RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 POGZQ7Z3K3 1410 aa22.15■■□□□ 1.14
SPG7-207ENST00000563218 PLCH2O75038 1416 aa22.14■■□□□ 1.14
SPG7-207ENST00000563218 CDC42BPBQ9Y5S2 1711 aa22.14■■□□□ 1.13
SPG7-207ENST00000563218 SCAPERQ9BY12 1400 aa22.13■■□□□ 1.13
SPG7-207ENST00000563218 UBTFP17480 764 aaKnown RBP22.12■■□□□ 1.13
SPG7-207ENST00000563218 FMN1Q68DA7 1419 aa22.12■■□□□ 1.13
SPG7-207ENST00000563218 ATP1B4Q9UN42 357 aaPredicted RBP22.11■■□□□ 1.13
SPG7-207ENST00000563218 MAGI2Q86UL8 1455 aa22.1■■□□□ 1.13
SPG7-207ENST00000563218 PLPPR3Q6T4P5 718 aa22.1■■□□□ 1.13
SPG7-207ENST00000563218 CHIC1Q5VXU3 224 aa22.07■■□□□ 1.12
SPG7-207ENST00000563218 MLECQ14165 292 aa22.06■■□□□ 1.12
SPG7-207ENST00000563218 ARHGAP5Q13017 1502 aa22.06■■□□□ 1.12
SPG7-207ENST00000563218 ARHGEF12Q9NZN5 1544 aa22.06■■□□□ 1.12
SPG7-207ENST00000563218 KDM5CP41229 1560 aa22.05■■□□□ 1.12
SPG7-207ENST00000563218 PREX2Q70Z35 1606 aa22.05■■□□□ 1.12
SPG7-207ENST00000563218 TROQ12816 1431 aaPredicted RBP22.05■■□□□ 1.12
SPG7-207ENST00000563218 PREX1Q8TCU6 1659 aa22.04■■□□□ 1.12
SPG7-207ENST00000563218 CDC42BPAQ5VT25 1732 aa22.03■■□□□ 1.12
SPG7-207ENST00000563218 ABCA6Q8N139 1617 aa22.03■■□□□ 1.12
SPG7-207ENST00000563218 HSPA2P54652 639 aa22.03■■□□□ 1.12
SPG7-207ENST00000563218 ITSN2Q9NZM3 1697 aa22.03■■□□□ 1.12
SPG7-207ENST00000563218 DIP2CQ9Y2E4 1556 aa22.03■■□□□ 1.12
SPG7-207ENST00000563218 ATP10AO60312 1499 aa22.03■■□□□ 1.12
SPG7-207ENST00000563218 C9orf84Q5VXU9 1444 aa22.02■■□□□ 1.12
SPG7-207ENST00000563218 ZNF518AQ6AHZ1 1483 aa21.99■■□□□ 1.11
SPG7-207ENST00000563218 EFCAB2Q5VUJ9 269 aa21.98■■□□□ 1.11
SPG7-207ENST00000563218 ABCC1P33527 1531 aa21.97■■□□□ 1.11
SPG7-207ENST00000563218 CLIP1P30622 1438 aa21.97■■□□□ 1.11
SPG7-207ENST00000563218 C3P01024 1663 aa21.95■■□□□ 1.1
SPG7-207ENST00000563218 STRCQ7RTU9 1775 aa21.94■■□□□ 1.1
SPG7-207ENST00000563218 CDK11AQ9UQ88 783 aaPredicted RBP21.94■■□□□ 1.1
SPG7-207ENST00000563218 KIDINS220Q9ULH0 1771 aa21.94■■□□□ 1.1
SPG7-207ENST00000563218 AFAP1Q8N556 730 aa21.93■■□□□ 1.1
SPG7-207ENST00000563218 REREQ9P2R6 1566 aa21.93■■□□□ 1.1
SPG7-207ENST00000563218 CCDC18Q5T9S5 1454 aa21.91■■□□□ 1.1
SPG7-207ENST00000563218 CASKIN1Q8WXD9 1431 aa21.91■■□□□ 1.1
SPG7-207ENST00000563218 TRAPPC8Q9Y2L5 1435 aa21.89■■□□□ 1.1
SPG7-207ENST00000563218 CEBPAP49715 358 aaPredicted RBP21.89■■□□□ 1.09
SPG7-207ENST00000563218 SAMD9LQ8IVG5 1584 aa21.87■■□□□ 1.09
SPG7-207ENST00000563218 SETD1BQ9UPS6 1966 aaKnown RBP21.87■■□□□ 1.09
SPG7-207ENST00000563218 MLH3Q9UHC1 1453 aa21.86■■□□□ 1.09
SPG7-207ENST00000563218 FYCO1Q9BQS8 1478 aa21.85■■□□□ 1.09
SPG7-207ENST00000563218 MYT1LQ9UL68 1186 aa21.83■■□□□ 1.09
SPG7-207ENST00000563218 SUPT6HQ7KZ85 1726 aaKnown RBP21.83■■□□□ 1.08
SPG7-207ENST00000563218 SYCP2Q9BX26 1530 aa21.82■■□□□ 1.08
SPG7-207ENST00000563218 AGLP35573 1532 aa21.81■■□□□ 1.08
SPG7-207ENST00000563218 UHRF1BP1Q6BDS2 1440 aa21.77■■□□□ 1.08
SPG7-207ENST00000563218 MROH2AA6NES4 1674 aa21.76■■□□□ 1.07
SPG7-207ENST00000563218 INO80Q9ULG1 1556 aaPredicted RBP21.75■■□□□ 1.07
SPG7-207ENST00000563218 SOCS7O14512 581 aa21.75■■□□□ 1.07
SPG7-207ENST00000563218 ILDR2Q71H61 639 aa21.75■■□□□ 1.07
SPG7-207ENST00000563218 GPATCH8Q9UKJ3 1502 aaKnown RBP21.75■■□□□ 1.07
SPG7-207ENST00000563218 DISP3Q9P2K9 1392 aa21.74■■□□□ 1.07
SPG7-207ENST00000563218 CERKQ8TCT0 537 aa21.74■■□□□ 1.07
SPG7-207ENST00000563218 CLTCQ00610 1675 aaKnown RBP21.74■■□□□ 1.07
SPG7-207ENST00000563218 ATP7AQ04656 1500 aa21.71■■□□□ 1.07
SPG7-207ENST00000563218 PLXNC1O60486 1568 aa21.7■■□□□ 1.06
SPG7-207ENST00000563218 ZNF777Q9ULD5 760 aaPredicted RBP21.7■■□□□ 1.06
SPG7-207ENST00000563218 TIAM1Q13009 1591 aa21.69■■□□□ 1.06
SPG7-207ENST00000563218 ADGBQ8N7X0 1667 aa21.66■■□□□ 1.06
SPG7-207ENST00000563218 HNRNPMP52272 730 aaKnown RBP eCLIP21.66■■□□□ 1.065e-11■■■■■ 37.4
SPG7-207ENST00000563218 MYO3AQ8NEV4 1616 aa21.65■■□□□ 1.06
SPG7-207ENST00000563218 ZNF142P52746 1687 aaPredicted RBP21.64■■□□□ 1.05
SPG7-207ENST00000563218 CNTLNQ9NXG0 1405 aa21.63■■□□□ 1.05
SPG7-207ENST00000563218 CAMSAP1Q5T5Y3 1602 aa21.62■■□□□ 1.05
SPG7-207ENST00000563218 SPAG9O60271 1321 aaKnown RBP21.61■■□□□ 1.05
SPG7-207ENST00000563218 LTBP4Q8N2S1 1624 aa21.61■■□□□ 1.05
SPG7-207ENST00000563218 EHBP1L1Q8N3D4 1523 aa21.6■■□□□ 1.05
SPG7-207ENST00000563218 ESF1Q9H501 851 aaKnown RBP21.6■■□□□ 1.05
SPG7-207ENST00000563218 PTPRTO14522 1441 aa21.6■■□□□ 1.05
SPG7-207ENST00000563218 NCOA1Q15788 1441 aa21.6■■□□□ 1.05
SPG7-207ENST00000563218 CCNB3Q8WWL7 1395 aa21.6■■□□□ 1.05
SPG7-207ENST00000563218 A2MP01023 1474 aa21.59■■□□□ 1.05
SPG7-207ENST00000563218 KIAA1107Q9UPP5 1409 aa21.59■■□□□ 1.05
SPG7-207ENST00000563218 PLEKHH2Q8IVE3 1493 aa21.58■■□□□ 1.05
SPG7-207ENST00000563218 MTUS2Q5JR59 1369 aa21.58■■□□□ 1.04
SPG7-207ENST00000563218 CFDP1Q9UEE9 299 aaPredicted RBP21.57■■□□□ 1.04
SPG7-207ENST00000563218 NPATQ14207 1427 aa21.56■■□□□ 1.04
SPG7-207ENST00000563218 ZNF644Q9H582 1327 aaPredicted RBP21.55■■□□□ 1.04
SPG7-207ENST00000563218 DMRT2Q9Y5R5 561 aa21.55■■□□□ 1.04
SPG7-207ENST00000563218 ZMYM3Q14202 1370 aa21.55■■□□□ 1.04
SPG7-207ENST00000563218 CEP170BQ9Y4F5 1589 aaPredicted RBP21.54■■□□□ 1.04
SPG7-207ENST00000563218 MBD5Q9P267 1494 aa21.53■■□□□ 1.04
SPG7-207ENST00000563218 PTPRKQ15262 1439 aa21.51■■□□□ 1.03
SPG7-207ENST00000563218 CEP162Q5TB80 1403 aa21.51■■□□□ 1.03
SPG7-207ENST00000563218 POLR1AO95602 1720 aaPredicted RBP21.48■■□□□ 1.03
SPG7-207ENST00000563218 GGT6Q6P531 493 aa21.47■■□□□ 1.03
SPG7-207ENST00000563218 NCKAP5LQ9HCH0 1330 aa21.47■■□□□ 1.03
SPG7-207ENST00000563218 CAMSAP2Q08AD1 1489 aa21.45■■□□□ 1.03
SPG7-207ENST00000563218 NCOA2Q15596 1464 aa21.45■■□□□ 1.03
SPG7-207ENST00000563218 DNMT1P26358 1616 aaKnown RBP21.45■■□□□ 1.02
SPG7-207ENST00000563218 PLA2R1Q13018 1463 aa21.43■■□□□ 1.02
SPG7-207ENST00000563218 TCOF1Q13428 1488 aaKnown RBP21.43■■□□□ 1.02
SPG7-207ENST00000563218 SPATA31D1Q6ZQQ2 1576 aa21.43■■□□□ 1.02
SPG7-207ENST00000563218 RTEL1-TNFRSF6BF6WH68 1400 aa21.42■■□□□ 1.02
SPG7-207ENST00000563218 IQSEC2Q5JU85 1478 aa21.42■■□□□ 1.02
SPG7-207ENST00000563218 CCDC141Q6ZP82 1450 aa21.42■■□□□ 1.02
SPG7-207ENST00000563218 ZNF335Q9H4Z2 1342 aaPredicted RBP21.4■■□□□ 1.02
SPG7-207ENST00000563218 NEURL4Q96JN8 1562 aa21.39■■□□□ 1.01
SPG7-207ENST00000563218 KDM5DQ9BY66 1539 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms