RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 SCAPERQ9BY12 1400 aa24.38■■□□□ 1.49
SPG7-210ENST00000564409 ARID4BQ4LE39 1312 aaPredicted RBP24.37■■□□□ 1.49
SPG7-210ENST00000564409 PCF11O94913 1555 aaKnown RBP24.37■■□□□ 1.49
SPG7-210ENST00000564409 POGZQ7Z3K3 1410 aa24.36■■□□□ 1.49
SPG7-210ENST00000564409 ZFYVE16Q7Z3T8 1539 aa24.35■■□□□ 1.49
SPG7-210ENST00000564409 FYCO1Q9BQS8 1478 aa24.35■■□□□ 1.49
SPG7-210ENST00000564409 PTPRMP28827 1452 aa24.33■■□□□ 1.49
SPG7-210ENST00000564409 ARHGAP5Q13017 1502 aa24.31■■□□□ 1.48
SPG7-210ENST00000564409 ZNF518AQ6AHZ1 1483 aa24.29■■□□□ 1.48
SPG7-210ENST00000564409 MADDQ8WXG6 1647 aa24.28■■□□□ 1.48
SPG7-210ENST00000564409 YEATS2Q9ULM3 1422 aa24.27■■□□□ 1.48
SPG7-210ENST00000564409 CDC42BPBQ9Y5S2 1711 aa24.27■■□□□ 1.48
SPG7-210ENST00000564409 PREX2Q70Z35 1606 aa24.25■■□□□ 1.47
SPG7-210ENST00000564409 ATP10AO60312 1499 aa24.25■■□□□ 1.47
SPG7-210ENST00000564409 KDM5CP41229 1560 aa24.23■■□□□ 1.47
SPG7-210ENST00000564409 C9orf84Q5VXU9 1444 aa24.21■■□□□ 1.47
SPG7-210ENST00000564409 RIMS1Q86UR5 1692 aaKnown RBP24.21■■□□□ 1.47
SPG7-210ENST00000564409 CDC42BPAQ5VT25 1732 aa24.18■■□□□ 1.46
SPG7-210ENST00000564409 SIGLEC1Q9BZZ2 1709 aa24.18■■□□□ 1.46
SPG7-210ENST00000564409 AFAP1Q8N556 730 aa24.17■■□□□ 1.46
SPG7-210ENST00000564409 ABCC1P33527 1531 aa24.16■■□□□ 1.46
SPG7-210ENST00000564409 MLH3Q9UHC1 1453 aa24.15■■□□□ 1.46
SPG7-210ENST00000564409 FER1L4A9Z1Z3 1794 aa24.14■■□□□ 1.46
SPG7-210ENST00000564409 ITSN2Q9NZM3 1697 aa24.14■■□□□ 1.45
SPG7-210ENST00000564409 REREQ9P2R6 1566 aa24.12■■□□□ 1.45
SPG7-210ENST00000564409 ARHGEF12Q9NZN5 1544 aa24.11■■□□□ 1.45
SPG7-210ENST00000564409 ILDR1Q86SU0 546 aaPredicted RBP24.11■■□□□ 1.45
SPG7-210ENST00000564409 MYT1LQ9UL68 1186 aa24.1■■□□□ 1.45
SPG7-210ENST00000564409 CEP162Q5TB80 1403 aa24.1■■□□□ 1.45
SPG7-210ENST00000564409 DIP2CQ9Y2E4 1556 aa24.09■■□□□ 1.45
SPG7-210ENST00000564409 MTUS2Q5JR59 1369 aa24.09■■□□□ 1.45
SPG7-210ENST00000564409 GPATCH8Q9UKJ3 1502 aaKnown RBP24.09■■□□□ 1.45
SPG7-210ENST00000564409 TRAPPC8Q9Y2L5 1435 aa24.09■■□□□ 1.45
SPG7-210ENST00000564409 MLECQ14165 292 aa24.08■■□□□ 1.45
SPG7-210ENST00000564409 LMTK3Q96Q04 1460 aa24.07■■□□□ 1.44
SPG7-210ENST00000564409 PLEKHH2Q8IVE3 1493 aa24.06■■□□□ 1.44
SPG7-210ENST00000564409 ABCA6Q8N139 1617 aa24.05■■□□□ 1.44
SPG7-210ENST00000564409 CCNB3Q8WWL7 1395 aa24.04■■□□□ 1.44
SPG7-210ENST00000564409 SAMD9LQ8IVG5 1584 aa24.04■■□□□ 1.44
SPG7-210ENST00000564409 AGLP35573 1532 aa24.04■■□□□ 1.44
SPG7-210ENST00000564409 KIAA1107Q9UPP5 1409 aa24.03■■□□□ 1.44
SPG7-210ENST00000564409 CFDP1Q9UEE9 299 aaPredicted RBP24.03■■□□□ 1.44
SPG7-210ENST00000564409 KIDINS220Q9ULH0 1771 aa24.03■■□□□ 1.44
SPG7-210ENST00000564409 EHBP1L1Q8N3D4 1523 aa24.02■■□□□ 1.44
SPG7-210ENST00000564409 ZNF777Q9ULD5 760 aaPredicted RBP24.02■■□□□ 1.44
SPG7-210ENST00000564409 SETD1BQ9UPS6 1966 aaKnown RBP24■■□□□ 1.43
SPG7-210ENST00000564409 SYCP2Q9BX26 1530 aa24■■□□□ 1.43
SPG7-210ENST00000564409 SPAG9O60271 1321 aaKnown RBP23.97■■□□□ 1.43
SPG7-210ENST00000564409 HNRNPMP52272 730 aaKnown RBP eCLIP23.95■■□□□ 1.42
SPG7-210ENST00000564409 PLPPR3Q6T4P5 718 aa23.95■■□□□ 1.42
SPG7-210ENST00000564409 PREX1Q8TCU6 1659 aa23.94■■□□□ 1.42
SPG7-210ENST00000564409 ESF1Q9H501 851 aaKnown RBP23.93■■□□□ 1.42
SPG7-210ENST00000564409 TIAM1Q13009 1591 aa23.93■■□□□ 1.42
SPG7-210ENST00000564409 ATP7AQ04656 1500 aa23.91■■□□□ 1.42
SPG7-210ENST00000564409 CNTLNQ9NXG0 1405 aa23.91■■□□□ 1.42
SPG7-210ENST00000564409 INO80Q9ULG1 1556 aaPredicted RBP23.9■■□□□ 1.42
SPG7-210ENST00000564409 SUPT6HQ7KZ85 1726 aaKnown RBP23.89■■□□□ 1.41
SPG7-210ENST00000564409 CEBPAP49715 358 aaPredicted RBP23.87■■□□□ 1.41
SPG7-210ENST00000564409 HSPA2P54652 639 aa23.87■■□□□ 1.41
SPG7-210ENST00000564409 C3P01024 1663 aa23.86■■□□□ 1.41
SPG7-210ENST00000564409 VPS8Q8N3P4 1428 aa23.86■■□□□ 1.41
SPG7-210ENST00000564409 ADGBQ8N7X0 1667 aa23.84■■□□□ 1.41
SPG7-210ENST00000564409 NCOA2Q15596 1464 aa23.84■■□□□ 1.41
SPG7-210ENST00000564409 MBD5Q9P267 1494 aa23.84■■□□□ 1.41
SPG7-210ENST00000564409 LOC105371045A0A1W2PR82 267 aa23.84■■□□□ 1.41
SPG7-210ENST00000564409 MROH2AA6NES4 1674 aa23.83■■□□□ 1.41
SPG7-210ENST00000564409 PLXNC1O60486 1568 aa23.83■■□□□ 1.41
SPG7-210ENST00000564409 A2MP01023 1474 aa23.83■■□□□ 1.41
SPG7-210ENST00000564409 RSPH4AQ5TD94 716 aa23.83■■□□□ 1.41
SPG7-210ENST00000564409 RTEL1-TNFRSF6BF6WH68 1400 aa23.83■■□□□ 1.4
SPG7-210ENST00000564409 UHRF1BP1Q6BDS2 1440 aa23.83■■□□□ 1.4
SPG7-210ENST00000564409 ZNF644Q9H582 1327 aaPredicted RBP23.82■■□□□ 1.4
SPG7-210ENST00000564409 MAP3K1Q13233 1512 aa23.8■■□□□ 1.4
SPG7-210ENST00000564409 PPP6R1Q9UPN7 881 aa23.8■■□□□ 1.4
SPG7-210ENST00000564409 FBXO41Q8TF61 875 aa23.78■■□□□ 1.4
SPG7-210ENST00000564409 LRRC9Q6ZRR7 1453 aa23.77■■□□□ 1.4
SPG7-210ENST00000564409 DMRT2Q9Y5R5 561 aa23.77■■□□□ 1.4
SPG7-210ENST00000564409 NPATQ14207 1427 aa23.76■■□□□ 1.39
SPG7-210ENST00000564409 CCDC141Q6ZP82 1450 aa23.75■■□□□ 1.39
SPG7-210ENST00000564409 CAMSAP2Q08AD1 1489 aa23.75■■□□□ 1.39
SPG7-210ENST00000564409 ZMYM3Q14202 1370 aa23.73■■□□□ 1.39
SPG7-210ENST00000564409 ARHGEF5Q12774 1597 aa23.72■■□□□ 1.39
SPG7-210ENST00000564409 DHX29Q7Z478 1369 aaKnown RBP23.71■■□□□ 1.39
SPG7-210ENST00000564409 STRCQ7RTU9 1775 aa23.7■■□□□ 1.39
SPG7-210ENST00000564409 CLTCQ00610 1675 aaKnown RBP23.7■■□□□ 1.39
SPG7-210ENST00000564409 GGT6Q6P531 493 aa23.69■■□□□ 1.38
SPG7-210ENST00000564409 TSPY4P0CV99 314 aa23.67■■□□□ 1.38
SPG7-210ENST00000564409 TSPY10P0CW01 314 aa23.67■■□□□ 1.38
SPG7-210ENST00000564409 FAM135AQ9P2D6 1515 aa23.66■■□□□ 1.38
SPG7-210ENST00000564409 MIA2Q96PC5 1412 aa23.65■■□□□ 1.38
SPG7-210ENST00000564409 PTPRTO14522 1441 aa23.63■■□□□ 1.37
SPG7-210ENST00000564409 MYOM3Q5VTT5 1437 aa23.62■■□□□ 1.37
SPG7-210ENST00000564409 KANK4Q5T7N3 995 aaPredicted RBP23.62■■□□□ 1.37
SPG7-210ENST00000564409 PTPRKQ15262 1439 aa23.61■■□□□ 1.37
SPG7-210ENST00000564409 APLP2Q06481 763 aa23.61■■□□□ 1.37
SPG7-210ENST00000564409 CERKQ8TCT0 537 aa23.61■■□□□ 1.37
SPG7-210ENST00000564409 KIF3BO15066 747 aa23.6■■□□□ 1.37
SPG7-210ENST00000564409 MAST1Q9Y2H9 1570 aa23.6■■□□□ 1.37
SPG7-210ENST00000564409 ZNF142P52746 1687 aaPredicted RBP23.59■■□□□ 1.37
SPG7-210ENST00000564409 NCOA1Q15788 1441 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms