RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 CDC42BPBQ9Y5S2 1711 aa15.39■□□□□ 0.05
UBFD1-203ENST00000564106 POGZQ7Z3K3 1410 aa15.38■□□□□ 0.05
UBFD1-203ENST00000564106 PTPRMP28827 1452 aa15.38■□□□□ 0.05
UBFD1-203ENST00000564106 CASKIN1Q8WXD9 1431 aa15.37■□□□□ 0.05
UBFD1-203ENST00000564106 ZFYVE16Q7Z3T8 1539 aa15.37■□□□□ 0.05
UBFD1-203ENST00000564106 SCAPERQ9BY12 1400 aa15.36■□□□□ 0.05
UBFD1-203ENST00000564106 RIMS1Q86UR5 1692 aaKnown RBP15.36■□□□□ 0.05
UBFD1-203ENST00000564106 ARHGEF12Q9NZN5 1544 aa15.34■□□□□ 0.05
UBFD1-203ENST00000564106 CLIP1P30622 1438 aa15.34■□□□□ 0.05
UBFD1-203ENST00000564106 PREX2Q70Z35 1606 aa15.33■□□□□ 0.04
UBFD1-203ENST00000564106 CDC42BPAQ5VT25 1732 aa15.33■□□□□ 0.04
UBFD1-203ENST00000564106 ARHGAP5Q13017 1502 aa15.33■□□□□ 0.04
UBFD1-203ENST00000564106 FYCO1Q9BQS8 1478 aa15.32■□□□□ 0.04
UBFD1-203ENST00000564106 KDM5CP41229 1560 aa15.31■□□□□ 0.04
UBFD1-203ENST00000564106 ITSN2Q9NZM3 1697 aa15.29■□□□□ 0.04
UBFD1-203ENST00000564106 ABCC1P33527 1531 aa15.29■□□□□ 0.04
UBFD1-203ENST00000564106 CCDC18Q5T9S5 1454 aa15.29■□□□□ 0.04
UBFD1-203ENST00000564106 ARID4BQ4LE39 1312 aaPredicted RBP15.29■□□□□ 0.04
UBFD1-203ENST00000564106 ABCA6Q8N139 1617 aa15.28■□□□□ 0.04
UBFD1-203ENST00000564106 DIP2CQ9Y2E4 1556 aa15.28■□□□□ 0.04
UBFD1-203ENST00000564106 TRAPPC8Q9Y2L5 1435 aa15.27■□□□□ 0.04
UBFD1-203ENST00000564106 AFAP1Q8N556 730 aa15.27■□□□□ 0.04
UBFD1-203ENST00000564106 MAGI2Q86UL8 1455 aa15.27■□□□□ 0.03
UBFD1-203ENST00000564106 FER1L4A9Z1Z3 1794 aa15.26■□□□□ 0.03
UBFD1-203ENST00000564106 EFCAB2Q5VUJ9 269 aa15.26■□□□□ 0.03
UBFD1-203ENST00000564106 SAMD9LQ8IVG5 1584 aa15.26■□□□□ 0.03
UBFD1-203ENST00000564106 LMTK3Q96Q04 1460 aa15.26■□□□□ 0.03
UBFD1-203ENST00000564106 CDK11AQ9UQ88 783 aaPredicted RBP15.25■□□□□ 0.03
UBFD1-203ENST00000564106 MLECQ14165 292 aa15.24■□□□□ 0.03
UBFD1-203ENST00000564106 ATP10AO60312 1499 aa15.23■□□□□ 0.03
UBFD1-203ENST00000564106 ZNF518AQ6AHZ1 1483 aa15.23■□□□□ 0.03
UBFD1-203ENST00000564106 C9orf84Q5VXU9 1444 aa15.23■□□□□ 0.03
UBFD1-203ENST00000564106 KIDINS220Q9ULH0 1771 aa15.23■□□□□ 0.03
UBFD1-203ENST00000564106 GPATCH8Q9UKJ3 1502 aaKnown RBP15.22■□□□□ 0.03
UBFD1-203ENST00000564106 VPS8Q8N3P4 1428 aa15.21■□□□□ 0.03
UBFD1-203ENST00000564106 PLPPR3Q6T4P5 718 aa15.21■□□□□ 0.03
UBFD1-203ENST00000564106 SYCP2Q9BX26 1530 aa15.21■□□□□ 0.03
UBFD1-203ENST00000564106 ILDR1Q86SU0 546 aaPredicted RBP15.2■□□□□ 0.02
UBFD1-203ENST00000564106 MLH3Q9UHC1 1453 aa15.18■□□□□ 0.02
UBFD1-203ENST00000564106 TIAM1Q13009 1591 aa15.18■□□□□ 0.02
UBFD1-203ENST00000564106 REREQ9P2R6 1566 aa15.17■□□□□ 0.02
UBFD1-203ENST00000564106 HSPA2P54652 639 aa15.16■□□□□ 0.02
UBFD1-203ENST00000564106 CEBPAP49715 358 aaPredicted RBP15.15■□□□□ 0.02
UBFD1-203ENST00000564106 INO80Q9ULG1 1556 aaPredicted RBP15.14■□□□□ 0.01
UBFD1-203ENST00000564106 ZNF777Q9ULD5 760 aaPredicted RBP15.13■□□□□ 0.01
UBFD1-203ENST00000564106 ZNF644Q9H582 1327 aaPredicted RBP15.13■□□□□ 0.01
UBFD1-203ENST00000564106 EHBP1L1Q8N3D4 1523 aa15.12■□□□□ 0.01
UBFD1-203ENST00000564106 HNRNPMP52272 730 aaKnown RBP eCLIP15.12■□□□□ 0.013e-6■■■■□ 21.2
UBFD1-203ENST00000564106 C3P01024 1663 aa15.12■□□□□ 0.01
UBFD1-203ENST00000564106 AGLP35573 1532 aa15.11■□□□□ 0.01
UBFD1-203ENST00000564106 SUPT6HQ7KZ85 1726 aaKnown RBP15.1■□□□□ 0.01
UBFD1-203ENST00000564106 MTUS2Q5JR59 1369 aa15.1■□□□□ 0.01
UBFD1-203ENST00000564106 PREX1Q8TCU6 1659 aa15.09■□□□□ 0.01
UBFD1-203ENST00000564106 ATP7AQ04656 1500 aa15.09■□□□□ 0.01
UBFD1-203ENST00000564106 CCNB3Q8WWL7 1395 aa15.09■□□□□ 0.01
UBFD1-203ENST00000564106 MBD5Q9P267 1494 aa15.08■□□□□ 0.01
UBFD1-203ENST00000564106 PLXNC1O60486 1568 aa15.08■□□□□ 0
UBFD1-203ENST00000564106 MYT1LQ9UL68 1186 aa15.08■□□□□ 0
UBFD1-203ENST00000564106 APLP2Q06481 763 aa15.07■□□□□ 0
UBFD1-203ENST00000564106 STRCQ7RTU9 1775 aa15.06■□□□□ 0
UBFD1-203ENST00000564106 TRIM26Q12899 539 aaPredicted RBP15.06■□□□□ 0
UBFD1-203ENST00000564106 CFDP1Q9UEE9 299 aaPredicted RBP15.06■□□□□ 0
UBFD1-203ENST00000564106 KIAA1107Q9UPP5 1409 aa15.06■□□□□ 0
UBFD1-203ENST00000564106 NCOA2Q15596 1464 aa15.06■□□□□ 0
UBFD1-203ENST00000564106 ADGBQ8N7X0 1667 aa15.04■□□□□ -0
UBFD1-203ENST00000564106 SPAG9O60271 1321 aaKnown RBP15.03■□□□□ -0
UBFD1-203ENST00000564106 MAP3K1Q13233 1512 aa15.02■□□□□ -0
UBFD1-203ENST00000564106 CLTCQ00610 1675 aaKnown RBP15.02□□□□□ -0.01
UBFD1-203ENST00000564106 CAMSAP2Q08AD1 1489 aa15.01□□□□□ -0.01
UBFD1-203ENST00000564106 PLEKHH2Q8IVE3 1493 aa15.01□□□□□ -0.01
UBFD1-203ENST00000564106 A2MP01023 1474 aa15.01□□□□□ -0.01
UBFD1-203ENST00000564106 KANK4Q5T7N3 995 aaPredicted RBP15□□□□□ -0.01
UBFD1-203ENST00000564106 LRRC9Q6ZRR7 1453 aa15□□□□□ -0.01
UBFD1-203ENST00000564106 MROH2AA6NES4 1674 aa14.99□□□□□ -0.01
UBFD1-203ENST00000564106 SETD1BQ9UPS6 1966 aaKnown RBP14.96□□□□□ -0.01
UBFD1-203ENST00000564106 UHRF1BP1Q6BDS2 1440 aa14.95□□□□□ -0.02
UBFD1-203ENST00000564106 CCDC141Q6ZP82 1450 aa14.95□□□□□ -0.02
UBFD1-203ENST00000564106 PCGF6Q9BYE7 350 aa14.94□□□□□ -0.02
UBFD1-203ENST00000564106 MYO3AQ8NEV4 1616 aa14.93□□□□□ -0.02
UBFD1-203ENST00000564106 ZMYM3Q14202 1370 aa14.93□□□□□ -0.02
UBFD1-203ENST00000564106 ARHGEF5Q12774 1597 aa14.93□□□□□ -0.02
UBFD1-203ENST00000564106 CNTLNQ9NXG0 1405 aa14.92□□□□□ -0.02
UBFD1-203ENST00000564106 RTEL1-TNFRSF6BF6WH68 1400 aa14.92□□□□□ -0.02
UBFD1-203ENST00000564106 PTPRKQ15262 1439 aa14.92□□□□□ -0.02
UBFD1-203ENST00000564106 ZNF142P52746 1687 aaPredicted RBP14.9□□□□□ -0.02
UBFD1-203ENST00000564106 GGT6Q6P531 493 aa14.9□□□□□ -0.02
UBFD1-203ENST00000564106 FBXO41Q8TF61 875 aa14.9□□□□□ -0.02
UBFD1-203ENST00000564106 DHX29Q7Z478 1369 aaKnown RBP14.89□□□□□ -0.03
UBFD1-203ENST00000564106 NCOA1Q15788 1441 aa14.89□□□□□ -0.03
UBFD1-203ENST00000564106 CAMSAP1Q5T5Y3 1602 aa14.88□□□□□ -0.03
UBFD1-203ENST00000564106 NPATQ14207 1427 aa14.88□□□□□ -0.03
UBFD1-203ENST00000564106 MAST1Q9Y2H9 1570 aa14.87□□□□□ -0.03
UBFD1-203ENST00000564106 MROH1Q8NDA8 1641 aa14.87□□□□□ -0.03
UBFD1-203ENST00000564106 CEP170BQ9Y4F5 1589 aaPredicted RBP14.86□□□□□ -0.03
UBFD1-203ENST00000564106 MYOM3Q5VTT5 1437 aa14.86□□□□□ -0.03
UBFD1-203ENST00000564106 ESF1Q9H501 851 aaKnown RBP14.86□□□□□ -0.03
UBFD1-203ENST00000564106 LTBP4Q8N2S1 1624 aa14.85□□□□□ -0.03
UBFD1-203ENST00000564106 PPARGC1BQ86YN6 1023 aaKnown RBP14.85□□□□□ -0.03
UBFD1-203ENST00000564106 CERKQ8TCT0 537 aa14.84□□□□□ -0.03
UBFD1-203ENST00000564106 RNF17Q9BXT8 1623 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 528.8 ms