RNA–Protein interactions for RNA: ENST00000563318.1

FANCA-210, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-210ENST00000563318 PREX2Q70Z35 1606 aa19.7■□□□□ 0.74
FANCA-210ENST00000563318 RICTORQ6R327 1708 aa19.7■□□□□ 0.74
FANCA-210ENST00000563318 CDC42BPBQ9Y5S2 1711 aa19.69■□□□□ 0.74
FANCA-210ENST00000563318 EHBP1L1Q8N3D4 1523 aa19.68■□□□□ 0.74
FANCA-210ENST00000563318 TIAM1Q13009 1591 aa19.68■□□□□ 0.74
FANCA-210ENST00000563318 DENND4BO75064 1496 aaPredicted RBP19.67■□□□□ 0.74
FANCA-210ENST00000563318 MAP3K1Q13233 1512 aa19.67■□□□□ 0.74
FANCA-210ENST00000563318 ZMYM4Q5VZL5 1548 aa19.67■□□□□ 0.74
FANCA-210ENST00000563318 PIAS4Q8N2W9 510 aaPredicted RBP19.67■□□□□ 0.74
FANCA-210ENST00000563318 GPATCH8Q9UKJ3 1502 aaKnown RBP19.66■□□□□ 0.74
FANCA-210ENST00000563318 CDC42BPAQ5VT25 1732 aa19.66■□□□□ 0.74
FANCA-210ENST00000563318 RAPGEF3O95398 923 aa19.66■□□□□ 0.74
FANCA-210ENST00000563318 ADGRL1O94910 1474 aa19.66■□□□□ 0.74
FANCA-210ENST00000563318 POGZQ7Z3K3 1410 aa19.65■□□□□ 0.74
FANCA-210ENST00000563318 ARHGAP5Q13017 1502 aa19.63■□□□□ 0.73
FANCA-210ENST00000563318 EFCAB2Q5VUJ9 269 aa19.63■□□□□ 0.73
FANCA-210ENST00000563318 SCAPERQ9BY12 1400 aa19.62■□□□□ 0.73
FANCA-210ENST00000563318 MTUS2Q5JR59 1369 aa19.62■□□□□ 0.73
FANCA-210ENST00000563318 ABCC1P33527 1531 aa19.61■□□□□ 0.73
FANCA-210ENST00000563318 ARHGEF12Q9NZN5 1544 aa19.61■□□□□ 0.73
FANCA-210ENST00000563318 KDM5CP41229 1560 aa19.61■□□□□ 0.73
FANCA-210ENST00000563318 ARHGEF40Q8TER5 1519 aa19.61■□□□□ 0.73
FANCA-210ENST00000563318 LRRC9Q6ZRR7 1453 aa19.6■□□□□ 0.73
FANCA-210ENST00000563318 KDM4FA0A1W2PPD8 638 aa19.59■□□□□ 0.73
FANCA-210ENST00000563318 MAGI2Q86UL8 1455 aa19.58■□□□□ 0.72
FANCA-210ENST00000563318 SAMD9LQ8IVG5 1584 aa19.57■□□□□ 0.72
FANCA-210ENST00000563318 NCOA2Q15596 1464 aa19.56■□□□□ 0.72
FANCA-210ENST00000563318 ZNF518AQ6AHZ1 1483 aa19.55■□□□□ 0.72
FANCA-210ENST00000563318 ITSN2Q9NZM3 1697 aa19.55■□□□□ 0.72
FANCA-210ENST00000563318 YEATS2Q9ULM3 1422 aa19.54■□□□□ 0.72
FANCA-210ENST00000563318 KIAA1107Q9UPP5 1409 aa19.53■□□□□ 0.72
FANCA-210ENST00000563318 TRAPPC8Q9Y2L5 1435 aa19.53■□□□□ 0.72
FANCA-210ENST00000563318 CCNB3Q8WWL7 1395 aa19.53■□□□□ 0.72
FANCA-210ENST00000563318 SUPT6HQ7KZ85 1726 aaKnown RBP19.53■□□□□ 0.72
FANCA-210ENST00000563318 ZFYVE16Q7Z3T8 1539 aa19.52■□□□□ 0.72
FANCA-210ENST00000563318 KANK4Q5T7N3 995 aaPredicted RBP19.52■□□□□ 0.72
FANCA-210ENST00000563318 SIGLEC1Q9BZZ2 1709 aa19.51■□□□□ 0.71
FANCA-210ENST00000563318 MLH3Q9UHC1 1453 aa19.51■□□□□ 0.71
FANCA-210ENST00000563318 AFAP1Q8N556 730 aa19.49■□□□□ 0.71
FANCA-210ENST00000563318 SYCP2Q9BX26 1530 aa19.49■□□□□ 0.71
FANCA-210ENST00000563318 MBD5Q9P267 1494 aa19.48■□□□□ 0.71
FANCA-210ENST00000563318 HECW2Q9P2P5 1572 aa19.48■□□□□ 0.71
FANCA-210ENST00000563318 PLEKHH2Q8IVE3 1493 aa19.48■□□□□ 0.71
FANCA-210ENST00000563318 CFDP1Q9UEE9 299 aaPredicted RBP19.46■□□□□ 0.71
FANCA-210ENST00000563318 REREQ9P2R6 1566 aa19.45■□□□□ 0.7
FANCA-210ENST00000563318 DIP2CQ9Y2E4 1556 aa19.45■□□□□ 0.7
FANCA-210ENST00000563318 PPP4R3CPQ6ZMV5 832 aa19.45■□□□□ 0.7
FANCA-210ENST00000563318 ADAMTSL3P82987 1691 aa19.45■□□□□ 0.7
FANCA-210ENST00000563318 ATP10AO60312 1499 aa19.44■□□□□ 0.7
FANCA-210ENST00000563318 ABCA6Q8N139 1617 aa19.43■□□□□ 0.7
FANCA-210ENST00000563318 KIDINS220Q9ULH0 1771 aa19.43■□□□□ 0.7
FANCA-210ENST00000563318 ZNF644Q9H582 1327 aaPredicted RBP19.43■□□□□ 0.7
FANCA-210ENST00000563318 BCORL1Q5H9F3 1711 aa19.42■□□□□ 0.7
FANCA-210ENST00000563318 INO80Q9ULG1 1556 aaPredicted RBP19.42■□□□□ 0.7
FANCA-210ENST00000563318 C9orf84Q5VXU9 1444 aa19.42■□□□□ 0.7
FANCA-210ENST00000563318 MYOM3Q5VTT5 1437 aa19.4■□□□□ 0.7
FANCA-210ENST00000563318 CAMSAP2Q08AD1 1489 aa19.4■□□□□ 0.7
FANCA-210ENST00000563318 HNRNPMP52272 730 aaKnown RBP eCLIP19.39■□□□□ 0.692e-11■■■■■ 29.1
FANCA-210ENST00000563318 MIA2Q96PC5 1412 aa19.39■□□□□ 0.69
FANCA-210ENST00000563318 ZNF777Q9ULD5 760 aaPredicted RBP19.38■□□□□ 0.69
FANCA-210ENST00000563318 ARHGEF5Q12774 1597 aa19.36■□□□□ 0.69
FANCA-210ENST00000563318 AGLP35573 1532 aa19.36■□□□□ 0.69
FANCA-210ENST00000563318 ATP7AQ04656 1500 aa19.35■□□□□ 0.69
FANCA-210ENST00000563318 PLXNC1O60486 1568 aa19.35■□□□□ 0.69
FANCA-210ENST00000563318 CCDC141Q6ZP82 1450 aa19.34■□□□□ 0.69
FANCA-210ENST00000563318 RTEL1-TNFRSF6BF6WH68 1400 aa19.34■□□□□ 0.69
FANCA-210ENST00000563318 MADDQ8WXG6 1647 aa19.33■□□□□ 0.69
FANCA-210ENST00000563318 SPAG9O60271 1321 aaKnown RBP19.31■□□□□ 0.68
FANCA-210ENST00000563318 PTPRMP28827 1452 aa19.3■□□□□ 0.68
FANCA-210ENST00000563318 TCOF1Q13428 1488 aaKnown RBP19.3■□□□□ 0.68
FANCA-210ENST00000563318 MAST1Q9Y2H9 1570 aa19.28■□□□□ 0.68
FANCA-210ENST00000563318 FGD6Q6ZV73 1430 aa19.28■□□□□ 0.68
FANCA-210ENST00000563318 APLP2Q06481 763 aa19.28■□□□□ 0.68
FANCA-210ENST00000563318 RSPH4AQ5TD94 716 aa19.27■□□□□ 0.68
FANCA-210ENST00000563318 ARID4BQ4LE39 1312 aaPredicted RBP19.25■□□□□ 0.67
FANCA-210ENST00000563318 PTPN23Q9H3S7 1636 aa19.25■□□□□ 0.67
FANCA-210ENST00000563318 A2MP01023 1474 aa19.25■□□□□ 0.67
FANCA-210ENST00000563318 ADGBQ8N7X0 1667 aa19.24■□□□□ 0.67
FANCA-210ENST00000563318 RIMS1Q86UR5 1692 aaKnown RBP19.22■□□□□ 0.67
FANCA-210ENST00000563318 SHANK2Q9UPX8 1470 aa19.22■□□□□ 0.67
FANCA-210ENST00000563318 ABCC5O15440 1437 aa19.21■□□□□ 0.67
FANCA-210ENST00000563318 FER1L4A9Z1Z3 1794 aa19.21■□□□□ 0.67
FANCA-210ENST00000563318 DHX29Q7Z478 1369 aaKnown RBP19.2■□□□□ 0.66
FANCA-210ENST00000563318 DNMT1P26358 1616 aaKnown RBP19.19■□□□□ 0.66
FANCA-210ENST00000563318 CROCC2H7BZ55 1655 aa19.19■□□□□ 0.66
FANCA-210ENST00000563318 DAPK1P53355 1430 aa19.17■□□□□ 0.66
FANCA-210ENST00000563318 MLECQ14165 292 aa19.16■□□□□ 0.66
FANCA-210ENST00000563318 MYT1LQ9UL68 1186 aa19.16■□□□□ 0.66
FANCA-210ENST00000563318 NCBP3Q53F19 620 aaKnown RBP19.14■□□□□ 0.65
FANCA-210ENST00000563318 TSPY4P0CV99 314 aa19.12■□□□□ 0.65
FANCA-210ENST00000563318 TSPY10P0CW01 314 aa19.12■□□□□ 0.65
FANCA-210ENST00000563318 CNTLNQ9NXG0 1405 aa19.11■□□□□ 0.65
FANCA-210ENST00000563318 MROH2AA6NES4 1674 aa19.11■□□□□ 0.65
FANCA-210ENST00000563318 ADGRL2O95490 1459 aa19.1■□□□□ 0.65
FANCA-210ENST00000563318 FAM135AQ9P2D6 1515 aa19.1■□□□□ 0.65
FANCA-210ENST00000563318 LMTK3Q96Q04 1460 aa19.09■□□□□ 0.65
FANCA-210ENST00000563318 RNF17Q9BXT8 1623 aaKnown RBP19.09■□□□□ 0.65
FANCA-210ENST00000563318 EIF2AK4Q9P2K8 1649 aaKnown RBP19.09■□□□□ 0.65
FANCA-210ENST00000563318 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.08■□□□□ 0.65
FANCA-210ENST00000563318 C3P01024 1663 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms