RNA–Protein interactions for RNA: ENST00000564757.5

SCAPER-213, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 626 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-213ENST00000564757 ZSWIM6Q9HCJ5 1215 aa9.75□□□□□ -0.85
SCAPER-213ENST00000564757 GPR153Q6NV75 609 aa9.72□□□□□ -0.85
SCAPER-213ENST00000564757 RNF166Q96A37 237 aaPredicted RBP9.72□□□□□ -0.85
SCAPER-213ENST00000564757 ZNF687Q8N1G0 1237 aa9.7□□□□□ -0.86
SCAPER-213ENST00000564757 ARSIQ5FYB1 569 aa9.67□□□□□ -0.86
SCAPER-213ENST00000564757 MYT1LQ9UL68 1186 aa9.67□□□□□ -0.86
SCAPER-213ENST00000564757 NLRP6P59044 892 aa9.66□□□□□ -0.86
SCAPER-213ENST00000564757 FBXO22Q8NEZ5 403 aa9.66□□□□□ -0.86
SCAPER-213ENST00000564757 BCL11BQ9C0K0 894 aaPredicted RBP9.66□□□□□ -0.86
SCAPER-213ENST00000564757 KHSRPQ92945 711 aaKnown RBP eCLIP9.64□□□□□ -0.87
SCAPER-213ENST00000564757 STK24Q9Y6E0 443 aa9.63□□□□□ -0.87
SCAPER-213ENST00000564757 ZNF316A6NFI3 1004 aaPredicted RBP9.61□□□□□ -0.87
SCAPER-213ENST00000564757 MFRPQ9BY79 579 aa9.61□□□□□ -0.87
SCAPER-213ENST00000564757 TAOK2Q9UL54 1235 aa9.61□□□□□ -0.87
SCAPER-213ENST00000564757 PTGER2P43116 358 aa9.58□□□□□ -0.88
SCAPER-213ENST00000564757 ANKRD13DQ6ZTN6 518 aa9.58□□□□□ -0.88
SCAPER-213ENST00000564757 STK25O00506 426 aa9.57□□□□□ -0.88
SCAPER-213ENST00000564757 C2orf72A6NCS6 295 aa9.56□□□□□ -0.88
SCAPER-213ENST00000564757 KIF3CO14782 793 aa9.56□□□□□ -0.88
SCAPER-213ENST00000564757 NUDT7P0C024 238 aa9.54□□□□□ -0.88
SCAPER-213ENST00000564757 LSM11P83369 360 aaKnown RBP eCLIP9.54□□□□□ -0.88
SCAPER-213ENST00000564757 ECM2O94769 699 aaPredicted RBP9.53□□□□□ -0.88
SCAPER-213ENST00000564757 LHX6Q9UPM6 363 aa9.49□□□□□ -0.89
SCAPER-213ENST00000564757 PCDHGA4Q9Y5G9 962 aa9.49□□□□□ -0.89
SCAPER-213ENST00000564757 PBX2P40425 430 aa9.48□□□□□ -0.89
SCAPER-213ENST00000564757 POTEEQ6S8J3 1075 aa9.48□□□□□ -0.89
SCAPER-213ENST00000564757 RGL2O15211 777 aa9.47□□□□□ -0.89
SCAPER-213ENST00000564757 SLC34A2O95436 690 aa9.47□□□□□ -0.89
SCAPER-213ENST00000564757 TMC2Q8TDI7 906 aa9.47□□□□□ -0.89
SCAPER-213ENST00000564757 AXIN2Q9Y2T1 843 aa9.47□□□□□ -0.89
SCAPER-213ENST00000564757 PKD2Q13563 968 aa9.43□□□□□ -0.9
SCAPER-213ENST00000564757 PPP1R37O75864 691 aa9.42□□□□□ -0.9
SCAPER-213ENST00000564757 ADGRD1Q6QNK2 874 aa9.37□□□□□ -0.91
SCAPER-213ENST00000564757 PSDA5PKW4 1024 aaPredicted RBP9.36□□□□□ -0.91
SCAPER-213ENST00000564757 ARHGAP33O14559 1287 aa9.36□□□□□ -0.91
SCAPER-213ENST00000564757 KDM4FA0A1W2PPD8 638 aa9.34□□□□□ -0.91
SCAPER-213ENST00000564757 PTCD2Q8WV60 388 aaKnown RBP9.34□□□□□ -0.91
SCAPER-213ENST00000564757 PLA2G2EQ9NZK7 142 aa9.34□□□□□ -0.91
SCAPER-213ENST00000564757 HCSTQ9UBK5 93 aa9.34□□□□□ -0.91
SCAPER-213ENST00000564757 PSEN2P49810 448 aa9.32□□□□□ -0.92
SCAPER-213ENST00000564757 DMRTA1Q5VZB9 504 aa9.32□□□□□ -0.92
SCAPER-213ENST00000564757 PLPP6Q8IY26 295 aa9.32□□□□□ -0.92
SCAPER-213ENST00000564757 FOXK1P85037 733 aa9.31□□□□□ -0.92
SCAPER-213ENST00000564757 TK2O00142 265 aa9.29□□□□□ -0.92
SCAPER-213ENST00000564757 HRO43593 1189 aa9.29□□□□□ -0.92
SCAPER-213ENST00000564757 DSG2Q14126 1118 aa9.28□□□□□ -0.92
SCAPER-213ENST00000564757 PPP4R3BQ5MIZ7 849 aa9.28□□□□□ -0.92
SCAPER-213ENST00000564757 GPHNQ9NQX3 736 aaPredicted RBP9.28□□□□□ -0.92
SCAPER-213ENST00000564757 HS6ST3Q8IZP7 471 aa9.25□□□□□ -0.93
SCAPER-213ENST00000564757 KCTD12Q96CX2 325 aaKnown RBP9.25□□□□□ -0.93
SCAPER-213ENST00000564757 TBC1D12O60347 775 aa9.24□□□□□ -0.93
SCAPER-213ENST00000564757 KCNK17Q96T54 332 aa9.23□□□□□ -0.93
SCAPER-213ENST00000564757 STAC3Q96MF2 364 aa9.21□□□□□ -0.94
SCAPER-213ENST00000564757 UPF1Q92900 1129 aaKnown RBP eCLIP9.2□□□□□ -0.94
SCAPER-213ENST00000564757 KCNH8Q96L42 1107 aa9.2□□□□□ -0.94
SCAPER-213ENST00000564757 CHGAP10645 457 aaKnown RBP9.18□□□□□ -0.94
SCAPER-213ENST00000564757 OXER1Q8TDS5 423 aa9.18□□□□□ -0.94
SCAPER-213ENST00000564757 ZNF454Q8N9F8 522 aa9.17□□□□□ -0.94
SCAPER-213ENST00000564757 VPS9D1Q9Y2B5 631 aa9.16□□□□□ -0.94
SCAPER-213ENST00000564757 PTPN5P54829 565 aa9.14□□□□□ -0.95
SCAPER-213ENST00000564757 NKX1-1Q15270 411 aaPredicted RBP9.14□□□□□ -0.95
SCAPER-213ENST00000564757 CRISPLD2Q9H0B8 497 aa9.14□□□□□ -0.95
SCAPER-213ENST00000564757 PPP1R15BQ5SWA1 713 aa9.13□□□□□ -0.95
SCAPER-213ENST00000564757 BCL2L12Q9HB09 334 aa9.13□□□□□ -0.95
SCAPER-213ENST00000564757 FOSBP53539 338 aa9.11□□□□□ -0.95
SCAPER-213ENST00000564757 SLC4A5Q9BY07 1137 aa9.11□□□□□ -0.95
SCAPER-213ENST00000564757 DNAJC5Q9H3Z4 198 aa9.11□□□□□ -0.95
SCAPER-213ENST00000564757 PTPREP23469 700 aa9.1□□□□□ -0.95
SCAPER-213ENST00000564757 RYDENQ9NUL5 291 aaKnown RBP9.09□□□□□ -0.95
SCAPER-213ENST00000564757 BHMG1C9JSJ3 638 aaPredicted RBP9.08□□□□□ -0.96
SCAPER-213ENST00000564757 THSD4Q6ZMP0 1018 aa9.08□□□□□ -0.96
SCAPER-213ENST00000564757 ZBED2Q9BTP6 218 aa9.08□□□□□ -0.96
SCAPER-213ENST00000564757 NCKAP5LQ9HCH0 1330 aa9.07□□□□□ -0.96
SCAPER-213ENST00000564757 JPH4Q96JJ6 628 aa9.07□□□□□ -0.96
SCAPER-213ENST00000564757 GOLGA8CPA6NN73 597 aa9.05□□□□□ -0.96
SCAPER-213ENST00000564757 EVI5O60447 810 aa9.05□□□□□ -0.96
SCAPER-213ENST00000564757 PDE4AP27815 886 aa9.05□□□□□ -0.96
SCAPER-213ENST00000564757 MRPL50Q8N5N7 158 aaKnown RBP9.05□□□□□ -0.96
SCAPER-213ENST00000564757 AMER1Q5JTC6 1135 aaPredicted RBP9.04□□□□□ -0.96
SCAPER-213ENST00000564757 WNT2BQ93097 391 aa9.04□□□□□ -0.96
SCAPER-213ENST00000564757 ADAM33Q9BZ11 813 aa9.04□□□□□ -0.96
SCAPER-213ENST00000564757 ANO8Q9HCE9 1232 aaPredicted RBP9.04□□□□□ -0.96
SCAPER-213ENST00000564757 IFFO2Q5TF58 517 aa9.03□□□□□ -0.96
SCAPER-213ENST00000564757 ZDHHC16Q969W1 377 aa9.03□□□□□ -0.96
SCAPER-213ENST00000564757 NBPF3Q9H094 633 aa9.01□□□□□ -0.97
SCAPER-213ENST00000564757 A0A0G2JS52 829 aa9□□□□□ -0.97
SCAPER-213ENST00000564757 RGS20O76081 388 aa9□□□□□ -0.97
SCAPER-213ENST00000564757 DDX27Q96GQ7 796 aaKnown RBP9□□□□□ -0.97
SCAPER-213ENST00000564757 LARP6Q9BRS8 491 aaKnown RBP9□□□□□ -0.97
SCAPER-213ENST00000564757 RTN4Q9NQC3 1192 aaKnown RBP9□□□□□ -0.97
SCAPER-213ENST00000564757 MAP3K9P80192 1104 aa8.98□□□□□ -0.97
SCAPER-213ENST00000564757 GTPBP6O43824 516 aaPredicted RBP8.97□□□□□ -0.97
SCAPER-213ENST00000564757 PPP1R3GB7ZBB8 358 aa8.96□□□□□ -0.98
SCAPER-213ENST00000564757 MFSD10Q14728 455 aa8.96□□□□□ -0.98
SCAPER-213ENST00000564757 IRX2Q9BZI1 471 aaPredicted RBP8.96□□□□□ -0.98
SCAPER-213ENST00000564757 PROX2Q3B8N5 592 aa8.95□□□□□ -0.98
SCAPER-213ENST00000564757 EMILIN3Q9NT22 766 aa8.95□□□□□ -0.98
SCAPER-213ENST00000564757 PCDHGA10Q9Y5H3 936 aa8.95□□□□□ -0.98
SCAPER-213ENST00000564757 COL9A1P20849 921 aa8.93□□□□□ -0.98
SCAPER-213ENST00000564757 RABGEF1Q9UJ41 708 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms