RNA–Protein interactions for RNA: ENST00000564988.5

TM6SF1-206, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 4

Gene TM6SF1, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-206ENST00000564988 FANCAO15360 1455 aa37.88■■■■□ 3.65
TM6SF1-206ENST00000564988 NEO1Q92859 1461 aa37.87■■■■□ 3.65
TM6SF1-206ENST00000564988 EFCAB2Q5VUJ9 269 aa37.86■■■■□ 3.65
TM6SF1-206ENST00000564988 CDC42BPBQ9Y5S2 1711 aa37.85■■■■□ 3.65
TM6SF1-206ENST00000564988 PHLDB1Q86UU1 1377 aa37.83■■■■□ 3.65
TM6SF1-206ENST00000564988 PPARGC1BQ86YN6 1023 aaKnown RBP37.82■■■■□ 3.64
TM6SF1-206ENST00000564988 CFDP1Q9UEE9 299 aaPredicted RBP37.81■■■■□ 3.64
TM6SF1-206ENST00000564988 MYOM3Q5VTT5 1437 aa37.79■■■■□ 3.64
TM6SF1-206ENST00000564988 AKNAQ7Z591 1439 aa37.78■■■■□ 3.64
TM6SF1-206ENST00000564988 MIA2Q96PC5 1412 aa37.71■■■■□ 3.63
TM6SF1-206ENST00000564988 ZNF777Q9ULD5 760 aaPredicted RBP37.71■■■■□ 3.63
TM6SF1-206ENST00000564988 ADGRL1O94910 1474 aa37.7■■■■□ 3.63
TM6SF1-206ENST00000564988 SAMD9LQ8IVG5 1584 aa37.68■■■■□ 3.62
TM6SF1-206ENST00000564988 KDM6BO15054 1643 aa37.67■■■■□ 3.62
TM6SF1-206ENST00000564988 PLEKHH2Q8IVE3 1493 aa37.66■■■■□ 3.62
TM6SF1-206ENST00000564988 ABCC1P33527 1531 aa37.65■■■■□ 3.62
TM6SF1-206ENST00000564988 FGD6Q6ZV73 1430 aa37.64■■■■□ 3.62
TM6SF1-206ENST00000564988 SCAPERQ9BY12 1400 aa37.63■■■■□ 3.61
TM6SF1-206ENST00000564988 DENND4BO75064 1496 aaPredicted RBP37.61■■■■□ 3.61
TM6SF1-206ENST00000564988 CAMSAP2Q08AD1 1489 aa37.6■■■■□ 3.61
TM6SF1-206ENST00000564988 COL17A1Q9UMD9 1497 aaPredicted RBP37.59■■■■□ 3.61
TM6SF1-206ENST00000564988 KIAA1107Q9UPP5 1409 aa37.59■■■■□ 3.61
TM6SF1-206ENST00000564988 ZNF644Q9H582 1327 aaPredicted RBP37.58■■■■□ 3.61
TM6SF1-206ENST00000564988 PTPN23Q9H3S7 1636 aa37.56■■■■□ 3.6
TM6SF1-206ENST00000564988 SYCP2Q9BX26 1530 aa37.56■■■■□ 3.6
TM6SF1-206ENST00000564988 POGZQ7Z3K3 1410 aa37.53■■■■□ 3.6
TM6SF1-206ENST00000564988 ARHGEF12Q9NZN5 1544 aa37.53■■■■□ 3.6
TM6SF1-206ENST00000564988 TCOF1Q13428 1488 aaKnown RBP37.52■■■■□ 3.6
TM6SF1-206ENST00000564988 RAPGEF3O95398 923 aa37.5■■■■□ 3.59
TM6SF1-206ENST00000564988 ZNF518AQ6AHZ1 1483 aa37.5■■■■□ 3.59
TM6SF1-206ENST00000564988 HNRNPMP52272 730 aaKnown RBP eCLIP37.49■■■■□ 3.59
TM6SF1-206ENST00000564988 RICTORQ6R327 1708 aa37.49■■■■□ 3.59
TM6SF1-206ENST00000564988 FRMPD1Q5SYB0 1578 aa37.48■■■■□ 3.59
TM6SF1-206ENST00000564988 MBD5Q9P267 1494 aa37.46■■■■□ 3.59
TM6SF1-206ENST00000564988 TRAPPC8Q9Y2L5 1435 aa37.46■■■■□ 3.59
TM6SF1-206ENST00000564988 ARHGEF5Q12774 1597 aa37.42■■■■□ 3.58
TM6SF1-206ENST00000564988 RSPH4AQ5TD94 716 aa37.42■■■■□ 3.58
TM6SF1-206ENST00000564988 RRBP1Q9P2E9 1410 aaKnown RBP37.41■■■■□ 3.58
TM6SF1-206ENST00000564988 KDM5CP41229 1560 aa37.41■■■■□ 3.58
TM6SF1-206ENST00000564988 CCDC141Q6ZP82 1450 aa37.4■■■■□ 3.58
TM6SF1-206ENST00000564988 FAM50AQ14320 339 aaKnown RBP37.4■■■■□ 3.58
TM6SF1-206ENST00000564988 AFAP1Q8N556 730 aa37.4■■■■□ 3.58
TM6SF1-206ENST00000564988 ZMYM4Q5VZL5 1548 aa37.4■■■■□ 3.58
TM6SF1-206ENST00000564988 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.36■■■■□ 3.57
TM6SF1-206ENST00000564988 MAGI2Q86UL8 1455 aa37.33■■■■□ 3.57
TM6SF1-206ENST00000564988 HECW2Q9P2P5 1572 aa37.31■■■■□ 3.56
TM6SF1-206ENST00000564988 DNMT1P26358 1616 aaKnown RBP37.31■■■■□ 3.56
TM6SF1-206ENST00000564988 MLH3Q9UHC1 1453 aa37.3■■■■□ 3.56
TM6SF1-206ENST00000564988 SPAG9O60271 1321 aaKnown RBP37.3■■■■□ 3.56
TM6SF1-206ENST00000564988 DAPK1P53355 1430 aa37.27■■■■□ 3.56
TM6SF1-206ENST00000564988 TSPY4P0CV99 314 aa37.27■■■■□ 3.56
TM6SF1-206ENST00000564988 TSPY10P0CW01 314 aa37.27■■■■□ 3.56
TM6SF1-206ENST00000564988 ABCC5O15440 1437 aa37.27■■■■□ 3.56
TM6SF1-206ENST00000564988 MYT1LQ9UL68 1186 aa37.26■■■■□ 3.56
TM6SF1-206ENST00000564988 ZFYVE16Q7Z3T8 1539 aa37.26■■■■□ 3.55
TM6SF1-206ENST00000564988 INO80Q9ULG1 1556 aaPredicted RBP37.24■■■■□ 3.55
TM6SF1-206ENST00000564988 RTEL1-TNFRSF6BF6WH68 1400 aa37.23■■■■□ 3.55
TM6SF1-206ENST00000564988 ATP7AQ04656 1500 aa37.23■■■■□ 3.55
TM6SF1-206ENST00000564988 SHANK2Q9UPX8 1470 aa37.23■■■■□ 3.55
TM6SF1-206ENST00000564988 CROCC2H7BZ55 1655 aa37.22■■■■□ 3.55
TM6SF1-206ENST00000564988 ARHGEF40Q8TER5 1519 aa37.22■■■■□ 3.55
TM6SF1-206ENST00000564988 MAST1Q9Y2H9 1570 aa37.21■■■■□ 3.55
TM6SF1-206ENST00000564988 C9orf84Q5VXU9 1444 aa37.2■■■■□ 3.55
TM6SF1-206ENST00000564988 YEATS2Q9ULM3 1422 aa37.19■■■■□ 3.54
TM6SF1-206ENST00000564988 KIDINS220Q9ULH0 1771 aa37.19■■■■□ 3.54
TM6SF1-206ENST00000564988 ABCA6Q8N139 1617 aa37.13■■■■□ 3.53
TM6SF1-206ENST00000564988 DIP2CQ9Y2E4 1556 aa37.12■■■■□ 3.53
TM6SF1-206ENST00000564988 ATP10AO60312 1499 aa37.1■■■■□ 3.53
TM6SF1-206ENST00000564988 ITGAEP38570 1179 aa37.09■■■■□ 3.53
TM6SF1-206ENST00000564988 PTPRKQ15262 1439 aa37.07■■■■□ 3.52
TM6SF1-206ENST00000564988 PLXNC1O60486 1568 aa37.07■■■■□ 3.52
TM6SF1-206ENST00000564988 CHIC2Q9UKJ5 165 aa37.06■■■■□ 3.52
TM6SF1-206ENST00000564988 ADGRL2O95490 1459 aa37.05■■■■□ 3.52
TM6SF1-206ENST00000564988 ANKRD30AQ9BXX3 1397 aa37.04■■■■□ 3.52
TM6SF1-206ENST00000564988 ADGBQ8N7X0 1667 aa37.04■■■■□ 3.52
TM6SF1-206ENST00000564988 REREQ9P2R6 1566 aa37.02■■■■□ 3.52
TM6SF1-206ENST00000564988 A2MP01023 1474 aa37■■■■□ 3.51
TM6SF1-206ENST00000564988 ROCK1Q13464 1354 aa36.98■■■■□ 3.51
TM6SF1-206ENST00000564988 NCOA1Q15788 1441 aa36.98■■■■□ 3.51
TM6SF1-206ENST00000564988 KIF15Q9NS87 1388 aa36.97■■■■□ 3.51
TM6SF1-206ENST00000564988 DHX29Q7Z478 1369 aaKnown RBP36.94■■■■□ 3.5
TM6SF1-206ENST00000564988 RRP7BPQ9NSQ0 103 aa36.94■■■■□ 3.5
TM6SF1-206ENST00000564988 DUOX2Q9NRD8 1548 aa36.93■■■■□ 3.5
TM6SF1-206ENST00000564988 AGLP35573 1532 aa36.9■■■■□ 3.5
TM6SF1-206ENST00000564988 ARID4BQ4LE39 1312 aaPredicted RBP36.88■■■■□ 3.49
TM6SF1-206ENST00000564988 SIGLEC1Q9BZZ2 1709 aa36.86■■■■□ 3.49
TM6SF1-206ENST00000564988 ERBINQ96RT1 1412 aa36.85■■■■□ 3.49
TM6SF1-206ENST00000564988 EIF2AK4Q9P2K8 1649 aaKnown RBP36.8■■■■□ 3.48
TM6SF1-206ENST00000564988 TRIM26Q12899 539 aaPredicted RBP36.79■■■■□ 3.48
TM6SF1-206ENST00000564988 ANKRD50Q9ULJ7 1429 aa36.78■■■■□ 3.48
TM6SF1-206ENST00000564988 HFM1A2PYH4 1435 aa36.76■■■■□ 3.48
TM6SF1-206ENST00000564988 BCORL1Q5H9F3 1711 aa36.76■■■■□ 3.47
TM6SF1-206ENST00000564988 KIF3BO15066 747 aa36.75■■■■□ 3.47
TM6SF1-206ENST00000564988 NAIPQ13075 1403 aa36.74■■■■□ 3.47
TM6SF1-206ENST00000564988 GCC2Q8IWJ2 1684 aa36.74■■■■□ 3.47
TM6SF1-206ENST00000564988 MLECQ14165 292 aa36.7■■■■□ 3.47
TM6SF1-206ENST00000564988 RNF17Q9BXT8 1623 aaKnown RBP36.67■■■■□ 3.46
TM6SF1-206ENST00000564988 GGT6Q6P531 493 aa36.65■■■■□ 3.46
TM6SF1-206ENST00000564988 ADAMTSL3P82987 1691 aa36.61■■■■□ 3.45
TM6SF1-206ENST00000564988 PPP6R1Q9UPN7 881 aa36.6■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms