RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 PHLDB1Q86UU1 1377 aa23.27■■□□□ 1.32
SCAMP2-203ENST00000563663 SUPT6HQ7KZ85 1726 aaKnown RBP23.27■■□□□ 1.31
SCAMP2-203ENST00000563663 NCOA2Q15596 1464 aa23.25■■□□□ 1.31
SCAMP2-203ENST00000563663 AKNAQ7Z591 1439 aa23.25■■□□□ 1.31
SCAMP2-203ENST00000563663 RICTORQ6R327 1708 aa23.24■■□□□ 1.31
SCAMP2-203ENST00000563663 ARHGAP5Q13017 1502 aa23.24■■□□□ 1.31
SCAMP2-203ENST00000563663 SAMD9LQ8IVG5 1584 aa23.2■■□□□ 1.3
SCAMP2-203ENST00000563663 ITSN2Q9NZM3 1697 aa23.19■■□□□ 1.3
SCAMP2-203ENST00000563663 ABCC1P33527 1531 aa23.19■■□□□ 1.3
SCAMP2-203ENST00000563663 ADGRL1O94910 1474 aa23.18■■□□□ 1.3
SCAMP2-203ENST00000563663 ARHGEF12Q9NZN5 1544 aa23.17■■□□□ 1.3
SCAMP2-203ENST00000563663 CCNB3Q8WWL7 1395 aa23.15■■□□□ 1.3
SCAMP2-203ENST00000563663 EFCAB2Q5VUJ9 269 aa23.15■■□□□ 1.3
SCAMP2-203ENST00000563663 POGZQ7Z3K3 1410 aa23.14■■□□□ 1.3
SCAMP2-203ENST00000563663 DENND4BO75064 1496 aaPredicted RBP23.14■■□□□ 1.3
SCAMP2-203ENST00000563663 ZMYM4Q5VZL5 1548 aa23.14■■□□□ 1.29
SCAMP2-203ENST00000563663 SCAPERQ9BY12 1400 aa23.13■■□□□ 1.29
SCAMP2-203ENST00000563663 RAPGEF3O95398 923 aa23.13■■□□□ 1.29
SCAMP2-203ENST00000563663 KDM5CP41229 1560 aa23.11■■□□□ 1.29
SCAMP2-203ENST00000563663 SYCP2Q9BX26 1530 aa23.09■■□□□ 1.29
SCAMP2-203ENST00000563663 TRAPPC8Q9Y2L5 1435 aa23.07■■□□□ 1.28
SCAMP2-203ENST00000563663 MYOM3Q5VTT5 1437 aa23.06■■□□□ 1.28
SCAMP2-203ENST00000563663 KIAA1107Q9UPP5 1409 aa23.06■■□□□ 1.28
SCAMP2-203ENST00000563663 CFDP1Q9UEE9 299 aaPredicted RBP23.06■■□□□ 1.28
SCAMP2-203ENST00000563663 APLP2Q06481 763 aa23.05■■□□□ 1.28
SCAMP2-203ENST00000563663 ARHGEF40Q8TER5 1519 aa23.05■■□□□ 1.28
SCAMP2-203ENST00000563663 ZNF518AQ6AHZ1 1483 aa23.05■■□□□ 1.28
SCAMP2-203ENST00000563663 ZNF644Q9H582 1327 aaPredicted RBP23.04■■□□□ 1.28
SCAMP2-203ENST00000563663 MBD5Q9P267 1494 aa23.04■■□□□ 1.28
SCAMP2-203ENST00000563663 CAMSAP2Q08AD1 1489 aa23.03■■□□□ 1.28
SCAMP2-203ENST00000563663 PLEKHH2Q8IVE3 1493 aa23.02■■□□□ 1.28
SCAMP2-203ENST00000563663 MIA2Q96PC5 1412 aa23.01■■□□□ 1.27
SCAMP2-203ENST00000563663 SIGLEC1Q9BZZ2 1709 aa23.01■■□□□ 1.27
SCAMP2-203ENST00000563663 YEATS2Q9ULM3 1422 aa23■■□□□ 1.27
SCAMP2-203ENST00000563663 MAGI2Q86UL8 1455 aa23■■□□□ 1.27
SCAMP2-203ENST00000563663 HECW2Q9P2P5 1572 aa23■■□□□ 1.27
SCAMP2-203ENST00000563663 AFAP1Q8N556 730 aa22.99■■□□□ 1.27
SCAMP2-203ENST00000563663 ZNF777Q9ULD5 760 aaPredicted RBP22.99■■□□□ 1.27
SCAMP2-203ENST00000563663 KIDINS220Q9ULH0 1771 aa22.98■■□□□ 1.27
SCAMP2-203ENST00000563663 ZFYVE16Q7Z3T8 1539 aa22.98■■□□□ 1.27
SCAMP2-203ENST00000563663 MLH3Q9UHC1 1453 aa22.97■■□□□ 1.27
SCAMP2-203ENST00000563663 INO80Q9ULG1 1556 aaPredicted RBP22.96■■□□□ 1.27
SCAMP2-203ENST00000563663 ARHGEF5Q12774 1597 aa22.96■■□□□ 1.27
SCAMP2-203ENST00000563663 FGD6Q6ZV73 1430 aa22.96■■□□□ 1.27
SCAMP2-203ENST00000563663 ABCA6Q8N139 1617 aa22.96■■□□□ 1.27
SCAMP2-203ENST00000563663 HNRNPMP52272 730 aaKnown RBP eCLIP22.95■■□□□ 1.26
SCAMP2-203ENST00000563663 PTPN23Q9H3S7 1636 aa22.94■■□□□ 1.26
SCAMP2-203ENST00000563663 DIP2CQ9Y2E4 1556 aa22.94■■□□□ 1.26
SCAMP2-203ENST00000563663 TCOF1Q13428 1488 aaKnown RBP22.94■■□□□ 1.26
SCAMP2-203ENST00000563663 CCDC141Q6ZP82 1450 aa22.9■■□□□ 1.26
SCAMP2-203ENST00000563663 ATP7AQ04656 1500 aa22.89■■□□□ 1.25
SCAMP2-203ENST00000563663 REREQ9P2R6 1566 aa22.88■■□□□ 1.25
SCAMP2-203ENST00000563663 PPARGC1BQ86YN6 1023 aaKnown RBP22.86■■□□□ 1.25
SCAMP2-203ENST00000563663 CROCC2H7BZ55 1655 aa22.86■■□□□ 1.25
SCAMP2-203ENST00000563663 ATP10AO60312 1499 aa22.86■■□□□ 1.25
SCAMP2-203ENST00000563663 DNMT1P26358 1616 aaKnown RBP22.84■■□□□ 1.25
SCAMP2-203ENST00000563663 MAST1Q9Y2H9 1570 aa22.84■■□□□ 1.25
SCAMP2-203ENST00000563663 C9orf84Q5VXU9 1444 aa22.84■■□□□ 1.25
SCAMP2-203ENST00000563663 PLXNC1O60486 1568 aa22.83■■□□□ 1.25
SCAMP2-203ENST00000563663 ADGBQ8N7X0 1667 aa22.82■■□□□ 1.24
SCAMP2-203ENST00000563663 RTEL1-TNFRSF6BF6WH68 1400 aa22.82■■□□□ 1.24
SCAMP2-203ENST00000563663 SPAG9O60271 1321 aaKnown RBP22.82■■□□□ 1.24
SCAMP2-203ENST00000563663 BCORL1Q5H9F3 1711 aa22.81■■□□□ 1.24
SCAMP2-203ENST00000563663 ABCC5O15440 1437 aa22.81■■□□□ 1.24
SCAMP2-203ENST00000563663 KDM4FA0A1W2PPD8 638 aa22.8■■□□□ 1.24
SCAMP2-203ENST00000563663 ADAMTSL3P82987 1691 aa22.8■■□□□ 1.24
SCAMP2-203ENST00000563663 SHANK2Q9UPX8 1470 aa22.78■■□□□ 1.24
SCAMP2-203ENST00000563663 RSPH4AQ5TD94 716 aa22.78■■□□□ 1.24
SCAMP2-203ENST00000563663 AGLP35573 1532 aa22.77■■□□□ 1.24
SCAMP2-203ENST00000563663 DAPK1P53355 1430 aa22.77■■□□□ 1.24
SCAMP2-203ENST00000563663 RRBP1Q9P2E9 1410 aaKnown RBP22.75■■□□□ 1.23
SCAMP2-203ENST00000563663 A2MP01023 1474 aa22.72■■□□□ 1.23
SCAMP2-203ENST00000563663 MADDQ8WXG6 1647 aa22.71■■□□□ 1.23
SCAMP2-203ENST00000563663 PTPRKQ15262 1439 aa22.71■■□□□ 1.23
SCAMP2-203ENST00000563663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.71■■□□□ 1.23
SCAMP2-203ENST00000563663 ADGRL2O95490 1459 aa22.67■■□□□ 1.22
SCAMP2-203ENST00000563663 MYT1LQ9UL68 1186 aa22.66■■□□□ 1.22
SCAMP2-203ENST00000563663 DHX29Q7Z478 1369 aaKnown RBP22.65■■□□□ 1.22
SCAMP2-203ENST00000563663 TSPY4P0CV99 314 aa22.65■■□□□ 1.22
SCAMP2-203ENST00000563663 TSPY10P0CW01 314 aa22.65■■□□□ 1.22
SCAMP2-203ENST00000563663 FAM50AQ14320 339 aaKnown RBP22.65■■□□□ 1.22
SCAMP2-203ENST00000563663 FER1L4A9Z1Z3 1794 aa22.64■■□□□ 1.21
SCAMP2-203ENST00000563663 ARID4BQ4LE39 1312 aaPredicted RBP22.63■■□□□ 1.21
SCAMP2-203ENST00000563663 NCOA1Q15788 1441 aa22.62■■□□□ 1.21
SCAMP2-203ENST00000563663 RIMS1Q86UR5 1692 aaKnown RBP22.61■■□□□ 1.21
SCAMP2-203ENST00000563663 EIF2AK4Q9P2K8 1649 aaKnown RBP22.61■■□□□ 1.21
SCAMP2-203ENST00000563663 DUOX2Q9NRD8 1548 aa22.6■■□□□ 1.21
SCAMP2-203ENST00000563663 RNF17Q9BXT8 1623 aaKnown RBP22.59■■□□□ 1.21
SCAMP2-203ENST00000563663 KIF15Q9NS87 1388 aa22.59■■□□□ 1.21
SCAMP2-203ENST00000563663 MROH1Q8NDA8 1641 aa22.58■■□□□ 1.21
SCAMP2-203ENST00000563663 PTPRMP28827 1452 aa22.58■■□□□ 1.2
SCAMP2-203ENST00000563663 MLECQ14165 292 aa22.55■■□□□ 1.2
SCAMP2-203ENST00000563663 PCGF6Q9BYE7 350 aa22.55■■□□□ 1.2
SCAMP2-203ENST00000563663 CHIC2Q9UKJ5 165 aa22.55■■□□□ 1.2
SCAMP2-203ENST00000563663 ROCK1Q13464 1354 aa22.54■■□□□ 1.2
SCAMP2-203ENST00000563663 ANKRD30AQ9BXX3 1397 aa22.54■■□□□ 1.2
SCAMP2-203ENST00000563663 ERBINQ96RT1 1412 aa22.54■■□□□ 1.2
SCAMP2-203ENST00000563663 DEPDC5O75140 1603 aa22.53■■□□□ 1.2
SCAMP2-203ENST00000563663 RRP7BPQ9NSQ0 103 aa22.52■■□□□ 1.2
SCAMP2-203ENST00000563663 MROH2AA6NES4 1674 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms