RNA–Protein interactions for RNA: ENST00000564316.1

STUB1-203, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

TSL 3

Gene STUB1, Length 729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-203ENST00000564316 PREX2Q70Z35 1606 aa21.48■■□□□ 1.03
STUB1-203ENST00000564316 AKNAQ7Z591 1439 aa21.48■■□□□ 1.03
STUB1-203ENST00000564316 COL17A1Q9UMD9 1497 aaPredicted RBP21.46■■□□□ 1.03
STUB1-203ENST00000564316 CFAP74Q9C0B2 1584 aa21.46■■□□□ 1.03
STUB1-203ENST00000564316 CFDP1Q9UEE9 299 aaPredicted RBP21.46■■□□□ 1.03
STUB1-203ENST00000564316 KDM6BO15054 1643 aa21.45■■□□□ 1.02
STUB1-203ENST00000564316 CDC42BPAQ5VT25 1732 aa21.45■■□□□ 1.02
STUB1-203ENST00000564316 CDC42BPBQ9Y5S2 1711 aa21.43■■□□□ 1.02
STUB1-203ENST00000564316 ADGRL1O94910 1474 aa21.42■■□□□ 1.02
STUB1-203ENST00000564316 ZNF777Q9ULD5 760 aaPredicted RBP21.41■■□□□ 1.02
STUB1-203ENST00000564316 ITSN2Q9NZM3 1697 aa21.4■■□□□ 1.02
STUB1-203ENST00000564316 PPARGC1BQ86YN6 1023 aaKnown RBP21.4■■□□□ 1.02
STUB1-203ENST00000564316 MYOM3Q5VTT5 1437 aa21.39■■□□□ 1.02
STUB1-203ENST00000564316 SCAPERQ9BY12 1400 aa21.39■■□□□ 1.02
STUB1-203ENST00000564316 DENND4BO75064 1496 aaPredicted RBP21.39■■□□□ 1.01
STUB1-203ENST00000564316 RAPGEF3O95398 923 aa21.37■■□□□ 1.01
STUB1-203ENST00000564316 SAMD9LQ8IVG5 1584 aa21.36■■□□□ 1.01
STUB1-203ENST00000564316 ABCC1P33527 1531 aa21.36■■□□□ 1.01
STUB1-203ENST00000564316 ZNF644Q9H582 1327 aaPredicted RBP21.35■■□□□ 1.01
STUB1-203ENST00000564316 MIA2Q96PC5 1412 aa21.35■■□□□ 1.01
STUB1-203ENST00000564316 PLEKHH2Q8IVE3 1493 aa21.34■■□□□ 1.01
STUB1-203ENST00000564316 POGZQ7Z3K3 1410 aa21.34■■□□□ 1.01
STUB1-203ENST00000564316 ARHGEF12Q9NZN5 1544 aa21.34■■□□□ 1.01
STUB1-203ENST00000564316 KIAA1107Q9UPP5 1409 aa21.33■■□□□ 1.01
STUB1-203ENST00000564316 FRMPD1Q5SYB0 1578 aa21.31■■□□□ 1
STUB1-203ENST00000564316 CAMSAP2Q08AD1 1489 aa21.31■■□□□ 1
STUB1-203ENST00000564316 FGD6Q6ZV73 1430 aa21.3■■□□□ 1
STUB1-203ENST00000564316 TRAPPC8Q9Y2L5 1435 aa21.3■■□□□ 1
STUB1-203ENST00000564316 SYCP2Q9BX26 1530 aa21.3■■□□□ 1
STUB1-203ENST00000564316 HNRNPMP52272 730 aaKnown RBP eCLIP21.3■■□□□ 1
STUB1-203ENST00000564316 ZNF518AQ6AHZ1 1483 aa21.29■■□□□ 1
STUB1-203ENST00000564316 AFAP1Q8N556 730 aa21.29■■□□□ 1
STUB1-203ENST00000564316 RICTORQ6R327 1708 aa21.28■■□□□ 1
STUB1-203ENST00000564316 MBD5Q9P267 1494 aa21.26■□□□□ 0.99
STUB1-203ENST00000564316 ZMYM4Q5VZL5 1548 aa21.25■□□□□ 0.99
STUB1-203ENST00000564316 KDM5CP41229 1560 aa21.24■□□□□ 0.99
STUB1-203ENST00000564316 TCOF1Q13428 1488 aaKnown RBP21.24■□□□□ 0.99
STUB1-203ENST00000564316 PTPN23Q9H3S7 1636 aa21.23■□□□□ 0.99
STUB1-203ENST00000564316 MAGI2Q86UL8 1455 aa21.21■□□□□ 0.99
STUB1-203ENST00000564316 RSPH4AQ5TD94 716 aa21.21■□□□□ 0.99
STUB1-203ENST00000564316 CCDC141Q6ZP82 1450 aa21.2■□□□□ 0.98
STUB1-203ENST00000564316 MLH3Q9UHC1 1453 aa21.2■□□□□ 0.98
STUB1-203ENST00000564316 ARHGEF5Q12774 1597 aa21.19■□□□□ 0.98
STUB1-203ENST00000564316 SPAG9O60271 1321 aaKnown RBP21.19■□□□□ 0.98
STUB1-203ENST00000564316 YEATS2Q9ULM3 1422 aa21.19■□□□□ 0.98
STUB1-203ENST00000564316 FAM50AQ14320 339 aaKnown RBP21.18■□□□□ 0.98
STUB1-203ENST00000564316 MYT1LQ9UL68 1186 aa21.18■□□□□ 0.98
STUB1-203ENST00000564316 ZFYVE16Q7Z3T8 1539 aa21.18■□□□□ 0.98
STUB1-203ENST00000564316 HECW2Q9P2P5 1572 aa21.17■□□□□ 0.98
STUB1-203ENST00000564316 ARHGEF40Q8TER5 1519 aa21.16■□□□□ 0.98
STUB1-203ENST00000564316 RRBP1Q9P2E9 1410 aaKnown RBP21.14■□□□□ 0.98
STUB1-203ENST00000564316 ABCC5O15440 1437 aa21.13■□□□□ 0.97
STUB1-203ENST00000564316 TSPY4P0CV99 314 aa21.13■□□□□ 0.97
STUB1-203ENST00000564316 TSPY10P0CW01 314 aa21.13■□□□□ 0.97
STUB1-203ENST00000564316 RTEL1-TNFRSF6BF6WH68 1400 aa21.12■□□□□ 0.97
STUB1-203ENST00000564316 ATP7AQ04656 1500 aa21.12■□□□□ 0.97
STUB1-203ENST00000564316 DAPK1P53355 1430 aa21.12■□□□□ 0.97
STUB1-203ENST00000564316 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.11■□□□□ 0.97
STUB1-203ENST00000564316 INO80Q9ULG1 1556 aaPredicted RBP21.11■□□□□ 0.97
STUB1-203ENST00000564316 ATP10AO60312 1499 aa21.1■□□□□ 0.97
STUB1-203ENST00000564316 KIDINS220Q9ULH0 1771 aa21.1■□□□□ 0.97
STUB1-203ENST00000564316 DNMT1P26358 1616 aaKnown RBP21.09■□□□□ 0.97
STUB1-203ENST00000564316 C9orf84Q5VXU9 1444 aa21.09■□□□□ 0.97
STUB1-203ENST00000564316 DIP2CQ9Y2E4 1556 aa21.09■□□□□ 0.97
STUB1-203ENST00000564316 SHANK2Q9UPX8 1470 aa21.08■□□□□ 0.97
STUB1-203ENST00000564316 ABCA6Q8N139 1617 aa21.07■□□□□ 0.96
STUB1-203ENST00000564316 MAST1Q9Y2H9 1570 aa21.07■□□□□ 0.96
STUB1-203ENST00000564316 CROCC2H7BZ55 1655 aa21.02■□□□□ 0.96
STUB1-203ENST00000564316 REREQ9P2R6 1566 aa21.02■□□□□ 0.96
STUB1-203ENST00000564316 CHIC2Q9UKJ5 165 aa21.02■□□□□ 0.96
STUB1-203ENST00000564316 PTPRKQ15262 1439 aa21.02■□□□□ 0.96
STUB1-203ENST00000564316 ARID4BQ4LE39 1312 aaPredicted RBP21.02■□□□□ 0.95
STUB1-203ENST00000564316 A2MP01023 1474 aa21.01■□□□□ 0.95
STUB1-203ENST00000564316 ITGAEP38570 1179 aa21■□□□□ 0.95
STUB1-203ENST00000564316 DHX29Q7Z478 1369 aaKnown RBP20.98■□□□□ 0.95
STUB1-203ENST00000564316 ANKRD30AQ9BXX3 1397 aa20.98■□□□□ 0.95
STUB1-203ENST00000564316 ADGRL2O95490 1459 aa20.98■□□□□ 0.95
STUB1-203ENST00000564316 PLXNC1O60486 1568 aa20.97■□□□□ 0.95
STUB1-203ENST00000564316 SIGLEC1Q9BZZ2 1709 aa20.97■□□□□ 0.95
STUB1-203ENST00000564316 KIF15Q9NS87 1388 aa20.97■□□□□ 0.95
STUB1-203ENST00000564316 NCOA1Q15788 1441 aa20.96■□□□□ 0.95
STUB1-203ENST00000564316 AGLP35573 1532 aa20.96■□□□□ 0.95
STUB1-203ENST00000564316 RRP7BPQ9NSQ0 103 aa20.96■□□□□ 0.95
STUB1-203ENST00000564316 ADGBQ8N7X0 1667 aa20.96■□□□□ 0.95
STUB1-203ENST00000564316 ROCK1Q13464 1354 aa20.93■□□□□ 0.94
STUB1-203ENST00000564316 MLECQ14165 292 aa20.92■□□□□ 0.94
STUB1-203ENST00000564316 DUOX2Q9NRD8 1548 aa20.92■□□□□ 0.94
STUB1-203ENST00000564316 KDM4FA0A1W2PPD8 638 aa20.89■□□□□ 0.93
STUB1-203ENST00000564316 ERBINQ96RT1 1412 aa20.88■□□□□ 0.93
STUB1-203ENST00000564316 BCORL1Q5H9F3 1711 aa20.88■□□□□ 0.93
STUB1-203ENST00000564316 KIF3BO15066 747 aa20.88■□□□□ 0.93
STUB1-203ENST00000564316 GGT6Q6P531 493 aa20.85■□□□□ 0.93
STUB1-203ENST00000564316 ANKRD50Q9ULJ7 1429 aa20.85■□□□□ 0.93
STUB1-203ENST00000564316 ADAMTSL3P82987 1691 aa20.83■□□□□ 0.93
STUB1-203ENST00000564316 EIF2AK4Q9P2K8 1649 aaKnown RBP20.82■□□□□ 0.92
STUB1-203ENST00000564316 MADDQ8WXG6 1647 aa20.8■□□□□ 0.92
STUB1-203ENST00000564316 NAIPQ13075 1403 aa20.79■□□□□ 0.92
STUB1-203ENST00000564316 PPP6R1Q9UPN7 881 aa20.79■□□□□ 0.92
STUB1-203ENST00000564316 HFM1A2PYH4 1435 aa20.78■□□□□ 0.92
STUB1-203ENST00000564316 RNF17Q9BXT8 1623 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms