RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 POGZQ7Z3K3 1410 aa30.31■■■□□ 2.44
TRADD-203ENST00000563348 MTUS2Q5JR59 1369 aa30.3■■■□□ 2.44
TRADD-203ENST00000563348 MAGI2Q86UL8 1455 aa30.28■■■□□ 2.44
TRADD-203ENST00000563348 ZMYM4Q5VZL5 1548 aa30.27■■■□□ 2.44
TRADD-203ENST00000563348 CDC42BPBQ9Y5S2 1711 aa30.25■■■□□ 2.43
TRADD-203ENST00000563348 AFAP1Q8N556 730 aa30.25■■■□□ 2.43
TRADD-203ENST00000563348 ARID4BQ4LE39 1312 aaPredicted RBP30.24■■■□□ 2.43
TRADD-203ENST00000563348 VPS8Q8N3P4 1428 aa30.23■■■□□ 2.43
TRADD-203ENST00000563348 GPATCH8Q9UKJ3 1502 aaKnown RBP30.23■■■□□ 2.43
TRADD-203ENST00000563348 PREX2Q70Z35 1606 aa30.23■■■□□ 2.43
TRADD-203ENST00000563348 YEATS2Q9ULM3 1422 aa30.22■■■□□ 2.43
TRADD-203ENST00000563348 ARHGEF40Q8TER5 1519 aa30.22■■■□□ 2.43
TRADD-203ENST00000563348 ZFYVE16Q7Z3T8 1539 aa30.2■■■□□ 2.42
TRADD-203ENST00000563348 ZNF518AQ6AHZ1 1483 aa30.19■■■□□ 2.42
TRADD-203ENST00000563348 CCNB3Q8WWL7 1395 aa30.19■■■□□ 2.42
TRADD-203ENST00000563348 ZNF777Q9ULD5 760 aaPredicted RBP30.19■■■□□ 2.42
TRADD-203ENST00000563348 CFDP1Q9UEE9 299 aaPredicted RBP30.18■■■□□ 2.42
TRADD-203ENST00000563348 CDC42BPAQ5VT25 1732 aa30.18■■■□□ 2.42
TRADD-203ENST00000563348 ARHGEF12Q9NZN5 1544 aa30.16■■■□□ 2.42
TRADD-203ENST00000563348 EHBP1L1Q8N3D4 1523 aa30.15■■■□□ 2.42
TRADD-203ENST00000563348 TRAPPC8Q9Y2L5 1435 aa30.13■■■□□ 2.41
TRADD-203ENST00000563348 ABCC1P33527 1531 aa30.12■■■□□ 2.41
TRADD-203ENST00000563348 ATP10AO60312 1499 aa30.12■■■□□ 2.41
TRADD-203ENST00000563348 KDM5CP41229 1560 aa30.11■■■□□ 2.41
TRADD-203ENST00000563348 MYT1LQ9UL68 1186 aa30.11■■■□□ 2.41
TRADD-203ENST00000563348 ADAMTSL3P82987 1691 aa30.08■■■□□ 2.41
TRADD-203ENST00000563348 MLH3Q9UHC1 1453 aa30.08■■■□□ 2.41
TRADD-203ENST00000563348 HNRNPMP52272 730 aaKnown RBP eCLIP30.08■■■□□ 2.41
TRADD-203ENST00000563348 TIAM1Q13009 1591 aa30.07■■■□□ 2.4
TRADD-203ENST00000563348 KIAA1107Q9UPP5 1409 aa30.06■■■□□ 2.4
TRADD-203ENST00000563348 BCORL1Q5H9F3 1711 aa30.06■■■□□ 2.4
TRADD-203ENST00000563348 SAMD9LQ8IVG5 1584 aa30.05■■■□□ 2.4
TRADD-203ENST00000563348 C9orf84Q5VXU9 1444 aa30.05■■■□□ 2.4
TRADD-203ENST00000563348 PLEKHH2Q8IVE3 1493 aa30.04■■■□□ 2.4
TRADD-203ENST00000563348 ITSN2Q9NZM3 1697 aa30.03■■■□□ 2.4
TRADD-203ENST00000563348 MAP3K1Q13233 1512 aa30.01■■■□□ 2.4
TRADD-203ENST00000563348 NCOA2Q15596 1464 aa30.01■■■□□ 2.4
TRADD-203ENST00000563348 LRRC9Q6ZRR7 1453 aa30.01■■■□□ 2.4
TRADD-203ENST00000563348 MLECQ14165 292 aa30.01■■■□□ 2.39
TRADD-203ENST00000563348 HECW2Q9P2P5 1572 aa30.01■■■□□ 2.39
TRADD-203ENST00000563348 PTPRMP28827 1452 aa30■■■□□ 2.39
TRADD-203ENST00000563348 ZNF644Q9H582 1327 aaPredicted RBP30■■■□□ 2.39
TRADD-203ENST00000563348 KANK4Q5T7N3 995 aaPredicted RBP30■■■□□ 2.39
TRADD-203ENST00000563348 SYCP2Q9BX26 1530 aa29.99■■■□□ 2.39
TRADD-203ENST00000563348 SIGLEC1Q9BZZ2 1709 aa29.99■■■□□ 2.39
TRADD-203ENST00000563348 SPAG9O60271 1321 aaKnown RBP29.97■■■□□ 2.39
TRADD-203ENST00000563348 SUPT6HQ7KZ85 1726 aaKnown RBP29.96■■■□□ 2.39
TRADD-203ENST00000563348 MADDQ8WXG6 1647 aa29.96■■■□□ 2.39
TRADD-203ENST00000563348 DIP2CQ9Y2E4 1556 aa29.94■■■□□ 2.38
TRADD-203ENST00000563348 APLP2Q06481 763 aa29.94■■■□□ 2.38
TRADD-203ENST00000563348 REREQ9P2R6 1566 aa29.9■■■□□ 2.38
TRADD-203ENST00000563348 KIDINS220Q9ULH0 1771 aa29.9■■■□□ 2.38
TRADD-203ENST00000563348 MBD5Q9P267 1494 aa29.9■■■□□ 2.38
TRADD-203ENST00000563348 ABCA6Q8N139 1617 aa29.89■■■□□ 2.38
TRADD-203ENST00000563348 RSPH4AQ5TD94 716 aa29.86■■■□□ 2.37
TRADD-203ENST00000563348 AGLP35573 1532 aa29.84■■■□□ 2.37
TRADD-203ENST00000563348 RIMS1Q86UR5 1692 aaKnown RBP29.84■■■□□ 2.37
TRADD-203ENST00000563348 ATP7AQ04656 1500 aa29.81■■■□□ 2.36
TRADD-203ENST00000563348 CAMSAP2Q08AD1 1489 aa29.8■■■□□ 2.36
TRADD-203ENST00000563348 PLPPR3Q6T4P5 718 aa29.79■■■□□ 2.36
TRADD-203ENST00000563348 RTEL1-TNFRSF6BF6WH68 1400 aa29.78■■■□□ 2.36
TRADD-203ENST00000563348 INO80Q9ULG1 1556 aaPredicted RBP29.77■■■□□ 2.36
TRADD-203ENST00000563348 FER1L4A9Z1Z3 1794 aa29.75■■■□□ 2.35
TRADD-203ENST00000563348 MYOM3Q5VTT5 1437 aa29.75■■■□□ 2.35
TRADD-203ENST00000563348 MIA2Q96PC5 1412 aa29.75■■■□□ 2.35
TRADD-203ENST00000563348 CCDC141Q6ZP82 1450 aa29.74■■■□□ 2.35
TRADD-203ENST00000563348 A2MP01023 1474 aa29.74■■■□□ 2.35
TRADD-203ENST00000563348 TSPY4P0CV99 314 aa29.72■■■□□ 2.35
TRADD-203ENST00000563348 TSPY10P0CW01 314 aa29.72■■■□□ 2.35
TRADD-203ENST00000563348 CEBPAP49715 358 aaPredicted RBP29.72■■■□□ 2.35
TRADD-203ENST00000563348 ESF1Q9H501 851 aaKnown RBP29.72■■■□□ 2.35
TRADD-203ENST00000563348 ARHGEF5Q12774 1597 aa29.68■■■□□ 2.34
TRADD-203ENST00000563348 DHX29Q7Z478 1369 aaKnown RBP29.66■■■□□ 2.34
TRADD-203ENST00000563348 PLXNC1O60486 1568 aa29.66■■■□□ 2.34
TRADD-203ENST00000563348 GGT6Q6P531 493 aa29.63■■■□□ 2.33
TRADD-203ENST00000563348 CNTLNQ9NXG0 1405 aa29.62■■■□□ 2.33
TRADD-203ENST00000563348 LMTK3Q96Q04 1460 aa29.62■■■□□ 2.33
TRADD-203ENST00000563348 ADGBQ8N7X0 1667 aa29.61■■■□□ 2.33
TRADD-203ENST00000563348 PPP6R1Q9UPN7 881 aa29.61■■■□□ 2.33
TRADD-203ENST00000563348 ZMYM3Q14202 1370 aa29.55■■■□□ 2.32
TRADD-203ENST00000563348 KIF3BO15066 747 aa29.55■■■□□ 2.32
TRADD-203ENST00000563348 HSPA2P54652 639 aa29.55■■■□□ 2.32
TRADD-203ENST00000563348 FGD6Q6ZV73 1430 aa29.54■■■□□ 2.32
TRADD-203ENST00000563348 SETD1BQ9UPS6 1966 aaKnown RBP29.53■■■□□ 2.32
TRADD-203ENST00000563348 MAST1Q9Y2H9 1570 aa29.51■■■□□ 2.31
TRADD-203ENST00000563348 PTPN23Q9H3S7 1636 aa29.5■■■□□ 2.31
TRADD-203ENST00000563348 C3P01024 1663 aa29.5■■■□□ 2.31
TRADD-203ENST00000563348 TCOF1Q13428 1488 aaKnown RBP29.49■■■□□ 2.31
TRADD-203ENST00000563348 ABCC5O15440 1437 aa29.49■■■□□ 2.31
TRADD-203ENST00000563348 UHRF1BP1Q6BDS2 1440 aa29.45■■■□□ 2.3
TRADD-203ENST00000563348 MROH2AA6NES4 1674 aa29.44■■■□□ 2.3
TRADD-203ENST00000563348 NPATQ14207 1427 aa29.43■■■□□ 2.3
TRADD-203ENST00000563348 PREX1Q8TCU6 1659 aa29.42■■■□□ 2.3
TRADD-203ENST00000563348 DAPK1P53355 1430 aa29.42■■■□□ 2.3
TRADD-203ENST00000563348 SHANK2Q9UPX8 1470 aa29.41■■■□□ 2.3
TRADD-203ENST00000563348 CLTCQ00610 1675 aaKnown RBP29.4■■■□□ 2.3
TRADD-203ENST00000563348 WASHC2CQ9Y4E1 1318 aa29.4■■■□□ 2.3
TRADD-203ENST00000563348 FAM50AQ14320 339 aaKnown RBP29.38■■■□□ 2.29
TRADD-203ENST00000563348 RRP7BPQ9NSQ0 103 aa29.38■■■□□ 2.29
TRADD-203ENST00000563348 PTPRKQ15262 1439 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms