aaPredicted RBP4.7□□□□□ -1.66
CHD9-216ENST00000565803 ARHGEF12Q9NZN5 1544 aa4.7□□□□□ -1.66
CHD9-216ENST00000565803 ABCA9Q8IUA7 1624 aa4.7□□□□□ -1.66
CHD9-216ENST00000565803 RIMS1Q86UR5 1692 aaKnown RBP4.7□□□□□ -1.66
CHD9-216ENST00000565803 RICTORQ6R327 1708 aa4.7□□□□□ -1.66
CHD9-216ENST00000565803 CCDC88BA6NC98 1476 aa4.7□□□□□ -1.66
CHD9-216ENST00000565803 SGIP1Q9BQI5 828 aa4.69□□□□□ -1.66
CHD9-216ENST00000565803 MROH2AA6NES4 1674 aa4.69□□□□□ -1.66
CHD9-216ENST00000565803 HMGB1P09429 215 aaKnown RBP4.68□□□□□ -1.66
CHD9-216ENST00000565803 CFAP74Q9C0B2 1584 aa4.68□□□□□ -1.66
CHD9-216ENST00000565803 PRG4Q92954 1404 aaPredicted RBP4.68□□□□□ -1.66
CHD9-216ENST00000565803 PDIA4P13667 645 aaKnown RBP4.68□□□□□ -1.66
CHD9-216ENST00000565803 LRP5O75197 1615 aa4.67□□□□□ -1.66
CHD9-216ENST00000565803 PITPNM1O00562 1244 aa4.67□□□□□ -1.66
CHD9-216ENST00000565803 SPDYE1Q8NFV5 336 aaPredicted RBP4.67□□□□□ -1.66
CHD9-216ENST00000565803 ASXL2Q76L83 1435 aa4.67□□□□□ -1.66
CHD9-216ENST00000565803 FAM69CQ0P6D2 419 aa4.67□□□□□ -1.66
CHD9-216ENST00000565803 CHMP4AQ9BY43 222 aa4.67□□□□□ -1.66
CHD9-216ENST00000565803 YEATS2Q9ULM3 1422 aa4.67□□□□□ -1.66
CHD9-216ENST00000565803 NEO1Q92859 1461 aa4.67□□□□□ -1.66
CHD9-216ENST00000565803 ALKQ9UM73 1620 aa4.66□□□□□ -1.66
CHD9-216ENST00000565803 SPRYD3Q8NCJ5 442 aa4.65□□□□□ -1.66
CHD9-216ENST00000565803 MAGI2Q86UL8 1455 aa4.65□□□□□ -1.66
CHD9-216ENST00000565803 SIGLEC1Q9BZZ2 1709 aa4.65□□□□□ -1.66
CHD9-216ENST00000565803 MYT1LQ9UL68 1186 aa4.65□□□□□ -1.67
CHD9-216ENST00000565803 SPOCK2Q92563 424 aa4.64□□□□□ -1.67
CHD9-216ENST00000565803 CHMP7Q8WUX9 453 aaPredicted RBP4.64□□□□□ -1.67
CHD9-216ENST00000565803 WDR7Q9Y4E6 1490 aa4.64□□□□□ -1.67
CHD9-216ENST00000565803 SYNMO15061 1565 aa4.64□□□□□ -1.67
CHD9-216ENST00000565803 PLA2R1Q13018 1463 aa4.63□□□□□ -1.67
CHD9-216ENST00000565803 DHX37Q8IY37 1157 aaKnown RBP4.63□□□□□ -1.67
CHD9-216ENST00000565803 CPS1P31327 1500 aa4.63□□□□□ -1.67
CHD9-216ENST00000565803 TDRD9Q8NDG6 1382 aaKnown RBP4.63□□□□□ -1.67
CHD9-216ENST00000565803 UGGT2Q9NYU1 1516 aa4.63□□□□□ -1.67
CHD9-216ENST00000565803 HSP90B1P14625 803 aaKnown RBP4.63□□□□□ -1.67
CHD9-216ENST00000565803 EFCAB5A4FU69 1503 aa4.62□□□□□ -1.67
CHD9-216ENST00000565803 ABCA8O94911 1581 aa4.61□□□□□ -1.67
CHD9-216ENST00000565803 SETD1BQ9UPS6 1966 aaKnown RBP4.61□□□□□ -1.67
CHD9-216ENST00000565803 FHOD3Q2V2M9 1422 aa4.61□□□□□ -1.67
CHD9-216ENST00000565803 CDK12Q9NYV4 1490 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms