RNA–Protein interactions for RNA: ENST00000563589.1

POLR2C-205, Transcript of RNA polymerase II subunit C, humanhuman

TSL 4

Gene POLR2C, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2C-205ENST00000563589 MAGI2Q86UL8 1455 aa12.76□□□□□ -0.37
POLR2C-205ENST00000563589 SIGLEC1Q9BZZ2 1709 aa12.76□□□□□ -0.37
POLR2C-205ENST00000563589 POGZQ7Z3K3 1410 aa12.75□□□□□ -0.37
POLR2C-205ENST00000563589 ARHGAP35Q9NRY4 1499 aa12.74□□□□□ -0.37
POLR2C-205ENST00000563589 LRRIQ1Q96JM4 1722 aa12.74□□□□□ -0.37
POLR2C-205ENST00000563589 LMTK3Q96Q04 1460 aa12.73□□□□□ -0.37
POLR2C-205ENST00000563589 YEATS2Q9ULM3 1422 aa12.72□□□□□ -0.37
POLR2C-205ENST00000563589 PLCH2O75038 1416 aa12.71□□□□□ -0.37
POLR2C-205ENST00000563589 CLIP1P30622 1438 aa12.71□□□□□ -0.37
POLR2C-205ENST00000563589 UBTFP17480 764 aaKnown RBP12.71□□□□□ -0.37
POLR2C-205ENST00000563589 ARHGAP5Q13017 1502 aa12.7□□□□□ -0.38
POLR2C-205ENST00000563589 SCAPERQ9BY12 1400 aa12.7□□□□□ -0.38
POLR2C-205ENST00000563589 EHMT2Q96KQ7 1210 aa12.69□□□□□ -0.38
POLR2C-205ENST00000563589 ATP1B4Q9UN42 357 aaPredicted RBP12.69□□□□□ -0.38
POLR2C-205ENST00000563589 ZNF518AQ6AHZ1 1483 aa12.69□□□□□ -0.38
POLR2C-205ENST00000563589 TROQ12816 1431 aaPredicted RBP12.69□□□□□ -0.38
POLR2C-205ENST00000563589 C9orf84Q5VXU9 1444 aa12.69□□□□□ -0.38
POLR2C-205ENST00000563589 PREX2Q70Z35 1606 aa12.69□□□□□ -0.38
POLR2C-205ENST00000563589 KDM5CP41229 1560 aa12.69□□□□□ -0.38
POLR2C-205ENST00000563589 ARHGEF12Q9NZN5 1544 aa12.67□□□□□ -0.38
POLR2C-205ENST00000563589 PREX1Q8TCU6 1659 aa12.67□□□□□ -0.38
POLR2C-205ENST00000563589 CCDC18Q5T9S5 1454 aa12.67□□□□□ -0.38
POLR2C-205ENST00000563589 CDK11AQ9UQ88 783 aaPredicted RBP12.67□□□□□ -0.38
POLR2C-205ENST00000563589 CDC42BPBQ9Y5S2 1711 aa12.66□□□□□ -0.38
POLR2C-205ENST00000563589 ITSN2Q9NZM3 1697 aa12.66□□□□□ -0.38
POLR2C-205ENST00000563589 ATP10AO60312 1499 aa12.65□□□□□ -0.38
POLR2C-205ENST00000563589 DIP2CQ9Y2E4 1556 aa12.65□□□□□ -0.38
POLR2C-205ENST00000563589 ABCC1P33527 1531 aa12.64□□□□□ -0.39
POLR2C-205ENST00000563589 ABCA6Q8N139 1617 aa12.64□□□□□ -0.39
POLR2C-205ENST00000563589 EFCAB2Q5VUJ9 269 aa12.64□□□□□ -0.39
POLR2C-205ENST00000563589 REREQ9P2R6 1566 aa12.64□□□□□ -0.39
POLR2C-205ENST00000563589 FBXO41Q8TF61 875 aa12.63□□□□□ -0.39
POLR2C-205ENST00000563589 CDC42BPAQ5VT25 1732 aa12.62□□□□□ -0.39
POLR2C-205ENST00000563589 FYCO1Q9BQS8 1478 aa12.62□□□□□ -0.39
POLR2C-205ENST00000563589 MLECQ14165 292 aa12.62□□□□□ -0.39
POLR2C-205ENST00000563589 MSH5O43196 834 aa12.61□□□□□ -0.39
POLR2C-205ENST00000563589 CASKIN1Q8WXD9 1431 aa12.61□□□□□ -0.39
POLR2C-205ENST00000563589 C3P01024 1663 aa12.58□□□□□ -0.4
POLR2C-205ENST00000563589 PPP6R1Q9UPN7 881 aa12.58□□□□□ -0.4
POLR2C-205ENST00000563589 MLH3Q9UHC1 1453 aa12.58□□□□□ -0.4
POLR2C-205ENST00000563589 KIDINS220Q9ULH0 1771 aa12.57□□□□□ -0.4
POLR2C-205ENST00000563589 HSPA2P54652 639 aa12.57□□□□□ -0.4
POLR2C-205ENST00000563589 MYT1LQ9UL68 1186 aa12.57□□□□□ -0.4
POLR2C-205ENST00000563589 AGLP35573 1532 aa12.56□□□□□ -0.4
POLR2C-205ENST00000563589 UHRF1BP1Q6BDS2 1440 aa12.55□□□□□ -0.4
POLR2C-205ENST00000563589 SAMD9LQ8IVG5 1584 aa12.55□□□□□ -0.4
POLR2C-205ENST00000563589 SYCP2Q9BX26 1530 aa12.54□□□□□ -0.4
POLR2C-205ENST00000563589 MROH2AA6NES4 1674 aa12.54□□□□□ -0.4
POLR2C-205ENST00000563589 TRAPPC8Q9Y2L5 1435 aa12.54□□□□□ -0.4
POLR2C-205ENST00000563589 ILDR2Q71H61 639 aa12.53□□□□□ -0.4
POLR2C-205ENST00000563589 STRCQ7RTU9 1775 aa12.52□□□□□ -0.41
POLR2C-205ENST00000563589 PIAS4Q8N2W9 510 aaPredicted RBP12.52□□□□□ -0.41
POLR2C-205ENST00000563589 AFAP1Q8N556 730 aa12.52□□□□□ -0.41
POLR2C-205ENST00000563589 INO80Q9ULG1 1556 aaPredicted RBP12.52□□□□□ -0.41
POLR2C-205ENST00000563589 ATP7AQ04656 1500 aa12.5□□□□□ -0.41
POLR2C-205ENST00000563589 SUPT6HQ7KZ85 1726 aaKnown RBP12.5□□□□□ -0.41
POLR2C-205ENST00000563589 PLEKHH2Q8IVE3 1493 aa12.49□□□□□ -0.41
POLR2C-205ENST00000563589 CNTLNQ9NXG0 1405 aa12.49□□□□□ -0.41
POLR2C-205ENST00000563589 ADRA2BP18089 450 aa12.49□□□□□ -0.41
POLR2C-205ENST00000563589 PLXNC1O60486 1568 aa12.48□□□□□ -0.41
POLR2C-205ENST00000563589 EHBP1L1Q8N3D4 1523 aa12.48□□□□□ -0.41
POLR2C-205ENST00000563589 CEBPAP49715 358 aaPredicted RBP12.48□□□□□ -0.41
POLR2C-205ENST00000563589 ESF1Q9H501 851 aaKnown RBP12.48□□□□□ -0.41
POLR2C-205ENST00000563589 SETD1BQ9UPS6 1966 aaKnown RBP12.48□□□□□ -0.41
POLR2C-205ENST00000563589 ADGBQ8N7X0 1667 aa12.48□□□□□ -0.41
POLR2C-205ENST00000563589 GPATCH8Q9UKJ3 1502 aaKnown RBP12.47□□□□□ -0.41
POLR2C-205ENST00000563589 CLTCQ00610 1675 aaKnown RBP12.47□□□□□ -0.41
POLR2C-205ENST00000563589 TIAM1Q13009 1591 aa12.47□□□□□ -0.41
POLR2C-205ENST00000563589 ZNF142P52746 1687 aaPredicted RBP12.46□□□□□ -0.41
POLR2C-205ENST00000563589 MTUS2Q5JR59 1369 aa12.45□□□□□ -0.42
POLR2C-205ENST00000563589 MYO3AQ8NEV4 1616 aa12.45□□□□□ -0.42
POLR2C-205ENST00000563589 CERKQ8TCT0 537 aa12.45□□□□□ -0.42
POLR2C-205ENST00000563589 ZNF777Q9ULD5 760 aaPredicted RBP12.45□□□□□ -0.42
POLR2C-205ENST00000563589 CCNB3Q8WWL7 1395 aa12.43□□□□□ -0.42
POLR2C-205ENST00000563589 SPAG9O60271 1321 aaKnown RBP12.43□□□□□ -0.42
POLR2C-205ENST00000563589 DMRT2Q9Y5R5 561 aa12.43□□□□□ -0.42
POLR2C-205ENST00000563589 PTPRTO14522 1441 aa12.43□□□□□ -0.42
POLR2C-205ENST00000563589 NPATQ14207 1427 aa12.43□□□□□ -0.42
POLR2C-205ENST00000563589 KIAA1107Q9UPP5 1409 aa12.43□□□□□ -0.42
POLR2C-205ENST00000563589 A2MP01023 1474 aa12.42□□□□□ -0.42
POLR2C-205ENST00000563589 CAMSAP1Q5T5Y3 1602 aa12.41□□□□□ -0.42
POLR2C-205ENST00000563589 NCOA1Q15788 1441 aa12.41□□□□□ -0.42
POLR2C-205ENST00000563589 CEP170BQ9Y4F5 1589 aaPredicted RBP12.39□□□□□ -0.43
POLR2C-205ENST00000563589 CFDP1Q9UEE9 299 aaPredicted RBP12.39□□□□□ -0.43
POLR2C-205ENST00000563589 HNRNPMP52272 730 aaKnown RBP eCLIP12.38□□□□□ -0.43
POLR2C-205ENST00000563589 CEP162Q5TB80 1403 aa12.37□□□□□ -0.43
POLR2C-205ENST00000563589 IQSEC2Q5JU85 1478 aa12.37□□□□□ -0.43
POLR2C-205ENST00000563589 LTBP4Q8N2S1 1624 aa12.37□□□□□ -0.43
POLR2C-205ENST00000563589 FAM135AQ9P2D6 1515 aa12.36□□□□□ -0.43
POLR2C-205ENST00000563589 CAMSAP2Q08AD1 1489 aa12.35□□□□□ -0.43
POLR2C-205ENST00000563589 PLA2R1Q13018 1463 aa12.35□□□□□ -0.43
POLR2C-205ENST00000563589 CCDC141Q6ZP82 1450 aa12.35□□□□□ -0.43
POLR2C-205ENST00000563589 ZMYM3Q14202 1370 aa12.35□□□□□ -0.43
POLR2C-205ENST00000563589 POLR1AO95602 1720 aaPredicted RBP12.35□□□□□ -0.43
POLR2C-205ENST00000563589 KDM5DQ9BY66 1539 aa12.34□□□□□ -0.43
POLR2C-205ENST00000563589 RTEL1-TNFRSF6BF6WH68 1400 aa12.34□□□□□ -0.43
POLR2C-205ENST00000563589 SPATA31D1Q6ZQQ2 1576 aa12.34□□□□□ -0.43
POLR2C-205ENST00000563589 MBD5Q9P267 1494 aa12.34□□□□□ -0.43
POLR2C-205ENST00000563589 PTPRKQ15262 1439 aa12.33□□□□□ -0.44
POLR2C-205ENST00000563589 NCOA2Q15596 1464 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms