RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 EFCAB2Q5VUJ9 269 aa27.38■■□□□ 1.97
CCNF-203ENST00000564236 LRRIQ1Q96JM4 1722 aa27.38■■□□□ 1.97
CCNF-203ENST00000564236 ZFYVE16Q7Z3T8 1539 aa27.37■■□□□ 1.97
CCNF-203ENST00000564236 MYO5CQ9NQX4 1742 aa27.37■■□□□ 1.97
CCNF-203ENST00000564236 PCF11O94913 1555 aaKnown RBP27.35■■□□□ 1.97
CCNF-203ENST00000564236 YEATS2Q9ULM3 1422 aa27.35■■□□□ 1.97
CCNF-203ENST00000564236 FYCO1Q9BQS8 1478 aa27.32■■□□□ 1.96
CCNF-203ENST00000564236 ARID4BQ4LE39 1312 aaPredicted RBP27.32■■□□□ 1.96
CCNF-203ENST00000564236 MADDQ8WXG6 1647 aa27.31■■□□□ 1.96
CCNF-203ENST00000564236 ZNF518AQ6AHZ1 1483 aa27.28■■□□□ 1.96
CCNF-203ENST00000564236 KDM5CP41229 1560 aa27.26■■□□□ 1.96
CCNF-203ENST00000564236 ARHGAP5Q13017 1502 aa27.26■■□□□ 1.96
CCNF-203ENST00000564236 SIGLEC1Q9BZZ2 1709 aa27.26■■□□□ 1.95
CCNF-203ENST00000564236 ATP10AO60312 1499 aa27.25■■□□□ 1.95
CCNF-203ENST00000564236 C9orf84Q5VXU9 1444 aa27.22■■□□□ 1.95
CCNF-203ENST00000564236 PREX2Q70Z35 1606 aa27.21■■□□□ 1.95
CCNF-203ENST00000564236 CDC42BPBQ9Y5S2 1711 aa27.2■■□□□ 1.94
CCNF-203ENST00000564236 MLH3Q9UHC1 1453 aa27.17■■□□□ 1.94
CCNF-203ENST00000564236 RIMS1Q86UR5 1692 aaKnown RBP27.17■■□□□ 1.94
CCNF-203ENST00000564236 ABCC1P33527 1531 aa27.16■■□□□ 1.94
CCNF-203ENST00000564236 AFAP1Q8N556 730 aa27.16■■□□□ 1.94
CCNF-203ENST00000564236 LMTK3Q96Q04 1460 aa27.16■■□□□ 1.94
CCNF-203ENST00000564236 ARHGEF12Q9NZN5 1544 aa27.16■■□□□ 1.94
CCNF-203ENST00000564236 REREQ9P2R6 1566 aa27.15■■□□□ 1.94
CCNF-203ENST00000564236 DIP2CQ9Y2E4 1556 aa27.1■■□□□ 1.93
CCNF-203ENST00000564236 TRAPPC8Q9Y2L5 1435 aa27.1■■□□□ 1.93
CCNF-203ENST00000564236 CDC42BPAQ5VT25 1732 aa27.09■■□□□ 1.93
CCNF-203ENST00000564236 GPATCH8Q9UKJ3 1502 aaKnown RBP27.08■■□□□ 1.93
CCNF-203ENST00000564236 ITSN2Q9NZM3 1697 aa27.07■■□□□ 1.92
CCNF-203ENST00000564236 ILDR1Q86SU0 546 aaPredicted RBP27.06■■□□□ 1.92
CCNF-203ENST00000564236 FER1L4A9Z1Z3 1794 aa27.05■■□□□ 1.92
CCNF-203ENST00000564236 AGLP35573 1532 aa27.05■■□□□ 1.92
CCNF-203ENST00000564236 ABCA6Q8N139 1617 aa27.04■■□□□ 1.92
CCNF-203ENST00000564236 MLECQ14165 292 aa27.03■■□□□ 1.92
CCNF-203ENST00000564236 SAMD9LQ8IVG5 1584 aa27.01■■□□□ 1.92
CCNF-203ENST00000564236 CEP162Q5TB80 1403 aa27.01■■□□□ 1.91
CCNF-203ENST00000564236 KIAA1107Q9UPP5 1409 aa27.01■■□□□ 1.91
CCNF-203ENST00000564236 MTUS2Q5JR59 1369 aa26.97■■□□□ 1.91
CCNF-203ENST00000564236 KIDINS220Q9ULH0 1771 aa26.97■■□□□ 1.91
CCNF-203ENST00000564236 PLEKHH2Q8IVE3 1493 aa26.97■■□□□ 1.91
CCNF-203ENST00000564236 SYCP2Q9BX26 1530 aa26.95■■□□□ 1.91
CCNF-203ENST00000564236 CCNB3Q8WWL7 1395 aa26.95■■□□□ 1.9
CCNF-203ENST00000564236 EHBP1L1Q8N3D4 1523 aa26.94■■□□□ 1.9
CCNF-203ENST00000564236 MYT1LQ9UL68 1186 aa26.93■■□□□ 1.9
CCNF-203ENST00000564236 CFDP1Q9UEE9 299 aaPredicted RBP26.92■■□□□ 1.9
CCNF-203ENST00000564236 ZNF777Q9ULD5 760 aaPredicted RBP26.9■■□□□ 1.9
CCNF-203ENST00000564236 TIAM1Q13009 1591 aa26.88■■□□□ 1.89
CCNF-203ENST00000564236 HSPA2P54652 639 aa26.88■■□□□ 1.89
CCNF-203ENST00000564236 SPAG9O60271 1321 aaKnown RBP26.88■■□□□ 1.89
CCNF-203ENST00000564236 HNRNPMP52272 730 aaKnown RBP eCLIP26.87■■□□□ 1.89
CCNF-203ENST00000564236 PREX1Q8TCU6 1659 aa26.86■■□□□ 1.89
CCNF-203ENST00000564236 PLPPR3Q6T4P5 718 aa26.86■■□□□ 1.89
CCNF-203ENST00000564236 INO80Q9ULG1 1556 aaPredicted RBP26.86■■□□□ 1.89
CCNF-203ENST00000564236 ATP7AQ04656 1500 aa26.85■■□□□ 1.89
CCNF-203ENST00000564236 CNTLNQ9NXG0 1405 aa26.85■■□□□ 1.89
CCNF-203ENST00000564236 CEBPAP49715 358 aaPredicted RBP26.85■■□□□ 1.89
CCNF-203ENST00000564236 MBD5Q9P267 1494 aa26.83■■□□□ 1.89
CCNF-203ENST00000564236 PLXNC1O60486 1568 aa26.83■■□□□ 1.89
CCNF-203ENST00000564236 FBXO41Q8TF61 875 aa26.79■■□□□ 1.88
CCNF-203ENST00000564236 UHRF1BP1Q6BDS2 1440 aa26.79■■□□□ 1.88
CCNF-203ENST00000564236 C3P01024 1663 aa26.79■■□□□ 1.88
CCNF-203ENST00000564236 A2MP01023 1474 aa26.77■■□□□ 1.88
CCNF-203ENST00000564236 RTEL1-TNFRSF6BF6WH68 1400 aa26.77■■□□□ 1.88
CCNF-203ENST00000564236 VPS8Q8N3P4 1428 aa26.76■■□□□ 1.87
CCNF-203ENST00000564236 ZNF644Q9H582 1327 aaPredicted RBP26.76■■□□□ 1.87
CCNF-203ENST00000564236 NCOA2Q15596 1464 aa26.75■■□□□ 1.87
CCNF-203ENST00000564236 SETD1BQ9UPS6 1966 aaKnown RBP26.75■■□□□ 1.87
CCNF-203ENST00000564236 ESF1Q9H501 851 aaKnown RBP26.75■■□□□ 1.87
CCNF-203ENST00000564236 MROH2AA6NES4 1674 aa26.74■■□□□ 1.87
CCNF-203ENST00000564236 NPATQ14207 1427 aa26.73■■□□□ 1.87
CCNF-203ENST00000564236 SUPT6HQ7KZ85 1726 aaKnown RBP26.72■■□□□ 1.87
CCNF-203ENST00000564236 LOC105371045A0A1W2PR82 267 aa26.69■■□□□ 1.86
CCNF-203ENST00000564236 PPP6R1Q9UPN7 881 aa26.69■■□□□ 1.86
CCNF-203ENST00000564236 ADGBQ8N7X0 1667 aa26.69■■□□□ 1.86
CCNF-203ENST00000564236 MAP3K1Q13233 1512 aa26.69■■□□□ 1.86
CCNF-203ENST00000564236 RSPH4AQ5TD94 716 aa26.68■■□□□ 1.86
CCNF-203ENST00000564236 ZMYM3Q14202 1370 aa26.68■■□□□ 1.86
CCNF-203ENST00000564236 LRRC9Q6ZRR7 1453 aa26.68■■□□□ 1.86
CCNF-203ENST00000564236 CCDC141Q6ZP82 1450 aa26.67■■□□□ 1.86
CCNF-203ENST00000564236 CAMSAP2Q08AD1 1489 aa26.66■■□□□ 1.86
CCNF-203ENST00000564236 DMRT2Q9Y5R5 561 aa26.65■■□□□ 1.86
CCNF-203ENST00000564236 STRCQ7RTU9 1775 aa26.65■■□□□ 1.86
CCNF-203ENST00000564236 DHX29Q7Z478 1369 aaKnown RBP26.64■■□□□ 1.86
CCNF-203ENST00000564236 ARHGEF5Q12774 1597 aa26.61■■□□□ 1.85
CCNF-203ENST00000564236 PTPRTO14522 1441 aa26.6■■□□□ 1.85
CCNF-203ENST00000564236 PTPRKQ15262 1439 aa26.57■■□□□ 1.84
CCNF-203ENST00000564236 NCOA1Q15788 1441 aa26.57■■□□□ 1.84
CCNF-203ENST00000564236 CLTCQ00610 1675 aaKnown RBP26.57■■□□□ 1.84
CCNF-203ENST00000564236 FAM135AQ9P2D6 1515 aa26.57■■□□□ 1.84
CCNF-203ENST00000564236 CERKQ8TCT0 537 aa26.57■■□□□ 1.84
CCNF-203ENST00000564236 GGT6Q6P531 493 aa26.56■■□□□ 1.84
CCNF-203ENST00000564236 MIA2Q96PC5 1412 aa26.53■■□□□ 1.84
CCNF-203ENST00000564236 KANK4Q5T7N3 995 aaPredicted RBP26.52■■□□□ 1.84
CCNF-203ENST00000564236 ZNF142P52746 1687 aaPredicted RBP26.5■■□□□ 1.83
CCNF-203ENST00000564236 MAST1Q9Y2H9 1570 aa26.49■■□□□ 1.83
CCNF-203ENST00000564236 MYOM3Q5VTT5 1437 aa26.48■■□□□ 1.83
CCNF-203ENST00000564236 MYO3AQ8NEV4 1616 aa26.48■■□□□ 1.83
CCNF-203ENST00000564236 TSPY4P0CV99 314 aa26.48■■□□□ 1.83
CCNF-203ENST00000564236 TSPY10P0CW01 314 aa26.48■■□□□ 1.83
CCNF-203ENST00000564236 PLA2R1Q13018 1463 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms