RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 NCKAP5LQ9HCH0 1330 aa13.39□□□□□ -0.27
KARS-203ENST00000562875 POTEFA5A3E0 1075 aa13.39□□□□□ -0.27
KARS-203ENST00000562875 PDE4AP27815 886 aa13.39□□□□□ -0.27
KARS-203ENST00000562875 L3MBTL3Q96JM7 780 aaPredicted RBP13.38□□□□□ -0.27
KARS-203ENST00000562875 SUPT5HO00267 1087 aaKnown RBP13.37□□□□□ -0.27
KARS-203ENST00000562875 LARP6Q9BRS8 491 aaKnown RBP13.37□□□□□ -0.27
KARS-203ENST00000562875 CRISPLD2Q9H0B8 497 aa13.37□□□□□ -0.27
KARS-203ENST00000562875 TMEM121BQ9BXQ6 578 aaPredicted RBP13.36□□□□□ -0.27
KARS-203ENST00000562875 P3H3Q8IVL6 736 aa13.32□□□□□ -0.28
KARS-203ENST00000562875 MFSD10Q14728 455 aa13.31□□□□□ -0.28
KARS-203ENST00000562875 DDX27Q96GQ7 796 aaKnown RBP13.31□□□□□ -0.28
KARS-203ENST00000562875 GPHNQ9NQX3 736 aaPredicted RBP13.29□□□□□ -0.28
KARS-203ENST00000562875 NBR1Q14596 966 aa13.28□□□□□ -0.28
KARS-203ENST00000562875 TMC2Q8TDI7 906 aa13.28□□□□□ -0.28
KARS-203ENST00000562875 KCNV2Q8TDN2 545 aa13.28□□□□□ -0.28
KARS-203ENST00000562875 E2F4Q16254 413 aa13.27□□□□□ -0.29
KARS-203ENST00000562875 PPP1R15BQ5SWA1 713 aa13.24□□□□□ -0.29
KARS-203ENST00000562875 C2orf72A6NCS6 295 aa13.22□□□□□ -0.29
KARS-203ENST00000562875 C3orf67Q6ZVT6 689 aa13.22□□□□□ -0.29
KARS-203ENST00000562875 DSG2Q14126 1118 aa13.21□□□□□ -0.29
KARS-203ENST00000562875 KIF3CO14782 793 aa13.2□□□□□ -0.3
KARS-203ENST00000562875 TMEM92Q6UXU6 159 aa13.2□□□□□ -0.3
KARS-203ENST00000562875 FOXK1P85037 733 aa13.19□□□□□ -0.3
KARS-203ENST00000562875 CAMK2BQ13554 666 aa13.17□□□□□ -0.3
KARS-203ENST00000562875 ARHGEF1Q92888 912 aaKnown RBP13.17□□□□□ -0.3
KARS-203ENST00000562875 PLPP6Q8IY26 295 aa13.15□□□□□ -0.3
KARS-203ENST00000562875 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.14□□□□□ -0.31
KARS-203ENST00000562875 MYO15BQ96JP2 1530 aa13.1□□□□□ -0.31
KARS-203ENST00000562875 POTEB2H3BUK9 544 aa13.1□□□□□ -0.31
KARS-203ENST00000562875 EMILIN3Q9NT22 766 aa13.09□□□□□ -0.31
KARS-203ENST00000562875 ARIH1Q9Y4X5 557 aaPredicted RBP13.09□□□□□ -0.31
KARS-203ENST00000562875 ABCC9O60706 1549 aa13.08□□□□□ -0.31
KARS-203ENST00000562875 POTEJP0CG39 1038 aa13.08□□□□□ -0.32
KARS-203ENST00000562875 DPYSL4O14531 572 aa13.04□□□□□ -0.32
KARS-203ENST00000562875 SEMA3EO15041 775 aa13.02□□□□□ -0.33
KARS-203ENST00000562875 UPF1Q92900 1129 aaKnown RBP eCLIP13.01□□□□□ -0.33
KARS-203ENST00000562875 MAMSTRQ6ZN01 415 aa13□□□□□ -0.33
KARS-203ENST00000562875 SCUBE2Q9NQ36 999 aa13□□□□□ -0.33
KARS-203ENST00000562875 MAP3K9P80192 1104 aa12.98□□□□□ -0.33
KARS-203ENST00000562875 SCRIBQ14160 1630 aa12.97□□□□□ -0.33
KARS-203ENST00000562875 TESPA1A2RU30 521 aaPredicted RBP12.96□□□□□ -0.33
KARS-203ENST00000562875 SLAIN1Q8ND83 568 aa12.96□□□□□ -0.33
KARS-203ENST00000562875 OXER1Q8TDS5 423 aa12.96□□□□□ -0.33
KARS-203ENST00000562875 SPDYE16A6NNV3 312 aaPredicted RBP12.95□□□□□ -0.34
KARS-203ENST00000562875 TULP1O00294 542 aaPredicted RBP12.94□□□□□ -0.34
KARS-203ENST00000562875 PDIA6Q15084 440 aa12.94□□□□□ -0.34
KARS-203ENST00000562875 TPRNQ4KMQ1 711 aa12.94□□□□□ -0.34
KARS-203ENST00000562875 NACADO15069 1562 aa12.92□□□□□ -0.34
KARS-203ENST00000562875 SLC34A2O95436 690 aa12.92□□□□□ -0.34
KARS-203ENST00000562875 PRKCSHP14314 528 aaPredicted RBP12.91□□□□□ -0.34
KARS-203ENST00000562875 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.9□□□□□ -0.34
KARS-203ENST00000562875 PTCD2Q8WV60 388 aaKnown RBP12.9□□□□□ -0.34
KARS-203ENST00000562875 TBC1D12O60347 775 aa12.89□□□□□ -0.35
KARS-203ENST00000562875 SMYD5Q6GMV2 418 aa12.89□□□□□ -0.35
KARS-203ENST00000562875 LMOD2Q6P5Q4 547 aa12.89□□□□□ -0.35
KARS-203ENST00000562875 MLLT3P42568 568 aaPredicted RBP12.88□□□□□ -0.35
KARS-203ENST00000562875 EVI5O60447 810 aa12.85□□□□□ -0.35
KARS-203ENST00000562875 DOK7Q18PE1 504 aa12.84□□□□□ -0.35
KARS-203ENST00000562875 LHX8Q68G74 356 aa12.84□□□□□ -0.35
KARS-203ENST00000562875 PCDHGA4Q9Y5G9 962 aa12.84□□□□□ -0.35
KARS-203ENST00000562875 ZNF316A6NFI3 1004 aaPredicted RBP12.83□□□□□ -0.36
KARS-203ENST00000562875 RB1CC1Q8TDY2 1594 aa12.82□□□□□ -0.36
KARS-203ENST00000562875 HOXB3P14651 431 aaPredicted RBP12.82□□□□□ -0.36
KARS-203ENST00000562875 OTUD5Q96G74 571 aa12.82□□□□□ -0.36
KARS-203ENST00000562875 GRXCR2A6NFK2 248 aa12.8□□□□□ -0.36
KARS-203ENST00000562875 RIMBP2O15034 1052 aa12.79□□□□□ -0.36
KARS-203ENST00000562875 DDX12PQ92771 950 aa12.79□□□□□ -0.36
KARS-203ENST00000562875 PTGER2P43116 358 aa12.78□□□□□ -0.36
KARS-203ENST00000562875 ZNF710Q8N1W2 664 aa12.77□□□□□ -0.37
KARS-203ENST00000562875 RBM26Q5T8P6 1007 aaKnown RBP12.76□□□□□ -0.37
KARS-203ENST00000562875 ANO8Q9HCE9 1232 aaPredicted RBP12.76□□□□□ -0.37
KARS-203ENST00000562875 SNPHO15079 494 aa12.75□□□□□ -0.37
KARS-203ENST00000562875 HRCP23327 699 aa12.75□□□□□ -0.37
KARS-203ENST00000562875 ARSIQ5FYB1 569 aa12.75□□□□□ -0.37
KARS-203ENST00000562875 RSF1Q96T23 1441 aaPredicted RBP12.74□□□□□ -0.37
KARS-203ENST00000562875 ZSWIM6Q9HCJ5 1215 aa12.74□□□□□ -0.37
KARS-203ENST00000562875 KHSRPQ92945 711 aaKnown RBP eCLIP12.73□□□□□ -0.37
KARS-203ENST00000562875 NUDT7P0C024 238 aa12.72□□□□□ -0.37
KARS-203ENST00000562875 GPR153Q6NV75 609 aa12.71□□□□□ -0.37
KARS-203ENST00000562875 KDM4FA0A1W2PPD8 638 aa12.7□□□□□ -0.38
KARS-203ENST00000562875 OSBPP22059 807 aa12.7□□□□□ -0.38
KARS-203ENST00000562875 GPIHBP1Q8IV16 184 aa12.7□□□□□ -0.38
KARS-203ENST00000562875 ZC3H15Q8WU90 426 aaKnown RBP12.7□□□□□ -0.38
KARS-203ENST00000562875 PHF14O94880 888 aa12.67□□□□□ -0.38
KARS-203ENST00000562875 EPAS1Q99814 870 aa12.65□□□□□ -0.38
KARS-203ENST00000562875 PCGF6Q9BYE7 350 aa12.65□□□□□ -0.38
KARS-203ENST00000562875 PCDHGA10Q9Y5H3 936 aa12.65□□□□□ -0.38
KARS-203ENST00000562875 NUTM2FA1L443 756 aa12.64□□□□□ -0.39
KARS-203ENST00000562875 PRIM1P49642 420 aaKnown RBP12.64□□□□□ -0.39
KARS-203ENST00000562875 JPH4Q96JJ6 628 aa12.64□□□□□ -0.39
KARS-203ENST00000562875 BAZ1AQ9NRL2 1556 aaPredicted RBP12.62□□□□□ -0.39
KARS-203ENST00000562875 HOXB1P14653 301 aaPredicted RBP12.62□□□□□ -0.39
KARS-203ENST00000562875 FOSBP53539 338 aa12.62□□□□□ -0.39
KARS-203ENST00000562875 TYW1BQ6NUM6 668 aa12.62□□□□□ -0.39
KARS-203ENST00000562875 ZNF454Q8N9F8 522 aa12.62□□□□□ -0.39
KARS-203ENST00000562875 RBM33Q96EV2 1170 aaKnown RBP12.61□□□□□ -0.39
KARS-203ENST00000562875 EN1Q05925 392 aaPredicted RBP12.6□□□□□ -0.39
KARS-203ENST00000562875 LHX6Q9UPM6 363 aa12.6□□□□□ -0.39
KARS-203ENST00000562875 MAP3K7O43318 606 aa12.59□□□□□ -0.39
KARS-203ENST00000562875 ZMYND10O75800 440 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms