RNA–Protein interactions for RNA: ENST00000565309.1

TRAPPC2L-210, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 3

Gene TRAPPC2L, Length 699 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-210ENST00000565309 PREX2Q70Z35 1606 aa20.54■□□□□ 0.88
TRAPPC2L-210ENST00000565309 CDC42BPBQ9Y5S2 1711 aa20.54■□□□□ 0.88
TRAPPC2L-210ENST00000565309 CCNB3Q8WWL7 1395 aa20.54■□□□□ 0.88
TRAPPC2L-210ENST00000565309 CDC42BPAQ5VT25 1732 aa20.53■□□□□ 0.88
TRAPPC2L-210ENST00000565309 SUPT6HQ7KZ85 1726 aaKnown RBP20.53■□□□□ 0.88
TRAPPC2L-210ENST00000565309 GPATCH8Q9UKJ3 1502 aaKnown RBP20.53■□□□□ 0.88
TRAPPC2L-210ENST00000565309 NCOA2Q15596 1464 aa20.51■□□□□ 0.87
TRAPPC2L-210ENST00000565309 RAPGEF3O95398 923 aa20.51■□□□□ 0.87
TRAPPC2L-210ENST00000565309 ADGRL1O94910 1474 aa20.5■□□□□ 0.87
TRAPPC2L-210ENST00000565309 CFDP1Q9UEE9 299 aaPredicted RBP20.49■□□□□ 0.87
TRAPPC2L-210ENST00000565309 SCAPERQ9BY12 1400 aa20.48■□□□□ 0.87
TRAPPC2L-210ENST00000565309 ZNF777Q9ULD5 760 aaPredicted RBP20.48■□□□□ 0.87
TRAPPC2L-210ENST00000565309 DENND4BO75064 1496 aaPredicted RBP20.48■□□□□ 0.87
TRAPPC2L-210ENST00000565309 FRMPD1Q5SYB0 1578 aa20.44■□□□□ 0.86
TRAPPC2L-210ENST00000565309 ITSN2Q9NZM3 1697 aa20.44■□□□□ 0.86
TRAPPC2L-210ENST00000565309 RICTORQ6R327 1708 aa20.42■□□□□ 0.86
TRAPPC2L-210ENST00000565309 POGZQ7Z3K3 1410 aa20.41■□□□□ 0.86
TRAPPC2L-210ENST00000565309 ABCC1P33527 1531 aa20.41■□□□□ 0.86
TRAPPC2L-210ENST00000565309 SAMD9LQ8IVG5 1584 aa20.41■□□□□ 0.86
TRAPPC2L-210ENST00000565309 ARHGEF12Q9NZN5 1544 aa20.39■□□□□ 0.85
TRAPPC2L-210ENST00000565309 ZNF644Q9H582 1327 aaPredicted RBP20.39■□□□□ 0.85
TRAPPC2L-210ENST00000565309 AFAP1Q8N556 730 aa20.38■□□□□ 0.85
TRAPPC2L-210ENST00000565309 HNRNPMP52272 730 aaKnown RBP eCLIP20.37■□□□□ 0.85
TRAPPC2L-210ENST00000565309 ZNF518AQ6AHZ1 1483 aa20.37■□□□□ 0.85
TRAPPC2L-210ENST00000565309 PLEKHH2Q8IVE3 1493 aa20.37■□□□□ 0.85
TRAPPC2L-210ENST00000565309 TRAPPC8Q9Y2L5 1435 aa20.36■□□□□ 0.85
TRAPPC2L-210ENST00000565309 SYCP2Q9BX26 1530 aa20.36■□□□□ 0.85
TRAPPC2L-210ENST00000565309 MYOM3Q5VTT5 1437 aa20.36■□□□□ 0.85
TRAPPC2L-210ENST00000565309 KIAA1107Q9UPP5 1409 aa20.36■□□□□ 0.85
TRAPPC2L-210ENST00000565309 PPARGC1BQ86YN6 1023 aaKnown RBP20.35■□□□□ 0.85
TRAPPC2L-210ENST00000565309 ZMYM4Q5VZL5 1548 aa20.35■□□□□ 0.85
TRAPPC2L-210ENST00000565309 CAMSAP2Q08AD1 1489 aa20.31■□□□□ 0.84
TRAPPC2L-210ENST00000565309 KDM5CP41229 1560 aa20.31■□□□□ 0.84
TRAPPC2L-210ENST00000565309 MIA2Q96PC5 1412 aa20.31■□□□□ 0.84
TRAPPC2L-210ENST00000565309 MAGI2Q86UL8 1455 aa20.3■□□□□ 0.84
TRAPPC2L-210ENST00000565309 MYT1LQ9UL68 1186 aa20.3■□□□□ 0.84
TRAPPC2L-210ENST00000565309 YEATS2Q9ULM3 1422 aa20.29■□□□□ 0.84
TRAPPC2L-210ENST00000565309 ZFYVE16Q7Z3T8 1539 aa20.29■□□□□ 0.84
TRAPPC2L-210ENST00000565309 ARHGEF40Q8TER5 1519 aa20.28■□□□□ 0.84
TRAPPC2L-210ENST00000565309 MBD5Q9P267 1494 aa20.28■□□□□ 0.84
TRAPPC2L-210ENST00000565309 FGD6Q6ZV73 1430 aa20.27■□□□□ 0.83
TRAPPC2L-210ENST00000565309 HECW2Q9P2P5 1572 aa20.26■□□□□ 0.83
TRAPPC2L-210ENST00000565309 MLH3Q9UHC1 1453 aa20.26■□□□□ 0.83
TRAPPC2L-210ENST00000565309 SPAG9O60271 1321 aaKnown RBP20.26■□□□□ 0.83
TRAPPC2L-210ENST00000565309 PTPN23Q9H3S7 1636 aa20.24■□□□□ 0.83
TRAPPC2L-210ENST00000565309 RSPH4AQ5TD94 716 aa20.23■□□□□ 0.83
TRAPPC2L-210ENST00000565309 ATP10AO60312 1499 aa20.22■□□□□ 0.83
TRAPPC2L-210ENST00000565309 CCDC141Q6ZP82 1450 aa20.22■□□□□ 0.83
TRAPPC2L-210ENST00000565309 KIDINS220Q9ULH0 1771 aa20.21■□□□□ 0.83
TRAPPC2L-210ENST00000565309 ARHGEF5Q12774 1597 aa20.21■□□□□ 0.83
TRAPPC2L-210ENST00000565309 ARID4BQ4LE39 1312 aaPredicted RBP20.2■□□□□ 0.82
TRAPPC2L-210ENST00000565309 TCOF1Q13428 1488 aaKnown RBP20.19■□□□□ 0.82
TRAPPC2L-210ENST00000565309 ATP7AQ04656 1500 aa20.19■□□□□ 0.82
TRAPPC2L-210ENST00000565309 DIP2CQ9Y2E4 1556 aa20.19■□□□□ 0.82
TRAPPC2L-210ENST00000565309 ABCA6Q8N139 1617 aa20.19■□□□□ 0.82
TRAPPC2L-210ENST00000565309 INO80Q9ULG1 1556 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC2L-210ENST00000565309 TSPY4P0CV99 314 aa20.18■□□□□ 0.82
TRAPPC2L-210ENST00000565309 TSPY10P0CW01 314 aa20.18■□□□□ 0.82
TRAPPC2L-210ENST00000565309 C9orf84Q5VXU9 1444 aa20.18■□□□□ 0.82
TRAPPC2L-210ENST00000565309 FAM50AQ14320 339 aaKnown RBP20.17■□□□□ 0.82
TRAPPC2L-210ENST00000565309 KDM4FA0A1W2PPD8 638 aa20.16■□□□□ 0.82
TRAPPC2L-210ENST00000565309 RTEL1-TNFRSF6BF6WH68 1400 aa20.16■□□□□ 0.82
TRAPPC2L-210ENST00000565309 SIGLEC1Q9BZZ2 1709 aa20.15■□□□□ 0.82
TRAPPC2L-210ENST00000565309 ABCC5O15440 1437 aa20.12■□□□□ 0.81
TRAPPC2L-210ENST00000565309 REREQ9P2R6 1566 aa20.11■□□□□ 0.81
TRAPPC2L-210ENST00000565309 DAPK1P53355 1430 aa20.1■□□□□ 0.81
TRAPPC2L-210ENST00000565309 DNMT1P26358 1616 aaKnown RBP20.1■□□□□ 0.81
TRAPPC2L-210ENST00000565309 MLECQ14165 292 aa20.1■□□□□ 0.81
TRAPPC2L-210ENST00000565309 MAST1Q9Y2H9 1570 aa20.09■□□□□ 0.81
TRAPPC2L-210ENST00000565309 BCORL1Q5H9F3 1711 aa20.09■□□□□ 0.81
TRAPPC2L-210ENST00000565309 A2MP01023 1474 aa20.09■□□□□ 0.81
TRAPPC2L-210ENST00000565309 CROCC2H7BZ55 1655 aa20.07■□□□□ 0.8
TRAPPC2L-210ENST00000565309 ADGBQ8N7X0 1667 aa20.07■□□□□ 0.8
TRAPPC2L-210ENST00000565309 SHANK2Q9UPX8 1470 aa20.06■□□□□ 0.8
TRAPPC2L-210ENST00000565309 AGLP35573 1532 aa20.06■□□□□ 0.8
TRAPPC2L-210ENST00000565309 CHIC2Q9UKJ5 165 aa20.05■□□□□ 0.8
TRAPPC2L-210ENST00000565309 ADAMTSL3P82987 1691 aa20.05■□□□□ 0.8
TRAPPC2L-210ENST00000565309 PLXNC1O60486 1568 aa20.04■□□□□ 0.8
TRAPPC2L-210ENST00000565309 DHX29Q7Z478 1369 aaKnown RBP20.04■□□□□ 0.8
TRAPPC2L-210ENST00000565309 RRBP1Q9P2E9 1410 aaKnown RBP20.03■□□□□ 0.8
TRAPPC2L-210ENST00000565309 AEBP2Q6ZN18 517 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC2L-210ENST00000565309 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.03■□□□□ 0.8
TRAPPC2L-210ENST00000565309 RRP7BPQ9NSQ0 103 aa20.01■□□□□ 0.79
TRAPPC2L-210ENST00000565309 ITGAEP38570 1179 aa20■□□□□ 0.79
TRAPPC2L-210ENST00000565309 MADDQ8WXG6 1647 aa20■□□□□ 0.79
TRAPPC2L-210ENST00000565309 ANKRD30AQ9BXX3 1397 aa19.99■□□□□ 0.79
TRAPPC2L-210ENST00000565309 KIF15Q9NS87 1388 aa19.99■□□□□ 0.79
TRAPPC2L-210ENST00000565309 PTPRKQ15262 1439 aa19.99■□□□□ 0.79
TRAPPC2L-210ENST00000565309 NCOA1Q15788 1441 aa19.97■□□□□ 0.79
TRAPPC2L-210ENST00000565309 KIF3BO15066 747 aa19.97■□□□□ 0.79
TRAPPC2L-210ENST00000565309 GGT6Q6P531 493 aa19.97■□□□□ 0.79
TRAPPC2L-210ENST00000565309 DUOX2Q9NRD8 1548 aa19.97■□□□□ 0.79
TRAPPC2L-210ENST00000565309 ADGRL2O95490 1459 aa19.96■□□□□ 0.79
TRAPPC2L-210ENST00000565309 FER1L4A9Z1Z3 1794 aa19.95■□□□□ 0.78
TRAPPC2L-210ENST00000565309 RIMS1Q86UR5 1692 aaKnown RBP19.95■□□□□ 0.78
TRAPPC2L-210ENST00000565309 PTPRMP28827 1452 aa19.94■□□□□ 0.78
TRAPPC2L-210ENST00000565309 ESF1Q9H501 851 aaKnown RBP19.94■□□□□ 0.78
TRAPPC2L-210ENST00000565309 PLPPR3Q6T4P5 718 aa19.9■□□□□ 0.78
TRAPPC2L-210ENST00000565309 ROCK1Q13464 1354 aa19.9■□□□□ 0.78
TRAPPC2L-210ENST00000565309 ERBINQ96RT1 1412 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms