RNA–Protein interactions for RNA: ENST00000564470.1

ATP2A1-207, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2A1, Length 467 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-207ENST00000564470 HOXB1P14653 301 aaPredicted RBP8.86□□□□□ -0.99
ATP2A1-207ENST00000564470 HS3ST6Q96QI5 342 aa8.86□□□□□ -0.99
ATP2A1-207ENST00000564470 POTEB3A0JP26 581 aa8.85□□□□□ -0.99
ATP2A1-207ENST00000564470 POTEBQ6S5H4 581 aa8.85□□□□□ -0.99
ATP2A1-207ENST00000564470 ERBB3P21860 1342 aa8.83□□□□□ -1
ATP2A1-207ENST00000564470 CHGAP10645 457 aaKnown RBP8.83□□□□□ -1
ATP2A1-207ENST00000564470 PPP1R37O75864 691 aa8.8□□□□□ -1
ATP2A1-207ENST00000564470 HS6ST3Q8IZP7 471 aa8.8□□□□□ -1
ATP2A1-207ENST00000564470 ZSWIM6Q9HCJ5 1215 aa8.8□□□□□ -1
ATP2A1-207ENST00000564470 C2orf72A6NCS6 295 aa8.79□□□□□ -1
ATP2A1-207ENST00000564470 SPNS2Q8IVW8 549 aa8.79□□□□□ -1
ATP2A1-207ENST00000564470 ARSIQ5FYB1 569 aa8.78□□□□□ -1
ATP2A1-207ENST00000564470 GPR153Q6NV75 609 aa8.78□□□□□ -1
ATP2A1-207ENST00000564470 TMC2Q8TDI7 906 aa8.78□□□□□ -1
ATP2A1-207ENST00000564470 VARS2Q5ST30 1063 aaKnown RBP8.76□□□□□ -1.01
ATP2A1-207ENST00000564470 KIF3CO14782 793 aa8.75□□□□□ -1.01
ATP2A1-207ENST00000564470 KRTAP3-3Q9BYR6 98 aa8.75□□□□□ -1.01
ATP2A1-207ENST00000564470 KRTAP3-2Q9BYR7 98 aa8.75□□□□□ -1.01
ATP2A1-207ENST00000564470 KHSRPQ92945 711 aaKnown RBP eCLIP8.74□□□□□ -1.01
ATP2A1-207ENST00000564470 MMRN1Q13201 1228 aa8.73□□□□□ -1.01
ATP2A1-207ENST00000564470 DCAF8L2P0C7V8 631 aa8.71□□□□□ -1.02
ATP2A1-207ENST00000564470 ZNF687Q8N1G0 1237 aa8.69□□□□□ -1.02
ATP2A1-207ENST00000564470 ZNF316A6NFI3 1004 aaPredicted RBP8.68□□□□□ -1.02
ATP2A1-207ENST00000564470 NKX1-1Q15270 411 aaPredicted RBP8.68□□□□□ -1.02
ATP2A1-207ENST00000564470 NUDT7P0C024 238 aa8.67□□□□□ -1.02
ATP2A1-207ENST00000564470 RYDENQ9NUL5 291 aaKnown RBP8.67□□□□□ -1.02
ATP2A1-207ENST00000564470 PCDHGA4Q9Y5G9 962 aa8.67□□□□□ -1.02
ATP2A1-207ENST00000564470 SLC34A2O95436 690 aa8.66□□□□□ -1.02
ATP2A1-207ENST00000564470 DNAJC5Q9H3Z4 198 aa8.66□□□□□ -1.02
ATP2A1-207ENST00000564470 PLPP6Q8IY26 295 aa8.64□□□□□ -1.03
ATP2A1-207ENST00000564470 GPHNQ9NQX3 736 aaPredicted RBP8.64□□□□□ -1.03
ATP2A1-207ENST00000564470 FOXK1P85037 733 aa8.63□□□□□ -1.03
ATP2A1-207ENST00000564470 LHX6Q9UPM6 363 aa8.62□□□□□ -1.03
ATP2A1-207ENST00000564470 DSG2Q14126 1118 aa8.61□□□□□ -1.03
ATP2A1-207ENST00000564470 ANKRD13DQ6ZTN6 518 aa8.61□□□□□ -1.03
ATP2A1-207ENST00000564470 TBC1D12O60347 775 aa8.59□□□□□ -1.03
ATP2A1-207ENST00000564470 GTPBP6O43824 516 aaPredicted RBP8.58□□□□□ -1.04
ATP2A1-207ENST00000564470 PTCD2Q8WV60 388 aaKnown RBP8.58□□□□□ -1.04
ATP2A1-207ENST00000564470 NISCHQ9Y2I1 1504 aa8.57□□□□□ -1.04
ATP2A1-207ENST00000564470 PDE4AP27815 886 aa8.55□□□□□ -1.04
ATP2A1-207ENST00000564470 MYT1LQ9UL68 1186 aa8.55□□□□□ -1.04
ATP2A1-207ENST00000564470 AXIN2Q9Y2T1 843 aa8.55□□□□□ -1.04
ATP2A1-207ENST00000564470 PSDA5PKW4 1024 aaPredicted RBP8.53□□□□□ -1.04
ATP2A1-207ENST00000564470 LSM11P83369 360 aaKnown RBP eCLIP8.53□□□□□ -1.04
ATP2A1-207ENST00000564470 UPF1Q92900 1129 aaKnown RBP eCLIP8.53□□□□□ -1.04
ATP2A1-207ENST00000564470 RNF166Q96A37 237 aaPredicted RBP8.53□□□□□ -1.04
ATP2A1-207ENST00000564470 CRISPLD2Q9H0B8 497 aa8.53□□□□□ -1.04
ATP2A1-207ENST00000564470 PBX2P40425 430 aa8.52□□□□□ -1.05
ATP2A1-207ENST00000564470 PPP1R15BQ5SWA1 713 aa8.52□□□□□ -1.05
ATP2A1-207ENST00000564470 KDM4FA0A1W2PPD8 638 aa8.51□□□□□ -1.05
ATP2A1-207ENST00000564470 POTEEQ6S8J3 1075 aa8.51□□□□□ -1.05
ATP2A1-207ENST00000564470 LARP6Q9BRS8 491 aaKnown RBP8.51□□□□□ -1.05
ATP2A1-207ENST00000564470 NCKAP5LQ9HCH0 1330 aa8.51□□□□□ -1.05
ATP2A1-207ENST00000564470 PTGER2P43116 358 aa8.5□□□□□ -1.05
ATP2A1-207ENST00000564470 ARHGAP33O14559 1287 aa8.49□□□□□ -1.05
ATP2A1-207ENST00000564470 OXER1Q8TDS5 423 aa8.49□□□□□ -1.05
ATP2A1-207ENST00000564470 PPP4R3BQ5MIZ7 849 aa8.48□□□□□ -1.05
ATP2A1-207ENST00000564470 DDX27Q96GQ7 796 aaKnown RBP8.47□□□□□ -1.05
ATP2A1-207ENST00000564470 PSEN2P49810 448 aa8.46□□□□□ -1.06
ATP2A1-207ENST00000564470 MAP3K9P80192 1104 aa8.43□□□□□ -1.06
ATP2A1-207ENST00000564470 DMRTA1Q5VZB9 504 aa8.43□□□□□ -1.06
ATP2A1-207ENST00000564470 ZNF454Q8N9F8 522 aa8.43□□□□□ -1.06
ATP2A1-207ENST00000564470 BBXQ8WY36 941 aaPredicted RBP8.43□□□□□ -1.06
ATP2A1-207ENST00000564470 EVI5O60447 810 aa8.42□□□□□ -1.06
ATP2A1-207ENST00000564470 ADGRD1Q6QNK2 874 aa8.42□□□□□ -1.06
ATP2A1-207ENST00000564470 CADPS2Q86UW7 1296 aa8.42□□□□□ -1.06
ATP2A1-207ENST00000564470 KCNH8Q96L42 1107 aa8.42□□□□□ -1.06
ATP2A1-207ENST00000564470 STAC3Q96MF2 364 aa8.41□□□□□ -1.06
ATP2A1-207ENST00000564470 KCNK17Q96T54 332 aa8.41□□□□□ -1.06
ATP2A1-207ENST00000564470 MFSD10Q14728 455 aa8.4□□□□□ -1.06
ATP2A1-207ENST00000564470 AMER1Q5JTC6 1135 aaPredicted RBP8.4□□□□□ -1.06
ATP2A1-207ENST00000564470 TK2O00142 265 aa8.39□□□□□ -1.07
ATP2A1-207ENST00000564470 ANO8Q9HCE9 1232 aaPredicted RBP8.38□□□□□ -1.07
ATP2A1-207ENST00000564470 FOSBP53539 338 aa8.37□□□□□ -1.07
ATP2A1-207ENST00000564470 EMILIN3Q9NT22 766 aa8.37□□□□□ -1.07
ATP2A1-207ENST00000564470 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.37□□□□□ -1.07
ATP2A1-207ENST00000564470 SPRYD3Q8NCJ5 442 aa8.36□□□□□ -1.07
ATP2A1-207ENST00000564470 BCL2L12Q9HB09 334 aa8.36□□□□□ -1.07
ATP2A1-207ENST00000564470 RTN4Q9NQC3 1192 aaKnown RBP8.36□□□□□ -1.07
ATP2A1-207ENST00000564470 PTPREP23469 700 aa8.35□□□□□ -1.07
ATP2A1-207ENST00000564470 HRO43593 1189 aa8.34□□□□□ -1.07
ATP2A1-207ENST00000564470 ZDHHC16Q969W1 377 aa8.34□□□□□ -1.07
ATP2A1-207ENST00000564470 JPH4Q96JJ6 628 aa8.33□□□□□ -1.08
ATP2A1-207ENST00000564470 HCSTQ9UBK5 93 aa8.33□□□□□ -1.08
ATP2A1-207ENST00000564470 CFAP44Q96MT7 982 aa8.32□□□□□ -1.08
ATP2A1-207ENST00000564470 VPS9D1Q9Y2B5 631 aa8.32□□□□□ -1.08
ATP2A1-207ENST00000564470 KCTD12Q96CX2 325 aaKnown RBP8.31□□□□□ -1.08
ATP2A1-207ENST00000564470 ADAM33Q9BZ11 813 aa8.31□□□□□ -1.08
ATP2A1-207ENST00000564470 PAXIP1Q6ZW49 1069 aaPredicted RBP8.3□□□□□ -1.08
ATP2A1-207ENST00000564470 DPYSL4O14531 572 aa8.28□□□□□ -1.08
ATP2A1-207ENST00000564470 CAMK2BQ13554 666 aa8.28□□□□□ -1.08
ATP2A1-207ENST00000564470 SLC4A5Q9BY07 1137 aa8.28□□□□□ -1.08
ATP2A1-207ENST00000564470 PCDHGA10Q9Y5H3 936 aa8.28□□□□□ -1.08
ATP2A1-207ENST00000564470 ZBED2Q9BTP6 218 aa8.27□□□□□ -1.09
ATP2A1-207ENST00000564470 GOLGA8CPA6NN73 597 aa8.26□□□□□ -1.09
ATP2A1-207ENST00000564470 PHF14O94880 888 aa8.26□□□□□ -1.09
ATP2A1-207ENST00000564470 TYW1BQ6NUM6 668 aa8.25□□□□□ -1.09
ATP2A1-207ENST00000564470 FBXW7Q969H0 707 aa8.25□□□□□ -1.09
ATP2A1-207ENST00000564470 BHMG1C9JSJ3 638 aaPredicted RBP8.24□□□□□ -1.09
ATP2A1-207ENST00000564470 PTPN5P54829 565 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms