RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 ARHGAP5Q13017 1502 aa26.12■■□□□ 1.77
RNF40-206ENST00000564260 GPATCH8Q9UKJ3 1502 aaKnown RBP26.12■■□□□ 1.77
RNF40-206ENST00000564260 NCOA2Q15596 1464 aa26.11■■□□□ 1.77
RNF40-206ENST00000564260 COL17A1Q9UMD9 1497 aaPredicted RBP26.09■■□□□ 1.77
RNF40-206ENST00000564260 ITSN2Q9NZM3 1697 aa26.06■■□□□ 1.76
RNF40-206ENST00000564260 DENND4BO75064 1496 aaPredicted RBP26.06■■□□□ 1.76
RNF40-206ENST00000564260 ADGRL1O94910 1474 aa26.06■■□□□ 1.76
RNF40-206ENST00000564260 CDC42BPAQ5VT25 1732 aa26.06■■□□□ 1.76
RNF40-206ENST00000564260 CDC42BPBQ9Y5S2 1711 aa26.05■■□□□ 1.76
RNF40-206ENST00000564260 KANK4Q5T7N3 995 aaPredicted RBP26.05■■□□□ 1.76
RNF40-206ENST00000564260 PLEKHH2Q8IVE3 1493 aa26.04■■□□□ 1.76
RNF40-206ENST00000564260 CFDP1Q9UEE9 299 aaPredicted RBP26.03■■□□□ 1.76
RNF40-206ENST00000564260 KIAA1107Q9UPP5 1409 aa26.01■■□□□ 1.75
RNF40-206ENST00000564260 SCAPERQ9BY12 1400 aa26■■□□□ 1.75
RNF40-206ENST00000564260 POGZQ7Z3K3 1410 aa25.99■■□□□ 1.75
RNF40-206ENST00000564260 ABCC1P33527 1531 aa25.98■■□□□ 1.75
RNF40-206ENST00000564260 ZNF518AQ6AHZ1 1483 aa25.98■■□□□ 1.75
RNF40-206ENST00000564260 MIA2Q96PC5 1412 aa25.98■■□□□ 1.75
RNF40-206ENST00000564260 MAGI2Q86UL8 1455 aa25.98■■□□□ 1.75
RNF40-206ENST00000564260 ZMYM4Q5VZL5 1548 aa25.96■■□□□ 1.75
RNF40-206ENST00000564260 MYOM3Q5VTT5 1437 aa25.96■■□□□ 1.75
RNF40-206ENST00000564260 FRMPD1Q5SYB0 1578 aa25.94■■□□□ 1.74
RNF40-206ENST00000564260 RICTORQ6R327 1708 aa25.94■■□□□ 1.74
RNF40-206ENST00000564260 RAPGEF3O95398 923 aa25.93■■□□□ 1.74
RNF40-206ENST00000564260 SAMD9LQ8IVG5 1584 aa25.93■■□□□ 1.74
RNF40-206ENST00000564260 RSPH4AQ5TD94 716 aa25.91■■□□□ 1.74
RNF40-206ENST00000564260 KDM5CP41229 1560 aa25.9■■□□□ 1.74
RNF40-206ENST00000564260 ZNF777Q9ULD5 760 aaPredicted RBP25.87■■□□□ 1.73
RNF40-206ENST00000564260 ARHGEF12Q9NZN5 1544 aa25.86■■□□□ 1.73
RNF40-206ENST00000564260 MLH3Q9UHC1 1453 aa25.85■■□□□ 1.73
RNF40-206ENST00000564260 SYCP2Q9BX26 1530 aa25.85■■□□□ 1.73
RNF40-206ENST00000564260 CAMSAP2Q08AD1 1489 aa25.84■■□□□ 1.73
RNF40-206ENST00000564260 MBD5Q9P267 1494 aa25.83■■□□□ 1.73
RNF40-206ENST00000564260 ARHGEF40Q8TER5 1519 aa25.83■■□□□ 1.72
RNF40-206ENST00000564260 TRAPPC8Q9Y2L5 1435 aa25.82■■□□□ 1.72
RNF40-206ENST00000564260 FGD6Q6ZV73 1430 aa25.81■■□□□ 1.72
RNF40-206ENST00000564260 ZFYVE16Q7Z3T8 1539 aa25.8■■□□□ 1.72
RNF40-206ENST00000564260 AFAP1Q8N556 730 aa25.8■■□□□ 1.72
RNF40-206ENST00000564260 ARHGEF5Q12774 1597 aa25.8■■□□□ 1.72
RNF40-206ENST00000564260 HECW2Q9P2P5 1572 aa25.8■■□□□ 1.72
RNF40-206ENST00000564260 CCDC141Q6ZP82 1450 aa25.79■■□□□ 1.72
RNF40-206ENST00000564260 TCOF1Q13428 1488 aaKnown RBP25.78■■□□□ 1.72
RNF40-206ENST00000564260 HNRNPMP52272 730 aaKnown RBP eCLIP25.77■■□□□ 1.72
RNF40-206ENST00000564260 ZNF644Q9H582 1327 aaPredicted RBP25.77■■□□□ 1.72
RNF40-206ENST00000564260 RTEL1-TNFRSF6BF6WH68 1400 aa25.77■■□□□ 1.72
RNF40-206ENST00000564260 SPAG9O60271 1321 aaKnown RBP25.74■■□□□ 1.71
RNF40-206ENST00000564260 PTPN23Q9H3S7 1636 aa25.74■■□□□ 1.71
RNF40-206ENST00000564260 REREQ9P2R6 1566 aa25.73■■□□□ 1.71
RNF40-206ENST00000564260 ATP10AO60312 1499 aa25.72■■□□□ 1.71
RNF40-206ENST00000564260 C9orf84Q5VXU9 1444 aa25.71■■□□□ 1.71
RNF40-206ENST00000564260 YEATS2Q9ULM3 1422 aa25.71■■□□□ 1.71
RNF40-206ENST00000564260 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.7■■□□□ 1.71
RNF40-206ENST00000564260 INO80Q9ULG1 1556 aaPredicted RBP25.7■■□□□ 1.71
RNF40-206ENST00000564260 TSPY4P0CV99 314 aa25.69■■□□□ 1.7
RNF40-206ENST00000564260 TSPY10P0CW01 314 aa25.69■■□□□ 1.7
RNF40-206ENST00000564260 ATP7AQ04656 1500 aa25.68■■□□□ 1.7
RNF40-206ENST00000564260 SHANK2Q9UPX8 1470 aa25.67■■□□□ 1.7
RNF40-206ENST00000564260 KIDINS220Q9ULH0 1771 aa25.67■■□□□ 1.7
RNF40-206ENST00000564260 DIP2CQ9Y2E4 1556 aa25.66■■□□□ 1.7
RNF40-206ENST00000564260 MAST1Q9Y2H9 1570 aa25.66■■□□□ 1.7
RNF40-206ENST00000564260 MYT1LQ9UL68 1186 aa25.65■■□□□ 1.7
RNF40-206ENST00000564260 ABCA6Q8N139 1617 aa25.62■■□□□ 1.69
RNF40-206ENST00000564260 AGLP35573 1532 aa25.62■■□□□ 1.69
RNF40-206ENST00000564260 DNMT1P26358 1616 aaKnown RBP25.61■■□□□ 1.69
RNF40-206ENST00000564260 DAPK1P53355 1430 aa25.6■■□□□ 1.69
RNF40-206ENST00000564260 RRBP1Q9P2E9 1410 aaKnown RBP25.6■■□□□ 1.69
RNF40-206ENST00000564260 ABCC5O15440 1437 aa25.59■■□□□ 1.69
RNF40-206ENST00000564260 ADGBQ8N7X0 1667 aa25.56■■□□□ 1.68
RNF40-206ENST00000564260 A2MP01023 1474 aa25.56■■□□□ 1.68
RNF40-206ENST00000564260 PLXNC1O60486 1568 aa25.56■■□□□ 1.68
RNF40-206ENST00000564260 CROCC2H7BZ55 1655 aa25.55■■□□□ 1.68
RNF40-206ENST00000564260 FAM50AQ14320 339 aaKnown RBP25.54■■□□□ 1.68
RNF40-206ENST00000564260 PPARGC1BQ86YN6 1023 aaKnown RBP25.53■■□□□ 1.68
RNF40-206ENST00000564260 ARID4BQ4LE39 1312 aaPredicted RBP25.53■■□□□ 1.68
RNF40-206ENST00000564260 DHX29Q7Z478 1369 aaKnown RBP25.53■■□□□ 1.68
RNF40-206ENST00000564260 ADGRL2O95490 1459 aa25.5■■□□□ 1.67
RNF40-206ENST00000564260 BCORL1Q5H9F3 1711 aa25.5■■□□□ 1.67
RNF40-206ENST00000564260 ANKRD30AQ9BXX3 1397 aa25.49■■□□□ 1.67
RNF40-206ENST00000564260 PPP6R1Q9UPN7 881 aa25.47■■□□□ 1.67
RNF40-206ENST00000564260 ADAMTSL3P82987 1691 aa25.46■■□□□ 1.67
RNF40-206ENST00000564260 KDM4FA0A1W2PPD8 638 aa25.46■■□□□ 1.67
RNF40-206ENST00000564260 DUOX2Q9NRD8 1548 aa25.46■■□□□ 1.67
RNF40-206ENST00000564260 ROCK1Q13464 1354 aa25.45■■□□□ 1.67
RNF40-206ENST00000564260 NCOA1Q15788 1441 aa25.45■■□□□ 1.66
RNF40-206ENST00000564260 SIGLEC1Q9BZZ2 1709 aa25.44■■□□□ 1.66
RNF40-206ENST00000564260 KIF15Q9NS87 1388 aa25.44■■□□□ 1.66
RNF40-206ENST00000564260 ERBINQ96RT1 1412 aa25.43■■□□□ 1.66
RNF40-206ENST00000564260 FAM135AQ9P2D6 1515 aa25.42■■□□□ 1.66
RNF40-206ENST00000564260 EIF2AK4Q9P2K8 1649 aaKnown RBP25.41■■□□□ 1.66
RNF40-206ENST00000564260 CNTLNQ9NXG0 1405 aa25.39■■□□□ 1.66
RNF40-206ENST00000564260 PTPRKQ15262 1439 aa25.35■■□□□ 1.65
RNF40-206ENST00000564260 MADDQ8WXG6 1647 aa25.34■■□□□ 1.65
RNF40-206ENST00000564260 RRP7BPQ9NSQ0 103 aa25.33■■□□□ 1.65
RNF40-206ENST00000564260 CHIC2Q9UKJ5 165 aa25.33■■□□□ 1.65
RNF40-206ENST00000564260 KIF3BO15066 747 aa25.32■■□□□ 1.64
RNF40-206ENST00000564260 ESF1Q9H501 851 aaKnown RBP25.32■■□□□ 1.64
RNF40-206ENST00000564260 RNF17Q9BXT8 1623 aaKnown RBP25.32■■□□□ 1.64
RNF40-206ENST00000564260 MLECQ14165 292 aa25.31■■□□□ 1.64
RNF40-206ENST00000564260 PTPRMP28827 1452 aa25.31■■□□□ 1.64
RNF40-206ENST00000564260 FER1L4A9Z1Z3 1794 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms